| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,177,234 | C→A | 12.7% | intergenic (‑30/+278) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,177,234 | 0 | C | A | 12.7% | 819.7 / 24.4 | 327 | intergenic (‑30/+278) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base C (118/151); new base A (34/20); total (156/171) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.13e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 336 total aligned reads displayed.
GTTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGG > NC_000913/2177085‑2177383 | gTTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTc > 2:4347854/1‑150 (MQ=255) gCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCaaaa < 1:4928324/150‑1 (MQ=255) gCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCaaaa < 1:3573141/150‑1 (MQ=255) gCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCaaaa < 1:3324857/150‑1 (MQ=255) gCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCaaaa < 2:5197014/150‑1 (MQ=255) cAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTTTTTTCGATTTAAAAat > 2:3055321/1‑150 (MQ=255) aGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAata > 2:151903/1‑150 (MQ=255) gcgtgttCTACCACCACTTGCTTCGTTTCGAGATTGTGAATATTGAATGCCGGTACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCCGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAtta‑t < 2:1406636/145‑1 (MQ=255) gCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTAAAAata‑t > 1:5123565/1‑150 (MQ=255) accaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAatt > 1:1489963/1‑150 (MQ=255) accaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTAGATTTCAAAATA‑TAATGaaaat > 1:6545971/1‑148 (MQ=255) caccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTTTTTTAGATTTCAAAATA‑TTATGTAattat > 1:621052/1‑150 (MQ=255) caccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCTATTTCAAAATA‑TAATGAAattat < 1:888990/150‑1 (MQ=255) accacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAattatt < 1:5708944/150‑1 (MQ=255) ttGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGttt < 2:1155081/150‑1 (MQ=255) tGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTAAATTTTCATATACTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGGAATTATTTGtttt < 2:6033597/150‑1 (MQ=255) gCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTTTTTTCGATTTCAAAATA‑TAATTAAAtttttttttttt > 2:5640349/1‑150 (MQ=255) gCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGttttt > 2:5343251/1‑150 (MQ=255) cATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTTTTTTTa > 2:296893/1‑150 (MQ=255) cATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTa < 2:3033638/150‑1 (MQ=255) aTCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTaa < 1:2967949/150‑1 (MQ=255) aTCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTAGATTTAAAAATA‑AAAATAAAATAATTTTTTTTaa > 1:242373/1‑150 (MQ=255) ttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATc < 1:1641489/150‑1 (MQ=255) cGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCga < 2:6683046/150‑1 (MQ=255) gagaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCgag < 1:4070954/150‑1 (MQ=255) gagaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCgag > 1:4869673/1‑150 (MQ=255) gagaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCgag < 2:5158972/150‑1 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATa < 1:5992363/150‑1 (MQ=255) ttGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCCG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATaa < 2:2139090/150‑1 (MQ=255) tgtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAAc < 1:3468875/150‑1 (MQ=255) tgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTAAAAAAA‑AAAATAAAATAATTTTTTTTAAATATAGCGATAACGa > 2:2932453/1‑150 (MQ=255) gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAAAA‑TAATGAAATTATTTTTTTTTAAATATCGAGATAAAGAt > 2:2547095/1‑150 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATca < 1:6437767/150‑1 (MQ=255) tatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAattatt > 2:4726140/1‑122 (MQ=255) ttGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATTAAATTATTTGTTTTTAAATATAGAGATAACGAtaaaaa > 2:4622075/1‑145 (MQ=255) aaTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACaaaaa < 2:6285559/150‑1 (MQ=255) aaTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACaaaaa < 1:5898178/150‑1 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAAc < 2:6547526/150‑1 (MQ=255) gCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGa < 2:763596/150‑1 (MQ=255) gCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAAATATTTGGTTTAAAATATCGAGATAACGATAACAAAAAAGa > 2:6392405/1‑150 (MQ=255) gCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTACAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGa < 2:794206/150‑1 (MQ=255) ccGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGAc < 2:1330595/150‑1 (MQ=255) cGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTAGATTTCAAAATA‑TAATGAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAAAGACAATATGa > 2:4235513/1‑150 (MQ=255) gCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTAGATTTAAAAATA‑TAATTAAATTATTTTTTTTTATATATAGTGATAAAGATGAAAAAAAAGAAAATATTaa > 2:3534924/1‑150 (MQ=255) aTAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTTTTTTTAAATATAGAGATAACGATCACAAAAACGACAAAATGgaaa > 2:4019842/1‑150 (MQ=255) tAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTGTGTTTTGGATTTAAAAATA‑TAATTAAATTATTTTTTTTTTAAAATATATATAACGATAACAAAAAAGACAaaatttaaaa > 1:6355594/1‑144 (MQ=255) gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTc < 2:3177725/150‑1 (MQ=255) gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAAAGATCACAAAAAAGACAAAATGAAAattatta > 2:5909728/1‑149 (MQ=255) ccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATAAGAAAATTATTCg > 2:4146529/1‑150 (MQ=255) cgcgCTGTGCGTTGTTCAGCATCTGCTTTGTCTATACCACGTAAATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATACCGATCACAAAAACGACAATATGAAAATTATTCga < 2:1289655/150‑1 (MQ=255) cgcTGTGCTTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCgagg < 2:6432323/150‑1 (MQ=255) cTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTAGATTTAAAAAAA‑TAAATAAATTATTTTTTTTTAAATATAGAGATAAAGATAACAAAAAAAAAAAAATTAAAAATATTAgaggag > 1:3456377/1‑150 (MQ=255) tgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTAGATTTAAAAAAA‑AAATTAAAATATTTTTTTTTTAATAAATAGATAAAGAAAAAAAAAAAAACAAAAATAAAAATATTATAGGAGttg > 1:12713/1‑148 (MQ=255) tgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACAGTTTCATATCCTG‑TCGTGTGTTTTAGATTTCAAAATA‑TAATGTAATTTTTTTTTTTTAAATATAGATAAAAAGATCACAAAAAAGAAAATATTTAAAATATTAGAGGGGTGa > 1:2181750/1‑150 (MQ=255) cGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTAGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGaaa > 2:5544127/1‑150 (MQ=255) tgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑Gc < 2:4098937/150‑1 (MQ=255) ttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTAAAAATA‑TAATGAAAATATTTTTTTTTAAATATAGAGATAAACATAACCAAAAACACAAAATGAAAATTATTAGGGGAGTGGAAG‑GCaa > 2:1725011/1‑150 (MQ=255) cAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTAGATTTGAAAAAA‑TAAATTAAAAATTTTTTTTTAAAAAAAGAGATAAAGAAAACAAAAAAGACCAGAAGTAAAATATTAGGGGAGTGAAAG‑GCaaaa > 1:3828920/1‑150 (MQ=255) cAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTAGATTTCAAAATA‑AAATGAAATTATTTGTTTTTAAATATAGAGATAACGATCACAAAAAAGAAAATATTTAAAATATTAGAGGAGTGAAAG‑GCaaaa > 2:2740702/1‑150 (MQ=255) cATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTAAAAATA‑TAATGAAATTATTTGTTTTTAAATATAGAGATAAAGATAACAAAAAAGAAAATATGAAAATTATTCGAGGAGTGAAAG‑GCaaaaaaa > 2:5811431/1‑150 (MQ=255) attttGCTTGTTCTATACCACTTACATTTTCAT‑TGCTGTTCTTTTTTTTTCTATTACAAAATA‑TAATTATATTTTTTTTTTTTAAATATCTATATAACTATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCaaaaaaa < 1:4517127/146‑1 (MQ=255) aTCTGCTTTGTCGGTACCACGTACATTTTCATATCCTG‑TCGTGTGTTTTAGTATTAAAAAAA‑TAATTAAAATATTTTTTTTTAAATAAAGAGATAACGAAAACAAAAAACACAAAAATAAAAATATTAGAGGAGTGTAAGTGCaaaaaaa > 1:1098597/1‑150 (MQ=255) aTCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTGTGTTTTAGATTTAAAAATA‑TAAAGTAATTATTTTTTTTTTAATATAGTGATAACCATAACAAAAAACACAAAATTAAAAATATTAGAGGAGTGTAAT‑GCaaaaaaaa > 2:2322914/1‑149 (MQ=255) aTCTGCTTTGTCGATACAACTTAATTTTTAATATCCTG‑TCGTTTTTTTTATATTTAAAAATA‑TAATGAAATTTTTTTTTTTTAATTATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAAc < 1:426289/150‑1 (MQ=255) tGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTTTTTTTAAATATAGAGATAACGATCACAAAAAAGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAAAGGc > 2:5317902/1‑150 (MQ=255) tCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGa < 2:3881078/150‑1 (MQ=255) tCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTAAAAATA‑TAATGAAATTATTTGTTTTTAAATATGGAGATAACGATCACAAAAACGACAATATGTAAATTATTCGAGGAGTGTAAG‑GCAAAAAAAAGGCCTCCCGa > 2:3224133/1‑150 (MQ=255) gATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAACATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATa > 2:4447568/1‑150 (MQ=255) gATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATa < 2:1966564/150‑1 (MQ=255) cACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGaa < 2:1561964/150‑1 (MQ=255) tACATTTTAATACCCTG‑TCGTTTGTTTTCTTTTACAAAATA‑TAATTAATTTATTTGTTTTTAATTTTCGTTTTAACGAACCAAAAAACGACAATATGAAAATTATTCGAGTAGTGAAAG‑GCAAAAAAACGGCTTCCCTATCGGGAGGCCg < 1:2244287/150‑1 (MQ=255) aCATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCTTCCCTATCGGGAGGCCGt < 2:3449251/150‑1 (MQ=255) aCATTTACATATCCTG‑TGGTTTTTTTTC‑TTTTCAAAAAATTAATCAAATTATTTTTTTTTAATTATCTTTATAACTATCAAAAAAACGAAAATATGAAAATTATTCGAGGTGTTAAAG‑GCAAAAAAACGGCTTCCCTATCGGGAGGCCGt < 1:2746963/150‑1 (MQ=255) cATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTa < 2:184230/150‑1 (MQ=255) cATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTa < 2:5454445/150‑1 (MQ=255) cATTTACCTATCCTG‑GGGTTTGTTTTCGTTTTCAACTTA‑TACTGAATTTATTTGTTTTTAAATATCGCGATAAGGATCACAAAACCGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTa < 1:5617448/150‑1 (MQ=255) aaTTTTAATATCCTG‑TCGTTTGTTTTCTATTTAAAAATA‑TAATTAAATTTTTTTTTTTTAAATATCGTGATAACTAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTa < 1:3131376/149‑1 (MQ=255) ttttCATATCCTG‑TCGTGTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGc > 2:6617247/1‑150 (MQ=255) tttCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGCTAGGGAAGCCGTAGCa > 2:2263378/1‑150 (MQ=255) tCATATCCTG‑TCGTTTGTTTTCTATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaaa < 2:2875813/150‑1 (MQ=255) tatCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATAGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTg > 2:3792861/1‑150 (MQ=255) tG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgt < 2:3325276/150‑1 (MQ=255) gtttgtttTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt < 1:2067079/150‑1 (MQ=255) gtttgtttTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 2:5070417/1‑150 (MQ=255) gtttgtttTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGACTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 1:2643806/1‑150 (MQ=255) ttttttttCTATTTCAAAATA‑TAATTAATTTTTTTTTTTTTAAATATCTATATAACTATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt < 1:3224133/150‑1 (MQ=255) tttgtttTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt > 1:5866766/1‑150 (MQ=255) tttgtttTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt > 1:1922113/1‑150 (MQ=255) tgtttTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAATCGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa > 2:5229350/1‑150 (MQ=255) gtttTCTATTTCAAAATA‑TAATTAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTAt < 1:184471/150‑1 (MQ=255) cGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 2:539041/1‑150 (MQ=255) cGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTAGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 1:104930/1‑150 (MQ=255) tttCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATg > 2:2209430/1‑150 (MQ=255) ttCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGc > 2:5695893/1‑150 (MQ=255) ttCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGc > 1:675613/1‑150 (MQ=255) ttCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTGTTATGCCGGATGc > 2:4098895/1‑150 (MQ=255) ttCAAAATA‑TAAAGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGc > 2:2364121/1‑150 (MQ=255) tCAAAATA‑TAATTAATTTATTTGTTTTAAAATATCGAGATAACGATCACAACAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg < 1:1707737/150‑1 (MQ=255) gcAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATCTGAAACTTATTCGAGGAGTGAAAG‑GCAAAACAACGGCCTCCCGATAGGGAAGCCGTAGCAAGGTGCGCGGGTGTTTATGCCGGATGCg > 1:4382885/2‑150 (MQ=255) acAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg < 1:5910011/149‑1 (MQ=255) | GTTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTG‑TCGTTTGTTTTCGATTTCAAAATA‑TAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAG‑GCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGG > NC_000913/2177085‑2177383 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |