| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,045,731 | G→T | 5.4% | P25T (CCT→ACT) | gfcE ← | putative O‑antigen capsule outer membrane auxillary protein export channel |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,045,731 | 0 | G | T | 5.4% | 224.6 / 2.5 | 83 | P25T (CCT→ACT) | gfcE | putative O‑antigen capsule outer membrane auxillary protein export channel |
| Reads supporting (aligned to +/- strand): ref base G (40/38); new base T (2/3); total (42/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.89e-01 | |||||||||||
GTTAGCCTGCGACATAATCGGTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTATTGTCCAACCGGTACTTCTCGCTCTGCC > NC_000913/1045585‑1045879 | gTTAGCCTGCGACATAATCGGTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAAc < 1:503911/150‑1 (MQ=255)gTTAGCCTGCGACATAATCGGTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGATCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGaaa > 2:577596/1‑149 (MQ=255) gCCTGCGACATAATCGGTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACGATTTTGTCCATGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTCCTGGTC‑AGAATTTATCGACCAGTAACAAgg < 2:305309/150‑1 (MQ=38) ccTGCGACATAATCGGTTTGGCGCGCTACTGATCAATCAATACTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCTATGACATCCTTGTTCCTGGTC‑AGAATTTATCGACCAGTAACAAgga < 2:373322/150‑2 (MQ=37) ccTGCGACATAATCGGTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAggg < 1:773235/150‑1 (MQ=255) ccTGCGACATAATCGGTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGGCAGGTAGTTCAATGCCCTCCTTGTTACTGGTCGATAAATTCT‑GCACAGGAACAAgtg > 2:649545/1‑148 (MQ=255) cTGCGACATAATCGGTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGt > 2:580738/1‑150 (MQ=255) cTGCGACATAATCGGTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGt < 2:1271950/150‑1 (MQ=255) cGACATAATCGGTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACa < 2:415000/150‑1 (MQ=255) cGACATAATCGGTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACa < 2:1067216/150‑1 (MQ=255) aaaaaaTCTGTTTGGCGCGCAAAGGATCAAACCTTCCTGTCGTGACCGGATAGATATTGACCATTTTGTCCAGGTCATACTTATTGTCAGGTAGATCAATGACATCCTTTTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATg < 1:463710/146‑1 (MQ=255) cATAATCGGTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGc < 1:1314890/150‑1 (MQ=255) tAATCGGTTTGGCGCGCAACTGATTAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGAAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTg > 2:835974/1‑150 (MQ=255) tAATCGGTTTGGCGCGCAACTGATTAATCAATCCTGGCGTGAAGGGATAGATATTGACCAGTTTGTCCAGGTCATACTGATTGTCAGGGAGTTCAATGCCATCCTTGTTACTGGTCGATAAATTCT‑GCCCAGGAACAAGGGTACATgagg > 2:831805/1‑147 (MQ=255) tAATCGGTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTg > 1:298321/1‑150 (MQ=255) tAATCGGTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTg < 1:533142/150‑1 (MQ=255) tCGCTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCa < 1:714358/150‑1 (MQ=255) ggTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCaaa < 2:470509/150‑1 (MQ=255) gcgcAAGTGATCAATCTATGCTGGCGGGACGGGATAGTAAGTGACCATTTTGTCAAGGTCATAGTGATTGTCAGGTAGTGGAATCACATCCATGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAACCACAGAAc < 2:1173647/150‑1 (MQ=255) cgcAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGAACATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACa > 2:165247/1‑150 (MQ=255) gcAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAg > 2:749055/1‑150 (MQ=255) cAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGc < 1:412028/150‑1 (MQ=255) aCTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAATGGTACATGCTGTCAAAGACAGAACAGCCa > 2:830558/1‑150 (MQ=255) cTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGTGTACATGCTGTCAAAGACAGAACAGCCaa > 1:6821/1‑150 (MQ=255) tGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAAt < 1:215121/150‑1 (MQ=255) tGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAAt > 2:586983/1‑150 (MQ=255) gATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTAAGGTAGTTCAATGACATCCTTGATAATGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAAtt > 1:972026/1‑149 (MQ=255) caatcCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTAc < 2:777724/150‑1 (MQ=255) caatcCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTAc < 2:639568/150‑1 (MQ=255) aatcCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTAcc < 1:1282399/150‑1 (MQ=255) gACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTaaa > 1:391900/1‑150 (MQ=255) aCGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTaaaa > 2:371666/1‑150 (MQ=255) aCGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTaaaa < 1:758678/150‑1 (MQ=255) ggATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATg < 1:377291/150‑1 (MQ=255) ggATAGATATTGACCATTTTGTCCAGGTCATAATGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATg < 2:84845/150‑1 (MQ=255) tatagataTTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTaaaatgtt < 2:250918/149‑5 (MQ=255) tagataTTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTc > 2:189253/1‑150 (MQ=255) tatTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGGCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGGCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCtttt < 1:649545/150‑1 (MQ=255) atTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCttttt < 1:453935/150‑1 (MQ=255) gACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCATTGTCAGTACCGAACACATAAAATTGTTCTTTTTCAt > 2:104636/1‑150 (MQ=255) ccATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTg > 2:1081403/1‑150 (MQ=255) ttGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTta < 1:310904/150‑1 (MQ=255) tCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATGGGTTTatat > 2:661012/1‑150 (MQ=255) ccAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGCACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTAtttt > 2:622094/1‑150 (MQ=255) cAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATAttt > 2:1267240/1‑150 (MQ=255) gTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATc < 2:26961/150‑1 (MQ=255) cATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAg < 1:606578/150‑1 (MQ=255) aTACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGt > 2:46802/1‑150 (MQ=255) cTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCaa > 2:227855/1‑150 (MQ=255) tGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCaat < 1:189253/150‑1 (MQ=255) gATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATTCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCaatg < 1:369799/150‑1 (MQ=255) gATTGTCAGGTAGTTCAATGAAATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCaatg < 1:979838/150‑1 (MQ=255) gTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTAt > 2:1205895/1‑150 (MQ=255) tCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAAtt > 1:1017907/1‑150 (MQ=255) tCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAAtt > 1:1220384/1‑150 (MQ=255) cAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTa > 2:981885/1‑150 (MQ=255) aTCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAgg > 1:350601/1‑150 (MQ=255) tacTTGTTAATGGTCGATAAATTCT‑GACCAGGAACAAGGTTACATGCTGTCAAAGACAGAACAGACAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGt < 1:69832/148‑1 (MQ=255) tCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGt < 1:605903/150‑1 (MQ=255) cccTTGTTCCTGGTC‑AGAATTTATCGACCAGTAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGt > 2:1199721/2‑150 (MQ=38) ccTTGTTCCTGGTC‑AGAATTTATCGACAAGTAACTAGGGTACATGCTGACAAAGCAAGATCAGCCAATGTCAGTACCGAAAACTT‑‑‑AATGTTCTTATACAATCGTAAATATGTATCAGTCAATCTAATGTTATGAAATACGTAAGGTAAtt > 2:564184/1‑150 (MQ=255) ccTTGTTACTGGTCGATAAATTCT‑GACCAGGAACTAGGGTACATGCTGTCAAAGACAGAACAGCCAAAGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGtt < 2:549432/150‑1 (MQ=255) tGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTAtt > 2:2528/1‑150 (MQ=255) gTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTACATAGGTTTATATTTATCAGTCAATGTAATTTAATGAAATACTTCAGGTTAttt > 2:477216/1‑149 (MQ=255) gTTACTGGTCGATAAATTCT‑GAACAGGAACAAGTGTACATTCTGTCAAAGACAGAAAAGACAATTTCAGTACCTAAAACTTAAAAATGTTCTTTTTCATTGTTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTATTg < 1:24648/150‑1 (MQ=255) gTTACTGGGCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATATATCAGTCAATGTAATGTTATGTATTACGTCAGGTTATTg < 2:870338/150‑1 (MQ=255) tACTTGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACATAACATCAAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTATTGTc < 1:320746/150‑1 (MQ=255) cTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTATTGTCCa > 1:1270539/1‑150 (MQ=255) cTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTATTGTCCa > 2:1001006/1‑150 (MQ=255) ggTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTATTGTCCAAc > 2:367834/1‑150 (MQ=255) ggTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTATATATTTATCACTCAATGTAATGTTATGAATTACGTCAGGTTATTGTCCTAc > 2:222548/1‑150 (MQ=255) gTCTATAAATTCT‑GACCATGAACAAGGGTACATGCTGTCAAAGAAAGAACAGCCAATGTCAGTACCCGAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTATTGTCCAAcc < 2:112200/150‑1 (MQ=255) gTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTATTGTCCAAcc < 1:371666/150‑1 (MQ=255) cGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTATTGTCAAACCgg > 1:98263/1‑150 (MQ=255) aTAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATA‑TTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTATTGTCCAACCGGTAc < 2:965098/150‑1 (MQ=255) tAAATTCT‑GACCAGTTTCAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGACAGGTTATTGTCCAACCGGTAc < 1:475900/150‑1 (MQ=255) tAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTATTGTCCAACCGGTAc < 2:742004/150‑1 (MQ=255) aaTTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTATTGTCCAACCGGTACtt > 1:538387/1‑150 (MQ=255) aaTTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTATTGTCCAACAGGTACtt > 1:1097818/1‑150 (MQ=255) aTTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTATTGTCCAACCGGTACTtc > 2:132118/1‑150 (MQ=255) aTTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTATTGTCCAACCGGTACTtc > 2:132115/1‑150 (MQ=255) gACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTATTGTCCAACCGGTACTTCTCGct > 1:868727/1‑150 (MQ=255) ccAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTATTGTCCAACCGGTACTTCTCGctct > 1:884414/1‑150 (MQ=255) ggAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTATTGTCCAACCGGTACTTCTCGCTCTGcc > 1:309437/1‑150 (MQ=255) ggAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTATTGTCCAACCGGTACTTCTCGCTCTGcc > 1:1254682/1‑150 (MQ=255) ggAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTATTGTCCAACCGGTACTTCTCGCTCTGcc > 2:951683/1‑150 (MQ=255) ggAACAAGGGAACATGCTCTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTATTGTCCAACCGGTACTTCTCGCTCTGcc < 2:472170/150‑1 (MQ=255) | GTTAGCCTGCGACATAATCGGTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCT‑GACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTTCATTGGTTTATATTTATCAGTCAATGTAATGTTATGAATTACGTCAGGTTATTGTCCAACCGGTACTTCTCGCTCTGCC > NC_000913/1045585‑1045879 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |