| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,229,177 | A→C | 15.3% | intergenic (+112/+261) | yohP → / ← dusC | uncharacterized protein/tRNA‑dihydrouridine synthase C |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,229,177 | 0 | A | C | 15.3% | 191.9 / 3.5 | 115 | intergenic (+112/+261) | yohP/dusC | uncharacterized protein/tRNA‑dihydrouridine synthase C |
| Reads supporting (aligned to +/- strand): ref base A (25/60); new base C (14/4); total (42/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.61e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 121 total aligned reads displayed.
TGGTGGTGACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATG > NC_000913/2229031‑2229326 | tggtggTGACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑Aggg < 1:3487506/150‑1 (MQ=255)tggtggTGACTGGCGTAATTAAGATGATATTTTAAAATTAAATAATGACATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑Aggg < 2:2822836/150‑1 (MQ=255) ggtggtGACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑Cgggg > 1:1165052/1‑150 (MQ=255) gtggtgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑Aggggg > 1:3778710/1‑150 (MQ=255) gtggtgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑Aggggg > 1:793234/1‑150 (MQ=255) tggtgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGTATATTTCAGTCTGTCTTCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCgg‑ggggggg > 2:238890/1‑149 (MQ=255) tggtgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGggc < 1:336247/150‑1 (MQ=255) tggtgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGggc < 1:3831435/150‑1 (MQ=255) tggtgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGggc < 1:3831526/150‑1 (MQ=255) tggtgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATAGTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCgg‑ggggggg > 2:1890189/1‑149 (MQ=255) ggtgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGggcg > 1:2313396/1‑150 (MQ=255) gtgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGggcgg < 2:2451764/150‑1 (MQ=255) gtgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGggcgg < 2:1769875/150‑1 (MQ=255) gtgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGggcgg < 1:2068420/150‑1 (MQ=255) tgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑CGGGggcggg > 1:2545903/1‑149 (MQ=255) tgACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑CGGGggcggg > 1:2545822/1‑149 (MQ=255) aCTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGG‑GGGGggcgggcc > 2:1215888/1‑147 (MQ=255) cTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCaa < 2:2460207/150‑1 (MQ=255) tGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCaaa > 2:1318415/1‑149 (MQ=255) tGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAAt < 1:2057185/150‑1 (MQ=255) tGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAAt < 1:2056440/150‑1 (MQ=255) tGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAAt > 2:3615289/1‑150 (MQ=255) tGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTATCTCATCCTGTTGCGATCCTGTCATGTGCATAGCTTCATATAATAACTTGCGCAAGGAGCGCGCAAGGGGGGGGCCaa > 2:365962/1‑150 (MQ=255) ggCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATc < 1:1534156/150‑1 (MQ=255) gCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGg‑ggggggggggcccacc > 2:1836009/1‑143 (MQ=255) gCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGG‑CGGGGGGGGcccaaag > 1:2508043/1‑145 (MQ=255) gTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATcgcc < 2:682154/150‑1 (MQ=255) aTTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATcgccgc < 1:2034652/150‑1 (MQ=255) aTTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATcgccgc < 1:1129539/150‑1 (MQ=255) ttAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAAAcgccgccc > 2:2627634/1‑149 (MQ=255) tattatatTTTAAATTTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTAATATAATCACTGGCGCAAGGAGCGCGC‑TGGGGGCGGCCAATCGCCGCCGcccc < 1:3970425/146‑1 (MQ=255) tatgatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGcccc < 1:3970417/149‑1 (MQ=255) gatgatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGG‑CGGGGGCGGGCCAACGcccccccccc > 2:1847186/1‑150 (MQ=255) gatgatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑CCGGGGGGGCCAAACGcccccccccc > 1:1279085/1‑150 (MQ=39) gatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGG‑CGGGGGCGGGCCAAAGCcccccccccccg > 1:1098246/1‑148 (MQ=255) gatATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑CGGGGGCGGCCAAAAgcccccgcccccag > 2:2083568/1‑148 (MQ=255) atatTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAAAAGCCGccccccccacc > 1:2702901/1‑147 (MQ=255) ttttttAAAATTAATTATTGTCATCTGGTCCGAAAATAACGTTAATTTTTCTGTCTCTCTTCGTGTTGCGCTCCTTTATTGTGCTTTGCTTCATATAATCACTGGCGCATGGTGCGGGC‑TGGGGGCGGCCAATCGCCGCCGCCCCCTggg < 1:2099801/148‑3 (MQ=21) tatTTTAAAATTAATTAATGTAATCAGGTCCCAAAATAACGAGAATATTACAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCa < 1:3601677/150‑1 (MQ=255) ttttAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑CGGGGGGGGCCCAACcccccccccccccccccc > 2:3183586/1‑144 (MQ=255) aaaTTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑CGGGGGCGGGCCCTCGCCCCCCCCCCCAcccccccccg > 1:302138/1‑148 (MQ=38) ttaatGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTgg < 2:1816496/150‑1 (MQ=255) tGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGTGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGaa < 2:1447020/150‑1 (MQ=255) tGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGaa < 2:1483714/150‑1 (MQ=255) gTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAAACGCCCCCGCCCCCACCACCCCCCGGCCAAGGCGAAc > 2:2049454/1‑150 (MQ=37) atcaGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCAGCACCCCCCGGCGCAGGCGAACaaa > 2:3775858/1‑150 (MQ=255) aGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATAGCCCCCGCCCCCAGCACCCCCGGGCTCAGGCGGAAAAAATc > 2:1002669/1‑150 (MQ=25) gagaATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑CGGGGGCGGCCAATAGCCCCCGCCCCCAGCACCCCCCGGCTCAGGCGAACAAAAACGCCCCGGCGCGGTGc > 2:2079169/1‑150 (MQ=21) gagaATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATAGCCCCCCCCCCCAGCACCCCCCGGCAATGGCGAACAAAAACCCCCCAGCGCGGTGc > 2:2079143/1‑150 (MQ=21) tctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCCCAAGCCGCCGCCCCCAGCCCCCCCCCGCTCGGGCGCACAAAAAAGCCGCCGCGCGGGGGCCGCGGCGTATcccc > 2:1235576/1‑149 (MQ=18) tctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAAGCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCt < 2:1165052/150‑1 (MQ=255) tctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑ACGGGGCGGCCAAAAGCCCCCCCCCCCAGCCCCCCCCCGCTCAGGCGAACAAAAAAGCCCCTGCGCGGTGCCCACGGCGTATccca > 2:1338482/1‑149 (MQ=18) tcATCGTGTTGCGCTCCTTTCTTGTGCTTTGATTAATATAATCAGTGGCGCATGGAGCGCGC‑TGGGGGCGGCCATTCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTa < 1:11117/150‑1 (MQ=14) tcATCCTGTTGGGCTCCTGTCATGTGCTTTGCTTCATATAATCAGTGGCGCATGGAGCGCGC‑AGGGGGGGGCCAATCGCCGCGGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTa < 2:1048217/150‑1 (MQ=17) tcATCCTGTTGCGCTCCTGTCTGGTGCATTGCTTCATAAAAACACGGGCGCACGGCGCGCGC‑CGGGGGCGGCCAAGCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTa < 1:11273/150‑1 (MQ=17) tcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTa < 2:3294603/150‑1 (MQ=255) tcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTa < 2:1222559/150‑1 (MQ=255) tGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑ACGGGGCGGCCCAACCCCGCCCCCCCCAGCACCCCCCGGCTCTGGCGGACAAAAAAGCCCCGGCGCGGTGCCCTCGGCGTATCCCATAAGGCTa > 2:3344427/1‑150 (MQ=17) ttGCGCTCCTGTCATGTGCATTGCTTCATATAATCAGTGGCGCAAGGAGCGCGC‑CGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTAcc < 2:1888559/150‑1 (MQ=255) gcTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑TGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGt < 1:1190052/150‑1 (MQ=255) gcTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGt < 1:4026018/150‑1 (MQ=255) gtGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCggg < 2:3865411/149‑1 (MQ=255) tCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCCAACGCCGCCGCCCCCAGCAACCCCCGGCTCATGCGGACAAAAACGCCGCGGCCCGGTGCCCACCGCGTATACCATACCGCGACCCGGGCGGgcgc > 2:641159/1‑150 (MQ=12) cATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGcgcg < 1:2329487/150‑1 (MQ=255) aTGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGa < 2:3778710/150‑1 (MQ=255) aTGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAAACGCCGCCGCCCCCAGCACCCCCCGGCTCAGGCGAACAAAATAGCCCCTGCGCGGTGCCCTCGGCGTATACCATACGGCTACCCGGTCGGGCGCGa > 2:3423724/1‑150 (MQ=17) gtgCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAgg < 1:1409930/150‑1 (MQ=255) gtgCATTGCTTAATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAgg < 1:3864807/150‑1 (MQ=255) tgCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAAACGCCCCCCCCCCCCCCACCCCCCCGCGCGGGCGAACAAAAACGCCCCGGCGCGGGGCCCGCCGCGGATACCGTACGGCGACCCGGGCGGgcgcccggg > 2:3315888/1‑145 (MQ=9) gCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCAGCACCCCCCGGCGCTGGCGAACAAAAACGCCGCGGCGCGGGGCCCACGGCGTAAACCCTACGGCTACCGGGTCGGGCGCGGGGTa > 2:347240/1‑150 (MQ=14) cATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTaa < 2:793234/150‑1 (MQ=255) cATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTaa < 2:2435922/150‑1 (MQ=255) tGCTTCATATAATCACTGGCGCACGGAGCGCGC‑CGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACAt < 1:1211712/150‑1 (MQ=255) cTTCATATAATCACTGGCGCCAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACACAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATcc < 2:3891565/150‑1 (MQ=255) cTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATcc < 2:162083/150‑1 (MQ=40) cTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATcc < 2:3675979/150‑1 (MQ=40) taatatAATCACTGGCGCACGGTGCGCGC‑TGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCt < 1:3823971/148‑1 (MQ=255) tCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCt < 1:1151994/150‑1 (MQ=39) tCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCt < 1:2977541/150‑1 (MQ=39) tCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCt < 1:1836009/150‑1 (MQ=39) tCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCt < 2:3892701/150‑1 (MQ=39) ataATCACTGGCGCATGGAGCGCGC‑CGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTaa < 1:2947827/150‑1 (MQ=25) ataATCACTGGCGCAAGGAGCGCGC‑TGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTaa < 1:3183586/150‑1 (MQ=25) cACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAAcgc < 2:1044021/150‑1 (MQ=32) cACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAAcgc < 2:1391447/150‑1 (MQ=32) ccTGGCGAATGTAGCGCGC‑TGGGGGCGGCCAATCGCCGCCGCCCCATGCACCCCCGGGCTCTGGCTAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGATACCTGGTCGGGCGCGAGGTAACATCCCTGTAAAAcgcg < 1:1479110/149‑1 (MQ=11) ggCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGccc < 1:3081482/150‑1 (MQ=32) gcgcAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCt < 1:3456348/150‑1 (MQ=32) gcgcAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCt < 1:3456336/150‑1 (MQ=32) cgcAAGGAGCGCGC‑AGGGGGCGGCCAAAAGCCCCCGCCCCCAGCACCCCCCGGCGCTGGCGGACAAAAACCCCGCGGCGCGGTGCCCACGGCGTATCCCTTAAGGCTACCCGGGCGGGCGCGGGGGAACAAACCAGTAAAAAGCGcccac > 2:267458/1‑148 (MQ=2) gcAAGGAGCGCGC‑AGGGGGCGGCCAAACGCCGCCGCCCCCGGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCGGCGCGGTGCCCGCGGCGTATACCGTAAGGCTACCGGGGCGGGCGCGAGGGAACATCCCAGTAAAACGCGCCCCCa > 2:3100832/1‑150 (MQ=11) aaGGAGCGCGC‑TGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGc < 2:810953/150‑1 (MQ=17) aGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGcc < 1:3969373/150‑1 (MQ=32) aGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGcc < 1:261961/150‑1 (MQ=32) aGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGcc < 1:261833/150‑1 (MQ=32) gAGCGCGC‑AGGGGGCGGCCAAGCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCca < 1:1086373/150‑1 (MQ=17) cgcgc‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACAt < 1:1918210/150‑1 (MQ=32) c‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCAt < 2:2536364/150‑1 (MQ=32) c‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCAt < 1:1472613/150‑1 (MQ=32) aGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACCTCCAtg > 2:3570428/1‑150 (MQ=17) | TGGTGGTGACTGGCGTATTTAAGATGATATTTTAAAATTAATTAATGTCATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGC‑AGGGGGCGGCCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATG > NC_000913/2229031‑2229326 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |