Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,239,609 T→G 8.4% intergenic (+64/‑335) alx → / → sstT putative membrane‑bound redox modulator/sodium:serine/threonine symporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,239,6090TG 8.4% 691.0 / 23.6 255intergenic (+64/‑335)alx/sstTputative membrane‑bound redox modulator/sodium:serine/threonine symporter
Reads supporting (aligned to +/- strand):  ref base T (138/73);  new base G (6/16);  total (145/110)
Fisher's exact test for biased strand distribution p-value = 8.38e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 263 total aligned reads displayed.

TGGGCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTATT  >  NC_000913/3239460‑3239758
                                                                                                                                                      |                                                                                                                                                     
tGGGCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCtt                                                                                                                                                       >  1:2096068/1‑150 (MQ=255)
  ggCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTcc                                                                                                                                                     <  2:1701308/150‑1 (MQ=255)
   gCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCa                                                                                                                                                    <  1:5862515/150‑1 (MQ=255)
    cGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAg                                                                                                                                                   <  1:1593673/150‑1 (MQ=255)
     gtggtgTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCTTGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAgg                                                                                                                                                  >  2:5096655/1‑150 (MQ=255)
      tggtgTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAggg                                                                                                                                                 >  1:5561558/1‑150 (MQ=255)
       ggtgTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGga                                                                                                                                                <  1:4360939/150‑1 (MQ=255)
        gtgtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGgag                                                                                                                                               <  2:3962435/150‑1 (MQ=255)
           tttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTGGAAGGGAGAgg                                                                                                                                            <  1:4720241/150‑1 (MQ=255)
            ttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAggg                                                                                                                                           <  2:6552004/150‑1 (MQ=255)
            ttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTGGAAGGGAGAggg                                                                                                                                           <  1:2648224/150‑1 (MQ=255)
             tGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGt                                                                                                                                          >  2:2298161/1‑150 (MQ=255)
               gCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCg                                                                                                                                        >  1:6446322/1‑150 (MQ=255)
                 cttCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCggg                                                                                                                                      <  2:4837400/149‑1 (MQ=255)
                 aTTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCggg                                                                                                                                      >  2:3178450/1‑150 (MQ=255)
                 aTTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCggg                                                                                                                                      >  1:2324053/1‑150 (MQ=255)
                    cTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTg                                                                                                                                   <  2:1280220/150‑1 (MQ=255)
                    cTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTg                                                                                                                                   <  2:2382444/150‑1 (MQ=255)
                     tGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGa                                                                                                                                  <  2:6121795/150‑1 (MQ=255)
                     tGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGCGa                                                                                                                                  <  2:3617694/150‑1 (MQ=255)
                       gTGATGACGTTTATTATCACCGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAgg                                                                                                                                <  2:2650717/150‑1 (MQ=255)
                       gTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAgg                                                                                                                                <  2:2073290/150‑1 (MQ=255)
                        tgatgaCGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTACGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAggg                                                                                                                               <  2:4010047/150‑1 (MQ=255)
                           tgaCGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTaa                                                                                                                            >  2:3090475/1‑150 (MQ=255)
                           tgaCGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTaa                                                                                                                            <  2:4144970/150‑1 (MQ=255)
                              cGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAAttt                                                                                                                         <  2:4444064/150‑1 (MQ=255)
                               gTTTTTTATCAACGCGTGGGGGAATTATCGGGTTGATACGCAGGGGGGTGGTTAATTTTTATTCTGCCTAAGCCGTGTACCCTGTCATTAACTTGAGCACGGTTTT‑CTCCCTCTCCCTTCCTGGGAGTGGGTGGGGGTTAGGGTAAtttt                                                                                                                        <  2:5681493/150‑1 (MQ=255)
                               gTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAAtttt                                                                                                                        >  2:1996684/1‑150 (MQ=255)
                               gTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAAtttt                                                                                                                        >  1:1087974/1‑150 (MQ=255)
                                ttttttATCACCGCCTGGGTGAATTATCGCAATCATAAGCCGCGGGGTGTATATTTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACTTTCGCACCTTTTG‑CTCCCCCTCCGTTCCAGGGTGAGGGTGGGGTTGAGGGTAAttttt                                                                                                                       <  2:3694769/150‑1 (MQ=255)
                                      atCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCAcc                                                                                                                 >  1:5512741/1‑150 (MQ=255)
                                      atCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGAGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCAcc                                                                                                                 >  1:6302640/1‑150 (MQ=255)
                                       tCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCg                                                                                                                >  1:2878420/1‑150 (MQ=255)
                                       tCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCg                                                                                                                >  1:5056921/1‑150 (MQ=255)
                                       tCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCg                                                                                                                >  1:6262705/1‑150 (MQ=255)
                                          aCGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATg                                                                                                             >  1:3355608/1‑150 (MQ=255)
                                            gCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCt                                                                                                           >  1:4155700/1‑150 (MQ=255)
                                               tGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGc                                                                                                        >  2:628119/1‑150 (MQ=255)
                                                     aaTTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTACCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTc                                                                                                  >  2:1065891/1‑150 (MQ=255)
                                                       ttATGGGCTTGATACGCAGGGGGGTGTATAATTTTTAATCTGCCTACGCCGTGTACCCTGACATTAACTTGAGCCCCGTGTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTccc                                                                                                <  2:6643595/150‑1 (MQ=255)
                                                       ttATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTccc                                                                                                >  1:6511097/1‑150 (MQ=255)
                                                       ttATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTccc                                                                                                >  2:1628063/1‑150 (MQ=255)
                                                            ggCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGGGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAc                                                                                           >  1:2199960/1‑150 (MQ=255)
                                                             gCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAcc                                                                                          >  1:6079069/1‑150 (MQ=255)
                                                             gCATGATAAGCAGCGGGGTGGATAAATTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAcc                                                                                          >  1:3981399/1‑150 (MQ=255)
                                                                  aTAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAAc                                                                                     >  1:3120423/1‑150 (MQ=255)
                                                                           ggggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTcccc                                                                            >  1:3833145/1‑150 (MQ=255)
                                                                             gttGGATAATTTTTAATCTGCCTAATCCTTGTACCCTTTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCACaa                                                                          >  2:5967901/3‑150 (MQ=37)
                                                                               tGGATAATTTTTAATGTGCCTACGCGGTGTCCCCGGTCATTAACCTGCGCACCTTTTT‑CGCCGGCGCCCTCCGCGGGTGTGGGTGGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAc                                                                        <  2:6428201/150‑1 (MQ=21)
                                                                                  atatTTTTTAATCGGCCTAAGCCTTGTACCCTGTAATTAACATGAGCACCTTTTT‑CGCCCTCTCCCTTCCAGGGTGTGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACggg                                                                     <  2:6079069/150‑1 (MQ=25)
                                                                                  aTAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACggg                                                                     >  2:5193726/1‑150 (MQ=255)
                                                                                    attttttATTCGGCCTACGCGGTGTACCCTTTCTTTAACATGCGCACCGTTTT‑CCCCCACGCCCTCCCCGGGTGTGGGTGGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGc                                                                   <  1:4461191/148‑1 (MQ=21)
                                                                                    attttttACTCTGCCAACGCCGTGTACCCTGTCATTAACTTGAGCACGTTTTA‑CTCCCTCCCCGTCCCGGGGTGTGGGTGGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGc                                                                   <  2:4675412/148‑1 (MQ=25)
                                                                                      tttttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCACACGGGGCGa                                                                 >  1:1938625/1‑150 (MQ=255)
                                                                                       ttttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAg                                                                >  1:3276679/1‑150 (MQ=255)
                                                                                           attCTGCCTACGCCGTGTACCGTGTATTTAACTTGCGCCCCGTTTT‑CGCCCCCTCCCTGCCGGGGTGGGGGTGGGGGTGCGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGa                                                            <  2:449506/148‑1 (MQ=21)
                                                                                            aTCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTAACCTCACCCTAACCCTCTACCCAAAAGGGGAGAgggtag                                                           >  2:2283771/1‑147 (MQ=255)
                                                                                             tCTGCCTACGCGGTTTACCCTGTCATTAACATGAGCACCTTTTT‑CTCCCTCTCCCTTCCCGGGTGTGGGTCGGGGTGTGGTTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACt                                                          <  1:6472596/150‑1 (MQ=25)
                                                                                             tCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCTCCCTAACCCTCTCCCCACACGGGGCGAGGGGAcg                                                          >  2:6511065/1‑149 (MQ=255)
                                                                                             tCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACt                                                          >  1:5248522/1‑150 (MQ=255)
                                                                                             tCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACt                                                          >  1:2552263/1‑150 (MQ=255)
                                                                                               tGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGa                                                        >  2:3581113/1‑150 (MQ=255)
                                                                                               tGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGa                                                        >  2:804862/1‑150 (MQ=255)
                                                                                               tGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGa                                                        >  2:2546421/1‑150 (MQ=255)
                                                                                                cccTACGCGGTGT‑CCCTTTTATTAACATTTCCACCTTTTTCCCCCCACCCCCTGCCTGGTTGTGGGGGGGGTTGTGGGAAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGAc                                                       <  1:2412009/149‑1 (MQ=12)
                                                                                                  cTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGAGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCg                                                     >  1:4876431/1‑150 (MQ=255)
                                                                                                   tAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGCGGGGACTGACCGa                                                    >  2:6309300/1‑150 (MQ=255)
                                                                                                   tAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGa                                                    >  1:4247928/1‑150 (MQ=255)
                                                                                                       ccGTGTCCCCTGTCTTTAACATGCGCACCGTTTT‑CGCCCTCGCCCTTCCCGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTcc                                                <  2:5512716/150‑1 (MQ=25)
                                                                                                         gtgtACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCtt                                              >  2:4403849/1‑150 (MQ=255)
                                                                                                             ccccttccATTAACAAGCCCACCTTTCC‑CGCCCCCACCCCACCTGGGTGTGGGTGGGGGTGTGGGTCATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAACCGGGGCGAGGGGACTGACCGAGTCCtttttt                                          <  1:2082177/143‑1 (MQ=16)
                                                                                                             ccccTGCCATAAACATCCCCACCTTTTC‑CCCCCCCCCCCTCCCTGGGTGTGGGGGGGGGTGCGGGAAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCtttttt                                          <  1:305488/149‑1 (MQ=18)
                                                                                                               ccTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGa                                        >  2:146509/1‑150 (MQ=255)
                                                                                                                cTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCCGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAt                                       >  1:6619014/1‑150 (MQ=255)
                                                                                                                 tGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAtg                                      >  2:4762978/1‑150 (MQ=255)
                                                                                                                   tCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCACTCCCCAAAAGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAtgtt                                    >  1:3645678/1‑150 (MQ=255)
                                                                                                                   tCATTAACATGAGCACCGTTTT‑CGCCCTCTCCCTTCCCGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAtgtt                                    <  2:4357848/150‑1 (MQ=255)
                                                                                                                      ttAACTTGAGCACCGTTTT‑CTCCCTCGCCCTTCCCGGGAGTGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGtc                                 <  1:6134340/150‑1 (MQ=255)
                                                                                                                         aCATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGtcatc                              >  2:3811505/1‑150 (MQ=255)
                                                                                                                         aCATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGtcatc                              >  2:1890719/1‑150 (MQ=255)
                                                                                                                         aCATGAGCACCGTTTT‑ATCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACAGATGCTGGCCTGTTCCCCACACCCTAACCCTATCCCCAAACGCGGCGAGCGGACTGACCGAGTCC‑ATTTTGATGTTGtcatca                             >  2:3409486/1‑150 (MQ=255)
                                                                                                                           aTGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAg                            >  2:5259722/1‑150 (MQ=255)
                                                                                                                              cgCACCTTTTT‑CCCCCTCCCCCTCCCCGGGTGTGGGTGGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCt                         <  2:2765702/149‑1 (MQ=25)
                                                                                                                              aGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCt                         >  2:4082844/1‑150 (MQ=255)
                                                                                                                               ccACCGTTTT‑CGCCCCCCCCCTCCCTGGGTGTGGGGGGGGGTGGGGGCAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTg                        <  1:857286/149‑1 (MQ=25)
                                                                                                                                cACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTgg                       >  2:1538144/1‑150 (MQ=255)
                                                                                                                                 aCCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTTTCATCAGTCTGGa                      >  1:137390/1‑150 (MQ=255)
                                                                                                                                     tttt‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAACCGGGGCGAGGGGACTGACCGAGTGCTTTTTTGATGTTGTCATCAGTCTGGACGcc                  >  2:1871636/1‑150 (MQ=255)
                                                                                                                                        t‑ctccctctcccTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCACCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGcc               >  1:706960/1‑149 (MQ=255)
                                                                                                                                        ccgaccctctccctGGAAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTGGTTTGATGTTGTCATCCGTCTGGAAGCCGc                >  2:1005465/5‑150 (MQ=25)
                                                                                                                                          ctccctctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTACCCTCACCCTAACCCACTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCAc              >  1:1988554/1‑150 (MQ=255)
                                                                                                                                             cctctcccgGCCGGGGTGAGGGTGGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGtt           <  1:153491/150‑1 (MQ=37)
                                                                                                                                              ctctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCGAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTGTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTg          >  2:5726905/1‑150 (MQ=255)
                                                                                                                                               tctccctTCCGGGGAGTGGGTGGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTgg         <  2:6490824/150‑1 (MQ=255)
                                                                                                                                                ctccctTCCCGGGTGTGGGTGGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGc        <  2:2815617/150‑1 (MQ=255)
                                                                                                                                                ctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCAAACCCACTCCCCAAACGGGGCGAGGGGTCTGACCGAGTCCTTTTTTGATGTTGTCATCAGTATGGAAGCCGCACGTTGGc        >  1:2995536/1‑150 (MQ=255)
                                                                                                                                                    ctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCAAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTa    >  1:500250/1‑150 (MQ=255)
                                                                                                                                                     ttCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTAt   >  1:1192545/1‑150 (MQ=255)
                                                                                                                                                      tCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTAtt  >  2:6664492/1‑150 (MQ=255)
                                                                                                                                                      tCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTAtt  >  2:4737926/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
TGGGCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTATT  >  NC_000913/3239460‑3239758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑