| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 987,561 | G→C | 6.3% | intergenic (‑579/+24) | ompF ← / ← asnS | outer membrane porin 1a (Ia;b;F)/asparaginyl tRNA synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 987,561 | 0 | G | C | 6.3% | 221.5 / 5.3 | 76 | intergenic (‑579/+24) | ompF/asnS | outer membrane porin 1a (Ia;b;F)/asparaginyl tRNA synthetase |
| Reads supporting (aligned to +/- strand): ref base G (35/36); new base C (2/3); total (37/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.30e-01 | |||||||||||
CCGCAATAAGAATGCGGATTAGTTTTTGCGCGTAAATGTTGCAATGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGTTACGTAAGCAATCAGACGTTCAAAACCAAGACCGAAACCTGAATGCGGAACAGTACCGTA > NC_000913/987413‑987710 | ccGCAATAAGAATGCGGATTAGTTTTTGCGCGTAAATGTTGCAATGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGATAAAAAAAAGAGCCAGCggg > 2:799861/1‑150 (MQ=255)ccGCAATAAGAATGCGGATTAGTTTTTGCGCGTAAATGTTGCAATGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGgc > 1:878359/1‑150 (MQ=255) aTAAGAATGCGGATTAGTTTTTGCGCGTAAATGTTGCAATGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTgg > 1:1124859/1‑150 (MQ=255) aTAAGAATGCGGATTAGTTTTTGCGCGTAAATGTTGCAATGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTgg > 1:740862/1‑150 (MQ=255) aaTGCGGATTAGTTTTTGCGCGTAAATGTTGCAATGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGCCCGCTGGCTCtt < 2:849378/150‑1 (MQ=255) aTGCGGATTAGTTTTTGCGCGTAAATGTTGCAATGTAATATTCCTTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCttc > 2:583014/1‑149 (MQ=255) tGCTGATTAGTTTTTGCGCGTAAATGTTGCAATGTAATATTCCGTAACACGATGATCGTTATGGCGGGGGTGCAAATAGATTGCGTGACTTAACAAACAGATAACATGACAGAAAAGAT‑AAAAAAACAGCCAGCGGGCGCTGGCTCTTGa < 1:175323/150‑1 (MQ=255) tGCGGATTAGTTTTTGCGCGTAAATGTTGCAATGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGa < 2:639093/150‑1 (MQ=255) tGCGGATTAGTTTTTGCGCGTAAATGTTGCAATGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGa < 2:164735/150‑1 (MQ=255) tGCGGATTAGTTTTTGCGCGTAAATGTTGCAATGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGCCCGCTGGCTCtttt < 1:587659/150‑3 (MQ=255) tGCGGATTAGTTTTTGCGCGTAAATGTCGCAATGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTgc > 2:796587/1‑149 (MQ=255) gCGGATTAGTTTTTGCGCGTAAATGTTGCAATGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGaa < 1:555983/150‑1 (MQ=255) gCGGATTAGTTTTTGCGCGTAAATGTGTCAATGTAATATGCCGTAACAGGATGATCGTTATGGCGGGGTTGCAACTAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑TAAAAAAGAGCCAGCGCCCGCGGGCTCttttt < 2:87844/150‑4 (MQ=255) tttttGCGCGTAAATGTTGCAATGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTaaa > 1:238313/1‑150 (MQ=255) tttGCGCGTAAATGTTGCAATGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAAtt < 1:824074/150‑1 (MQ=255) ttGCGCGTAAATGTTGCAATGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGATGCAAATAGATTGCTTTACTTAACAAACAGATAACTTGACATAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTa < 1:811465/150‑1 (MQ=255) tGCGCGTAAATGTTGCAATGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTat > 1:1251183/1‑149 (MQ=255) gcgcGTAAATGTTGCAATGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGa > 2:1107667/1‑150 (MQ=255) cgcgTAAATGTTGCAATGTAATATTCCGAAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGaa < 1:536130/150‑1 (MQ=255) cgTAAATTTTGCAATGTAATATTCCGTAACACCAAGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAACAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGc < 1:633259/150‑1 (MQ=255) tAAATGTTGCAATGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTg < 1:313980/150‑1 (MQ=255) aTGTTGCAATGTAATATTCCGTAACATGATGATCGTTATGGCGGGGTTTCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCg < 1:941724/150‑1 (MQ=255) aTGTTGCAATGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCg < 2:1045631/150‑1 (MQ=255) gTTGCAATGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGAAAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGtt < 1:536799/150‑1 (MQ=255) ttGCAATGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAATTAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGATGCTGGCGTTa > 2:643694/1‑150 (MQ=255) ttGCAATGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTa > 1:571111/1‑150 (MQ=255) gCAATGTAATAATCCGTAACAGGATGATCGTTATGGCGGTGTTGAAAATAGATAGCTAGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTAcc > 2:897955/1‑149 (MQ=255) aTGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCgg < 1:1297968/150‑1 (MQ=255) aTGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCgg > 2:276773/1‑150 (MQ=255) ttAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAg < 1:564143/149‑1 (MQ=255) ttCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTg < 1:860270/150‑1 (MQ=255) ccGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTAGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTggg > 2:243229/1‑150 (MQ=255) gTAACAGGAGGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCACTTGAAGACTCTAAATTACAAGCTGGCGATACGCGGAGTACGAGGGac > 1:869462/1‑149 (MQ=255) tAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAACCAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAAc < 1:173442/150‑1 (MQ=255) ggATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAat > 2:313049/1‑150 (MQ=255) ggATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAat > 1:118658/1‑150 (MQ=255) gatgatCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAatc < 1:1100886/150‑1 (MQ=255) atgatCGTTATGGCGGGGGTGAAAATAGATTGCTTGACTTAACAAACACATAACTTGACAGAAAAGAT‑AAAAAATGAGCCAGCGGGCGCTTGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAatca < 2:470423/150‑1 (MQ=255) cGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATCAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAatcacatca < 1:236893/150‑1 (MQ=255) gTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAatcacatcac > 2:643410/1‑150 (MQ=255) aTGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCacgta < 2:878359/150‑1 (MQ=255) cGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGtt < 1:183071/150‑1 (MQ=255) ggTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTg > 2:1136693/1‑150 (MQ=255) gTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGc > 1:310441/1‑150 (MQ=255) gTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGc < 1:539118/150‑1 (MQ=255) tGCAAATAGATTGCTTGACTTAACACACAGATAACTTGACAGAAAAGAT‑AAAAAAACAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCAc < 1:168227/150‑1 (MQ=255) tGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGACCGGAATCACATCACGTACGTTTTGCAc > 2:1230204/1‑150 (MQ=255) tGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCAc < 1:847066/150‑1 (MQ=255) tGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCAc < 1:491026/150‑1 (MQ=255) tGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGCCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCAc > 2:1235109/1‑150 (MQ=255) gCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACg > 1:450432/1‑150 (MQ=255) gCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAAATAGAAGCTGGCGATACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACg > 1:7277/1‑150 (MQ=255) cAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGc > 2:290836/1‑150 (MQ=255) cAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGc < 1:485119/150‑1 (MQ=255) tAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGAGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTATGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGt > 1:802071/1‑150 (MQ=255) aCTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGTTACGTAAGCaa < 1:948949/150‑1 (MQ=255) aCTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGACAGTTACGTAAGCaa > 1:1220168/1‑150 (MQ=255) cTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGTTACGTAAGCAAt > 1:740680/1‑150 (MQ=255) aacaGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGTTACGTAAGCAATCAGACGt > 2:1270166/1‑150 (MQ=255) aacaGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGTTACGTAAGCAATCAGACGt > 2:1306274/1‑150 (MQ=255) acaGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCATAGGGCGCTGGCTCTTGAAGACGCAAAAATAGAAGCTGGCGTTACTCGGAGTACGAGGGAACGGAATCACAACACGTACGATTTGCACGCCAGTTACGAAAGCAATCAGACttt > 1:529784/1‑150 (MQ=255) aaCTTGACAGAAAAGAT‑ATAAAAATAGCCAGCGGGCGCTGGCTCTTTAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGTTACGTAAGCAATCAGACGTTCAAAAc < 2:122124/150‑1 (MQ=255) aaCTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGTTACGTAAGCAATCAGACGTTCAAAAc < 1:610752/150‑1 (MQ=255) aCTTGACAGAAAAGATAAAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGTTACGTAAGCAATCAGACGTTCAAAAc < 1:799861/150‑1 (MQ=255) tgccAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGTTACGTAAGCAATCAGACGTTCAAACCCatg > 2:894621/4‑148 (MQ=255) cAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTTCACGCCAGTTACGTAAGCAATCAGAAGTTCAAAACCAAGAcc > 2:908252/1‑150 (MQ=255) cAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGTTACGTAAGCAATCAGACGTTCAAAACCAAGAcc > 1:134075/1‑150 (MQ=255) aGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGTTACGTAAGCAATCAGACGTTCAAAACCAAGACCg < 2:238313/150‑1 (MQ=255) t‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGTTACGTAAGCAATCAGACGTTCAAAACCAAGACCGAAACCTGa < 1:290836/150‑1 (MQ=255) t‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGTTACGTAAGCAATCAGACGTTAAAAACCAAGACCGAAACCTGa > 2:123134/1‑150 (MQ=255) tcttcaaGAGCCAGCGCCCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGTTACGTAAGCAATCAGACGTTCAAAACCCAGACCGAAACCTGaa > 2:1031687/6‑150 (MQ=255) aaaaaaaGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTGTTGCACGCCAGTTACGTAAGCAATCAGAAGTGCAAAACCAAGACCGAAAccgtaa > 1:727820/1‑146 (MQ=255) aaaacaGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTTAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGTTACGTAAGCAATCAGACGTTCAAAACCAAGACCGAAACCTGAAt < 1:1143474/150‑1 (MQ=255) ttcaaGAGCCAGCGCCCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTAACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGTTACGTAAGCAAGCAGACGTTCAAAACCACGAACGAAACCTGAATg > 1:337436/4‑150 (MQ=255) aaaaaGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGTTACGTAAGCAATCAGACGTTCAAAACCAAGACCGAAACCTGAATg < 2:191445/150‑1 (MQ=255) aaGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGTTACGTAAGCAATCAGACGTTCAAAACCAAGACCGAAACCTGAATGCgg < 2:1121923/150‑1 (MQ=255) ccAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGTTACGTAAGCAATCAGACGTTCAAAACCAAGACCGAAACCTGAATGCGGAACAg < 1:888188/150‑1 (MQ=255) cGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGTTACGTAAGCAATCAGCCGTTCAAAACCAAGACCGAAACCGGAATGCGGAACAGTAcc > 2:329008/1‑150 (MQ=255) gcgcTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGTTACGTAAGCAATCAGACGTTCAAAACCAAGACCGAAACCTGAATGCGGAACAGTACCGTa < 1:706839/150‑1 (MQ=255) | CCGCAATAAGAATGCGGATTAGTTTTTGCGCGTAAATGTTGCAATGTAATATTCCGTAACAGGATGATCGTTATGGCGGGGTTGCAAATAGATTGCTTGACTTAACAAACAGATAACTTGACAGAAAAGAT‑AAAAAAAGAGCCAGCGGGCGCTGGCTCTTGAAGACGCTAAATTAGAAGCTGGCGTTACGCGGAGTACGTGGGAACGGAATCACATCACGTACGTTTTGCACGCCAGTTACGTAAGCAATCAGACGTTCAAAACCAAGACCGAAACCTGAATGCGGAACAGTACCGTA > NC_000913/987413‑987710 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |