| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 236 | C→G | 8.3% | T16R (ACA→AGA) ‡ | thrL → | thr operon leader peptide |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 236 | 0 | C | G | 8.3% | 325.5 / 18.9 | 108 | T16R (ACA→AGA) ‡ | thrL | thr operon leader peptide |
| Reads supporting (aligned to +/- strand): ref base C (47/51); new base G (3/6); total (51/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.60e-02 | |||||||||||
Only 100 of 110 total aligned reads displayed.
GAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCAAATGCAGAACGT > NC_000913/93‑384 | gAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTaa < 2:1650679/150‑1 (MQ=255) aGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAAc < 1:469441/150‑1 (MQ=255) gTAAAATAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACAACCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTaaag > 1:50389/1‑148 (MQ=255) tAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTCCAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACgg < 1:1359835/150‑1 (MQ=255) aaaTTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCGTTACCTGTGGTAATGGt < 1:1458839/150‑1 (MQ=255) aaaTTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGt > 2:1346276/1‑150 (MQ=255) aaaTTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACAACCATTACCACCACCATCACCATTACCACAGGTAACGGt > 2:1042639/1‑150 (MQ=255) aaTTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTg < 2:449058/150‑1 (MQ=255) aTTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGc < 2:1523711/150‑1 (MQ=255) ttAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCg < 2:456338/150‑1 (MQ=255) ttAAAATTTTATTGACTTAGGTAACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACAAAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCg < 2:325961/150‑1 (MQ=255) tAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCgg > 1:1098441/1‑150 (MQ=255) aaagtatttAGTGACCTAAGTCAATAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCgg > 2:823668/7‑150 (MQ=255) aaaTTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCGTTACCTGTGGTAATGGTgatggt < 1:472417/150‑6 (MQ=255) aaaTTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCGTTACCTGTGGTAATGGTgatggt < 1:151751/150‑6 (MQ=255) aaTTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCGTTACCTGTGGTAATGGTgatggtg < 2:1154501/150‑7 (MQ=255) aTTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCGTTACCTGTGGTAATGGTgatggtgg < 1:1438047/150‑8 (MQ=255) ttATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGAcg < 2:352459/150‑1 (MQ=255) gACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTAc > 1:435786/1‑150 (MQ=255) aCTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGAAACGGTGCGGGCTGACGCGTACa < 2:386667/150‑1 (MQ=255) gTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAac < 2:825606/150‑1 (MQ=255) gTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAac > 1:1662501/1‑150 (MQ=255) gTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAac < 1:1126133/150‑1 (MQ=255) gTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAac > 2:178938/1‑150 (MQ=255) aCTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAAcaca > 2:794818/1‑150 (MQ=255) tAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑a < 1:1013869/150‑1 (MQ=255) aaaTACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑aa > 2:1359183/1‑150 (MQ=255) aCTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑aaaaaa > 2:1467998/1‑150 (MQ=255) aCTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑aaaaaa > 1:1178123/1‑150 (MQ=255) cTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAg < 2:1178123/150‑1 (MQ=255) tttAACCAATATAGGCTTAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGc < 2:160668/150‑1 (MQ=255) ttAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGcc < 1:823668/150‑1 (MQ=255) aCCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGc > 2:1248978/1‑150 (MQ=255) aCCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGc < 2:1063421/150‑1 (MQ=255) aCCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGc > 1:146419/1‑150 (MQ=255) cAATATAGGCATAGCGCCCAGACAGATAAAAAATACCGAGTACACAACATCCATGAAACGAAATACCACCAACATTACCACAACCATCACCATTTCCACAGGGAACGGTGCGGCATGACGCGAACAGGAAGCACAG‑AACAAAACCCCCAc > 1:1142372/1‑150 (MQ=255) taGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGAc > 1:993145/1‑150 (MQ=255) gCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑Gt > 1:180572/1‑150 (MQ=255) tAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCg > 2:864179/1‑150 (MQ=255) aGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCgg < 1:335805/150‑1 (MQ=255) gcgcACAGACAGATAAAAATTACAGAGTACACAACATCGATGAAACGCATAAGCACCACCATTACCACCACCATCACCATTACCACAGGTATCGCGGGGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCggg < 2:1406653/150‑1 (MQ=255) gcgcACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCggg < 2:1638288/150‑1 (MQ=255) cgcACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCA‑CTGTCAGGTGCGGGc < 2:1098441/150‑1 (MQ=255) cgcACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCA‑CTGTCAGGTGCGGGc < 1:1467998/150‑1 (MQ=255) gcACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑t > 1:1422712/1‑150 (MQ=255) gcACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCA‑CTGTCAGGTGCGGGC‑t < 1:1617580/150‑1 (MQ=255) cacaGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑tt < 2:1037534/150‑1 (MQ=255) acagacagATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCA‑CTGTCAGGTGCGGGC‑ttt < 1:705800/150‑1 (MQ=255) agacagaTAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑ttt‑tt < 1:1615715/150‑1 (MQ=255) gacagaTAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCCGACA‑GTGCGGGC‑ttt‑ttt > 1:1468242/1‑150 (MQ=255) acagaTAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGTTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑ttt‑tttt < 1:864179/150‑1 (MQ=255) cagaTAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCGGACA‑GTGCGGGC‑ttt‑ttttt > 1:186766/1‑150 (MQ=255) attaTAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCA‑CTGTCAGGTGCGGGC‑ttt‑tttct < 2:1662501/147‑3 (MQ=39) agaTAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑ttt‑tttttt < 2:1183107/150‑1 (MQ=255) agaTAAAAATTACAGAGGACTCAACATCCATGAACCGCATTAGCACCACCATAACCACCACCATCACCATAACCACAGGTAACGGTGCGGGCTGAAGCGTACAGGAAACACAGAAAAAAAGCCCGCA‑CTGTCAGGTGCGGGC‑ttt‑tttct < 2:278534/150‑3 (MQ=37) gaTAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTc > 2:875165/1‑150 (MQ=255) aTAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCA‑CTGTCAGGTGCGGGC‑ttt‑tttctgtg < 2:149740/150‑6 (MQ=39) tAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCgc > 1:941855/1‑149 (MQ=255) aaaaaTTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGATACACCG‑AAAAAAGCCCGCA‑CTGTCAGGTGCGGGC‑ttt‑tttctgtgtt < 1:271591/150‑8 (MQ=38) aaaaaTTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGAc < 1:592041/150‑1 (MQ=255) aaaaTTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATAACCACAGGTAACGGTGCGGGCTGACGGGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GAGCGGGC‑TTT‑TTTTTTCGagc > 2:837152/1‑148 (MQ=255) cAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTa < 1:1346276/150‑1 (MQ=255) cAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTa < 1:1462508/150‑1 (MQ=255) tACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCAACACCATTACCACAGGTAACGGTGCGGGCTGACGCGAACAGGAAACACAG‑AAAAAAGCCCGCACATGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGATAACCAg > 1:88768/1‑150 (MQ=255) cacaACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGt > 1:1481330/1‑150 (MQ=255) caTCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTaacaa > 1:790084/1‑150 (MQ=255) caTCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGGAACGAGGTaacaa > 2:852408/1‑150 (MQ=255) aacATTAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAT‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAAcc < 2:1439670/148‑1 (MQ=255) ccATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCa < 2:701122/150‑1 (MQ=255) tGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCCACCAAAGGTACCGAGGTAACAACCATGc > 1:313501/1‑150 (MQ=255) aaCGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAg < 1:178938/150‑1 (MQ=255) cGCATTAGCACCACCATTACCACCACCATCACCATTACCTCAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACTG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAgtg < 2:1408212/150‑1 (MQ=255) tAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGaa < 1:1665723/150‑1 (MQ=255) aGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAg > 1:789747/1‑150 (MQ=255) gCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGt > 2:1501786/1‑150 (MQ=255) accaccATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGCCGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTc > 2:1525902/1‑150 (MQ=255) caaccaTTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGATACACTG‑AAAAAAGGCGGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCATAGGTAACGAGGTAACAAGCATGCGAGTGATGAAGTTcg < 2:939580/148‑1 (MQ=255) caccaTTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTcgg < 1:1680191/150‑1 (MQ=255) ccaTTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACCACCATGCGAGTGGTGAAGTTcggcg > 2:1205127/1‑150 (MQ=255) ttACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTa < 1:1359/150‑1 (MQ=255) ttACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTa < 1:1359183/150‑1 (MQ=255) ttACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTa < 2:568944/150‑1 (MQ=255) tACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTAc < 1:794818/150‑1 (MQ=255) tACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTAc < 2:1422712/150‑1 (MQ=255) ccaccaccaTCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACAt > 1:870123/1‑150 (MQ=255) caaccaccaTCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCACGCACCTGACA‑GTGGGGGC‑TGT‑TTTTTTCGACCAAAGGTAAAGAGGTAACACCACTGCGAGTTTTGAAGTTAGGCGGTACAt > 2:1280236/3‑150 (MQ=255) caccaccaTAACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACAAAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATc < 2:88768/150‑1 (MQ=255) ccaccaTCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAg > 1:931054/1‑150 (MQ=255) ccgcaccgtTACCTGTGGTAATGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑ATATTTCGACCAAAGGTAACGATGTAACAACCATGCGAGTGTTGAAGTTAGGCGGTACAACAGTGGc > 2:589140/4‑150 (MQ=255) catcaccatTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGc > 1:1573245/1‑150 (MQ=255) cgcaccgtTACCTGTGGTAATGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCa > 2:1243236/3‑150 (MQ=255) caccgtTACCTGTGGTAATGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTTGTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCaa > 1:1109522/1‑150 (MQ=255) caatACAACAGGTAACGGTCCGGGCTGACGGGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGCTTTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCATTGGCAAATg < 2:878638/147‑1 (MQ=255) atTACCACAGGTAACGGTGCGGGCTGACGGGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCAAATGCa < 1:1609719/150‑1 (MQ=255) aCCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCAAATGCAGaa > 1:762714/1‑150 (MQ=255) aCCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAAAAAACATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCAAATGCAGaa > 1:562923/1‑150 (MQ=255) aCCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGAAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCAAATTAAGaa > 1:762716/1‑150 (MQ=255) aCCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TGT‑TTTTTTCGACCAAAGGTAACGAGTGTACAACCATGCGAGTGTTGAAGTTGGGGGGTACATAAGTGGCAAATGCAGaa > 2:1089475/1‑150 (MQ=255) ccACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCAAATGCAGAAc > 1:1507716/1‑150 (MQ=255) acaGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCAAATACAGAACGt < 2:1483218/150‑1 (MQ=255) | GAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAG‑AAAAAAGCCCGCACCTGACA‑GTGCGGGC‑TTT‑TTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCAAATGCAGAACGT > NC_000913/93‑384 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |