Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,725,832 G→T 6.7% intergenic (‑86/+237) kgtP ← / ← rrfG alpha‑ketoglutarate transporter/5S ribosomal RNA of rrnG operon

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,725,8320GT 6.7% 1817.9 / 20.8 539intergenic (‑86/+237)kgtP/rrfGalpha‑ketoglutarate transporter/5S ribosomal RNA of rrnG operon
Reads supporting (aligned to +/- strand):  ref base G (173/314);  new base T (49/3);  total (222/317)
Fisher's exact test for biased strand distribution p-value = 2.52e-17
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 577 total aligned reads displayed.

AAATGCGGCGACGAGTATCACTACTTGTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGA  >  NC_000913/2725683‑2725981
                                                                                                                                                      |                                                                                                                                                     
caaTGCGGCGACGAGTATCACTACTTGTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATttgttg                                                                                                                                                       <  1:8941524/149‑1 (MQ=255)
       gcgACGAGTATCACTACTTGTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCGTTTGTTTA‑TTTTTTTTGTAAAGGTAATATTATACATTTTTTGAATATCa                                                                                                                                                >  1:7552873/1‑150 (MQ=255)
         gacgaGTATCACTACTTGTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGGAAAGGAAATATTATACATTTGTTGCATATCAtt                                                                                                                                              >  2:6017971/1‑150 (MQ=255)
            gaGTATCACTACTTGTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTT‑TTTTTTTTGTTAATGTAATATTATTAATTTTTTTCATATGATTAtt                                                                                                                                           >  2:3835188/1‑149 (MQ=255)
            gaGTATCACTACTTGTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCGTTTGTTTA‑TTTTCTTTGTAAAGGAAATATTATAAATTTGTTTCATATAATTATg                                                                                                                                           >  1:441605/1‑150 (MQ=255)
             aGTATCACTACTTGTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTCTGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGc                                                                                                                                          <  2:10170048/150‑1 (MQ=255)
               tATCACTACTTGTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTTTAAATGTAATATTATACATTTTTTTCATATAATTATTCaa                                                                                                                                        >  1:10524861/1‑150 (MQ=255)
               tATCACTACTTGTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTTTAAAGGAAATATTATACAATTTTTGCATATCAATATGCaa                                                                                                                                        >  2:7476454/1‑150 (MQ=255)
               tATCACTACTTGTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCaa                                                                                                                                        >  2:4650331/1‑150 (MQ=255)
               tATCACTACTTGTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCaa                                                                                                                                        <  2:5540642/150‑1 (MQ=255)
                aTCACTACTTGTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAAc                                                                                                                                       <  1:9531039/150‑1 (MQ=255)
                aTCACTACTTGTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAAc                                                                                                                                       <  1:4633889/150‑1 (MQ=255)
                aTCACTACTTGTCAGTGTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAAc                                                                                                                                       <  1:9886433/150‑1 (MQ=255)
                 tCACTACTTGTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAAcc                                                                                                                                      >  2:8243804/1‑150 (MQ=255)
                   actactTGTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCGTTTGTTTA‑TTTTTTTTTTTAATGAAATATTATAAATTTTTTGAATATAAATATTCAAACtt                                                                                                                                    >  1:1100594/1‑150 (MQ=255)
                    ctactTGTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCCTGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTATTTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATAATGATATGCAAcaaa                                                                                                                                    <  1:9629582/150‑4 (MQ=255)
                     tactTGTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTaa                                                                                                                                  <  2:6388035/150‑1 (MQ=255)
                     tactTGTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTaa                                                                                                                                  <  2:6217374/150‑1 (MQ=255)
                       ctTGTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATAATGATATGCAAcaaatgta                                                                                                                                <  1:8048995/150‑8 (MQ=255)
                        ttGTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCa                                                                                                                               <  1:689079/150‑1 (MQ=255)
                         tGTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCAt                                                                                                                              <  1:9743755/150‑1 (MQ=255)
                          gTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCAGTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAATGAAATATTATACATTTGTTGCATATCATTATTCAACCATAAACATg                                                                                                                             >  2:10472556/1‑150 (MQ=255)
                               tttGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAAttt                                                                                                                        >  2:9071099/1‑150 (MQ=255)
                                ttGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATtta                                                                                                                       <  2:1910120/150‑1 (MQ=255)
                                ttGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATtta                                                                                                                       <  2:313360/150‑1 (MQ=255)
                                ttGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATtta                                                                                                                       <  1:600831/150‑1 (MQ=255)
                                   cTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATttagtt                                                                                                                    <  1:2365043/150‑1 (MQ=255)
                                       cTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCa                                                                                                                <  1:7689517/150‑1 (MQ=255)
                                        tGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAg                                                                                                               <  2:2993418/150‑1 (MQ=255)
                                             gtACAGTACTTTCAGCCATGCCATTAGGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGaaaa                                                                                                          <  2:4334488/149‑1 (MQ=255)
                                               aCAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATg                                                                                                        <  2:2949522/150‑1 (MQ=255)
                                                cAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATgg                                                                                                       <  2:2641200/150‑1 (MQ=255)
                                                 aGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGt                                                                                                      <  1:2599111/150‑1 (MQ=255)
                                                 aGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑ATTTTTTTGTAAAGGAAATATTAAACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAAAGGt                                                                                                      >  2:7158738/1‑150 (MQ=255)
                                                    aCTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTAt                                                                                                   <  2:10694000/150‑1 (MQ=255)
                                                      tttCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAAGTTAGTTAGCAGGAAAATGGTTATTg                                                                                                 >  2:6336470/1‑150 (MQ=255)
                                                      tttCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCGTTTGTTTA‑TTTTTTTTGTAAATGTAAAATTATACATTTTTTGCATATAAATATTCAAACATAACCAAGAATTTATTTTGCATGAAAGAGGGTATTg                                                                                                 >  1:8296754/1‑150 (MQ=255)
                                                       ttCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTTTAAAAGGAAAAATATAAAATTTTTTCATATAATTATTCAAACATAAACAAGTATTTAGTTAGCCGGTAAATGGTTAtttt                                                                                                >  1:2795402/1‑148 (MQ=255)
                                                           gccatgccatTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCATAACCAAGAATTTAGTTAGCAGGAAAATGGTTATTgaggag                                                                                            >  2:7773057/1‑150 (MQ=255)
                                                           gccatgccatTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGGTGCATATCATTATGCAACCTTAACCATTAATTTAGTTAGCAGGCAAATTGTTAGTgtggag                                                                                            >  2:6685032/1‑150 (MQ=255)
                                                            ccatgccatTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGc                                                                                           <  2:8865295/150‑1 (MQ=255)
                                                            ccatgccatTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATAAAATTTTTGCATATCAATATTCAAACATAACCATGAATTTAGTTAGCAGGAAAATGGTTATTgaggatc                                                                                           >  2:10358394/1‑148 (MQ=255)
                                                             catgccatTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCGTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCt                                                                                          >  2:5345118/1‑150 (MQ=255)
                                                               tgccatTATGTCTCCTGCCGTACTCCGATGCTTGTGTCGGTCGTTTTTGTTTA‑TGTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCCTGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTa                                                                                        <  2:2334070/150‑1 (MQ=255)
                                                               tgccatTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCGTTTGTTTT‑TTTTTTTTTTAAAAGGAAAATTATAAAATTTTTTGAAATAAATAATCAACCATAACCCATAAATTAGTTATCAGGGAAAAGGGTTTTTAGGGGCTTa                                                                                        >  1:10008261/1‑150 (MQ=255)
                                                                 ccatTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAg                                                                                      <  2:375562/150‑1 (MQ=255)
                                                                 ccatTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAg                                                                                      <  2:6831261/150‑1 (MQ=255)
                                                                       tGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCGTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAAACTTAACCATGAATTTAGTTAGCAGGAAAATTGGTATTGAGGGGCTTAAGGATaaa                                                                                >  2:2039458/1‑150 (MQ=255)
                                                                           tcCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTTTTTCATATAATTATTCAACCTTAACCATTAATTTAGTTATCAGGAAAATGGTTATTTAGGGGCTTAAGGATAAATTTc                                                                            >  2:9303645/1‑150 (MQ=255)
                                                                            ccTGCCGTAATCCGATTCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTCGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCt                                                                           <  2:987946/150‑1 (MQ=255)
                                                                            ccTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCt                                                                           <  1:7308272/150‑1 (MQ=255)
                                                                             cTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTg                                                                          <  2:8622086/150‑1 (MQ=255)
                                                                                 cGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTaa                                                                      <  2:10508309/150‑1 (MQ=255)
                                                                                 cGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTaa                                                                      <  2:706248/150‑1 (MQ=255)
                                                                                 cGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTaa                                                                      <  1:6640262/150‑1 (MQ=255)
                                                                                    aaTCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAagga                                                                   <  1:6060764/150‑1 (MQ=255)
                                                                                     aTCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAaggag                                                                  <  2:7358932/150‑1 (MQ=255)
                                                                                     aTCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAaggag                                                                  <  1:8769410/150‑1 (MQ=255)
                                                                                       ccGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAggagga                                                                <  2:1335362/150‑1 (MQ=255)
                                                                                             cTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTa                                                          <  2:4584126/150‑1 (MQ=255)
                                                                                              ttttGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTAt                                                         <  1:5028377/150‑1 (MQ=255)
                                                                                                     ggtcgCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTg                                                  <  1:2949884/150‑1 (MQ=255)
                                                                                                      gtcgCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTTCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCACGAAAATGGTTATTGAGGATCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTgg                                                 <  1:10235423/150‑1 (MQ=255)
                                                                                                       tcgCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTggg                                                <  2:4219962/150‑1 (MQ=255)
                                                                                                         gCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCa                                              >  2:1737078/1‑150 (MQ=255)
                                                                                                          cTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCaa                                             <  1:4843154/150‑1 (MQ=255)
                                                                                                          cTTTTGTTTA‑TTTTTATTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCaa                                             >  2:8424709/1‑150 (MQ=255)
                                                                                                           ttttGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAg                                            >  2:8779355/1‑150 (MQ=255)
                                                                                                             ttGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGtt                                          >  2:9174335/1‑150 (MQ=255)
                                                                                                                tttA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTggg                                       >  2:3365177/1‑150 (MQ=255)
                                                                                                                tttA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTggg                                       >  2:576250/1‑150 (MQ=255)
                                                                                                                tttA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTggg                                       <  2:5090218/150‑1 (MQ=255)
                                                                                                                 ttA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTgggg                                      <  1:1634464/150‑1 (MQ=255)
                                                                                                                   a‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTAt                                                         <  1:5688214/129‑1 (MQ=255)
                                                                                                                   a‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATgg                                                       <  2:968138/131‑1 (MQ=255)
                                                                                                                   a‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGaa                                    >  1:6248120/1‑150 (MQ=255)
                                                                                                                   a‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGaa                                    >  1:3509008/1‑150 (MQ=255)
                                                                                                                     ttttttttGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAg                                   >  1:2173139/1‑150 (MQ=255)
                                                                                                                      tttttttGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGc                                  >  1:4364991/1‑150 (MQ=255)
                                                                                                                        tttttGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCg                                >  1:5813875/1‑150 (MQ=255)
                                                                                                                           ttGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTAt                             <  1:9071099/150‑1 (MQ=255)
                                                                                                                              tAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCg                          >  1:7864264/1‑150 (MQ=255)
                                                                                                                              tAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCg                          >  2:656249/1‑150 (MQ=255)
                                                                                                                               aaaGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGt                         <  2:3528892/150‑1 (MQ=255)
                                                                                                                                 aGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTAtt                                                                                                  >  2:1668222/1‑75 (MQ=255)
                                                                                                                                  ggAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGc                      >  2:1093619/1‑150 (MQ=255)
                                                                                                                                       tattatACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAAt                 <  1:4183866/150‑1 (MQ=255)
                                                                                                                                        attatACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATc                <  1:5345118/150‑1 (MQ=255)
                                                                                                                                         ttatACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCt               >  1:10736142/1‑150 (MQ=255)
                                                                                                                                           ataCATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTgg             <  1:3292365/150‑1 (MQ=255)
                                                                                                                                             aCATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCa           <  1:9260015/150‑1 (MQ=255)
                                                                                                                                                tttGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCatat        >  1:8519457/1‑150 (MQ=255)
                                                                                                                                                tttGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCatat        >  1:9965244/1‑150 (MQ=255)
                                                                                                                                                    ttgCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATCTGTgg    >  1:1769346/1‑150 (MQ=255)
                                                                                                                                                    ttgCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTgg    >  1:5203268/1‑150 (MQ=255)
                                                                                                                                                    ttgCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTgg    <  1:10358997/150‑1 (MQ=255)
                                                                                                                                                    ttgCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTgg    <  1:7070976/150‑1 (MQ=255)
                                                                                                                                                      gCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGa  <  2:7996480/150‑1 (MQ=255)
                                                                                                                                                      gCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGa  >  2:242479/1‑150 (MQ=255)
                                                                                                                                                      gCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGa  >  1:3132439/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
AAATGCGGCGACGAGTATCACTACTTGTCAGTTTGCTGTCTGCCGTTACAGTACTTTCAGCCATGCCATTATGTCTCCTGCCGTAATCCGATGCTTTTGTCGGTCGCTTTTGTTTA‑TTTTTTTTGTAAAGGAAATATTATACATTTGTTGCATATCATTATGCAACCTTAACCATGAATTTAGTTAGCAGGAAAATGGTTATTGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGA  >  NC_000913/2725683‑2725981

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑