| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,074,691 | C→G | 6.5% | intergenic (+33/‑88) | flu → / → yeeR | CP4‑44 prophage; antigen 43 (Ag43) phase‑variable biofilm formation autotransporter/CP4‑44 prophage; putative membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,074,691 | 0 | C | G | 6.5% | 335.2 / 10.6 | 117 | intergenic (+33/‑88) | flu/yeeR | CP4‑44 prophage; antigen 43 (Ag43) phase‑variable biofilm formation autotransporter/CP4‑44 prophage; putative membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (52/55); new base G (4/4); total (58/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.36e-01 | |||||||||||
Only 100 of 123 total aligned reads displayed.
GAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGCCATTCTTCGCCTT > NC_000913/2074542‑2074838 | aGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTcatcat > 2:899516/1‑150 (MQ=255) cccGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGa < 1:96318/150‑1 (MQ=255) gccGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATGATGACCGGGa < 1:422497/149‑1 (MQ=255) ccGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATGATGACCGGGAc < 1:1117767/150‑1 (MQ=255) cGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATGATGACCGGGAcc < 1:222546/150‑1 (MQ=255) ggAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGCCC‑Cg > 2:452662/1‑150 (MQ=255) ggAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑Cg < 2:1533096/150‑1 (MQ=255) aaTATCACCGTGGGCGGTCAGGCCGGTTATGCCCACTTCGCCTTCGGCAGCAGCGCTTAAGGTTATAACGTTCAGGCCACTCTGAATGTGACCTTCTGACAGAACCATGGCCGGTCTGTGGG‑CCCGGTCATCATCACCGGGACC‑CGGAcc < 2:828219/150‑1 (MQ=255) atCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGCCC‑CGGCCCCgc > 1:565369/1‑150 (MQ=255) aCCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCa < 2:1025693/150‑1 (MQ=255) cccTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCaa > 2:853631/1‑150 (MQ=255) gggCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGa < 2:965171/150‑1 (MQ=255) gggCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGa < 2:119262/150‑1 (MQ=255) ggCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGAt > 2:1070772/1‑150 (MQ=255) gCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGCTc > 2:545861/1‑150 (MQ=255) gCGTGCAGGCCGGTTATGCCCACCGCGTCAGCGGCAGCCGCGCTGAAGGTTATAACGGTCAGGCCACACTCAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGC‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATc < 2:656677/150‑1 (MQ=255) gTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCtt > 2:633420/1‑150 (MQ=255) gTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCACCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCtt > 1:202516/1‑150 (MQ=255) aGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAAc < 2:480745/150‑1 (MQ=255) ggCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGCCCGGCCCCACCGGTCTTAAACg > 1:1548845/1‑150 (MQ=255) ggCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACg < 1:988842/150‑1 (MQ=255) ggCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACg > 2:1581869/1‑150 (MQ=255) gCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGc > 1:1115907/1‑150 (MQ=255) ccGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGGCAGCATGACCGGGACC‑CGGACCGGCGCCACGGATCTTCAACGcc > 1:1252190/1‑150 (MQ=255) cGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCca < 2:1625896/150‑1 (MQ=255) gTTATGCCCACAGCGCCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCcaca < 1:349810/150‑1 (MQ=255) aTGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTc < 1:466633/150‑1 (MQ=255) gCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGCCCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGCCCGGCGCAACGGATCTTCAACGCCCCATTCGc > 2:1440758/1‑150 (MQ=255) gCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGCCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGc > 1:1053491/1‑150 (MQ=255) cccACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCt < 2:313895/150‑1 (MQ=255) cccACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCt > 1:18045/1‑150 (MQ=255) ccACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGCCC‑CGGACCGGGGCAGCGGGTCTTCGACGGCACATTGGCTg > 2:1588291/1‑150 (MQ=255) ccACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTg > 2:1003936/1‑150 (MQ=255) ccACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCAGACAGAACCATCGCCACTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGAGCTTCAACGCCACATTCCCTg > 1:1111610/1‑150 (MQ=255) cacaGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCCCATTCGCTgg > 2:369819/1‑150 (MQ=255) acaGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGc < 1:1039724/150‑1 (MQ=255) gCGTCAGCGGCAGCAGCGCTTAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATTGCCTCTCTGTGGG‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCAtt < 1:774243/150‑1 (MQ=255) cGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGATC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTa < 1:736290/150‑1 (MQ=255) tCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACATAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAAc < 1:610219/150‑1 (MQ=255) tCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCTACGGATCTTCAACGACACATTCGCTGGCATTaaa > 2:1165614/1‑149 (MQ=255) tCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAAc > 2:1151596/1‑150 (MQ=255) aGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACaa > 1:1223820/1‑150 (MQ=255) gcagcaGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAAc < 1:37788/150‑1 (MQ=255) cagcGCTGAAGGTTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGa < 2:1596943/150‑1 (MQ=255) cgcTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGatat > 1:1155709/1‑150 (MQ=255) cgcTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGatat > 1:20668/1‑150 (MQ=255) ttataAGGGTCTGGCCACACTTAATGTTACCTTCTCACATAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACgg < 2:565369/149‑1 (MQ=255) ttaaaagggTCAGCCCAAACTTATTGTGACCTTCTCACAGAACCATCGCCTCTATGTGGC‑CCCGGTCATCATCACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACgg < 1:736255/143‑1 (MQ=255) tataACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGa < 1:975604/150‑1 (MQ=255) ataACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCAGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACAGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGAAATTCATCACGGAg > 2:1012293/1‑150 (MQ=255) taACGGTCAGGCCACACTGAATGGGCCCTTCTGCCCGAACCTCCCCCTCTCGGTGGT‑CCCGGGCATCATGCCCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGt < 1:823499/150‑1 (MQ=255) aaCGGTCAGGCCACACTGAATCTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGGCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTg < 2:1115888/150‑1 (MQ=255) cGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCCACGGATCTTCAACGCCACATTAGCTGGCATTAACAATTACATGATATTCATCCCGGCGTGAc > 1:518068/1‑150 (MQ=255) cAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATg < 1:304956/150‑1 (MQ=255) cacaCTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACa > 2:1175134/1‑150 (MQ=255) cacaCTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACa < 1:1070772/150‑1 (MQ=255) caaagttaaTGTGACCTTCTCACAGAACCATCGCCTCTCTGGGGC‑CCCGGTCATCTTGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACa < 1:630555/143‑1 (MQ=255) cacTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATAATGACCGGGACC‑CGGACCGGCGCAACGGATCTTAAACGCCACAATAGCTGGCATTAACAATAACAAGATATTAATCACGGAGTGACTAAGTTACAGa > 1:1514960/1‑150 (MQ=255) gAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGt > 2:1194495/1‑150 (MQ=255) tgttACCTTCTGACTGAACCATCGCCTCTCTGTGTG‑CCCGGTCATCATTACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCgg < 1:853631/150‑1 (MQ=255) gtgACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGgc > 2:835427/1‑150 (MQ=255) tgACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGgcg > 1:746126/1‑150 (MQ=255) tgACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGgcg > 2:1641928/1‑150 (MQ=255) tgACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGgcg < 2:1620637/150‑1 (MQ=255) gACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCCGGTAAACATGCCCGGGACC‑CGACCCGGCCCAACGGTTATTCACCCCCCCATTCCCGGCCATTAACAATAACATAATATTCAACACGGAGGGACTATGTTAAAGATAGACGgcc > 2:1631713/1‑149 (MQ=255) gACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGgcgc < 2:72824/150‑1 (MQ=255) aCCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATGTTCATCACGGAGTGACTATGTTACAGATAGTCGgcgcg < 2:18045/150‑1 (MQ=255) cTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCt < 1:899516/150‑1 (MQ=255) cTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACAGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCt > 1:1200470/1‑150 (MQ=255) ttCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTg < 1:1175134/150‑1 (MQ=255) tGACAGAACCATCGCGTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATc < 2:411799/150‑1 (MQ=255) gACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATcc > 1:899750/1‑150 (MQ=255) aCAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACGTTCGCTGGCATTAACAATAACATGATATTCATCACGGATTGTCTATGTTTCAGATATTCGGCGCGCTGATCct > 2:444262/1‑150 (MQ=255) aCAGAACCATCGCCTCTCTGTGGT‑CCCGGCCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCct < 2:1053491/150‑1 (MQ=255) cAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCctg > 1:237880/1‑150 (MQ=255) cAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCctg > 1:986191/1‑150 (MQ=255) aaGAACCATCGCCTCTCTGTGTC‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCctg < 2:1332102/149‑1 (MQ=255) gAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCctgct < 2:758015/150‑1 (MQ=255) aaCCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CTGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAAGAATAACATGATATTCCTCACGGAGTGACTATGTTACAGATAGTCGTCGCGCTGATCctgctg < 1:255391/150‑1 (MQ=255) ccATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGAt < 2:900/150‑1 (MQ=255) ccATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGAt > 2:200105/1‑150 (MQ=255) cATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATc > 1:1027855/1‑150 (MQ=255) aTCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑g < 2:1712479/150‑1 (MQ=255) ccgctctGTGGT‑CCCGGTAATCATGACGGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAgg < 1:1099959/147‑1 (MQ=255) ccTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAgg < 2:1115907/150‑1 (MQ=255) ctctctGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGa > 1:474491/1‑150 (MQ=255) ctctctGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGa > 2:1155818/1‑150 (MQ=255) ctctGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGC‑GATCAGCAGGAtc < 2:202516/150‑2 (MQ=255) tgtgGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTgg < 1:36674/150‑2 (MQ=255) gtgGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGcc < 2:1374602/150‑1 (MQ=255) ggT‑CCCGGTCATGATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGCCAt > 2:857897/1‑150 (MQ=255) ggT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGCCAt > 2:1699649/1‑150 (MQ=255) ggT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGCCAt > 2:354478/1‑150 (MQ=255) gT‑CCCGGTCATGATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGCCAtt > 2:1314802/1‑150 (MQ=255) gT‑CCCGGTCATCATGAACGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACAAGATATTCATCACGGAGTGACTATGTTACAGATAGTCTGCGCGCTGATCCAGATGATC‑TCACGATTTGCCAtt > 1:781414/1‑150 (MQ=255) t‑CCCGGTCATGATGACCGGGACCACAGAGAGGCG‑‑ATGGTTCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGCCAttct > 1:119922/1‑150 (MQ=37) cccGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGCCAttct > 1:1527009/1‑150 (MQ=255) ccGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGCCAttctt > 1:1518720/1‑150 (MQ=255) catcatGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGCCATTCTTCGCCt > 2:1394586/1‑150 (MQ=255) atcatGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGCCATTCTTCGCCtt > 2:877248/1‑150 (MQ=255) | GAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGT‑CCCGGTCATCATGACCGGGACC‑CGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGCCATTCTTCGCCTT > NC_000913/2074542‑2074838 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |