| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,051,259 | G→T | 5.8% | noncoding (224/245 nt) | csrC → | CsrC sRNA sequesters CsrA, a carbon flux regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,051,259 | 0 | G | T | 5.8% | 1280.4 / 43.6 | 360 | noncoding (224/245 nt) | csrC | CsrC sRNA sequesters CsrA, a carbon flux regulator |
| Reads supporting (aligned to +/- strand): ref base G (200/139); new base T (9/12); total (209/151) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.06e-01 | |||||||||||
Only 100 of 368 total aligned reads displayed.
TGTCAGGAAGACAAACGTCCGGAGACGTAATTAAACGGAAATGGAATCAACACGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCACGCAGCAAAGGTCATGCAAAAGCGCGTCGAAAAACACG > NC_000913/4051110‑4051408 | gAAGACAAACGTCCGGAGACGTAATTAAACGGAAATGGAATCAACACGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCt < 1:712351/150‑1 (MQ=255) gACAAACGTCCGGAGACGTAATTAAACGGAACTGGAATCAACACGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTc < 2:1803899/150‑1 (MQ=255) aaaCGTCCGGAGACGTAATTAAACGGAAATGGAATCAACACGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGATTACTCTGTCGcc < 1:407922/150‑1 (MQ=255) aaaCGTCCGGAGACGTAATTAAACGGAAATGGAATCAACACGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGcc > 2:3161313/1‑150 (MQ=255) aaCGTCCGGAGACGTAATTAAACGGACATGGAATCAACACGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGATTACTCTGTCGCCt < 2:1364090/150‑1 (MQ=255) aaCGTCCGGAGACGTAATTAAACGGAAATGGAATCAACACGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGATTACTCTGTCGCCt < 2:2280169/150‑1 (MQ=255) cGGAGACGTAATTAAACGGAAATGGAATCAACACGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTc > 1:4436077/1‑150 (MQ=255) cGGAGACGTAATTAAACGGAAATGGAATCAACACGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTc < 2:2003284/150‑1 (MQ=255) ggAGACGTAATTAAACGGAAATGGAATCAACACGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCt > 1:2730692/1‑150 (MQ=255) gagaCGTAATTAAACGGAAATGGAATCAACACGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCtt > 2:5775234/1‑150 (MQ=255) cGTAATTAACCGGAAATGGAATCAACACGGTTTGTTCCGGCTAACGTAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCTTTATGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTttgct < 1:1643415/150‑1 (MQ=255) gTAATTAAACGGAAATGGAATCAACACGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTttgctt > 2:3741668/1‑150 (MQ=255) aTTAAACGGAAATGGAATCAACACGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAATAACCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGAGACAGAGTAATCTGTCGCCTTTTTTCATagcttgct > 2:3366049/1‑150 (MQ=255) ttAAACGGAAATGGAATCAACACGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTgcttgctt < 2:2147873/150‑1 (MQ=255) aCGGAAATGGAATCAACACGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTg < 1:2893444/150‑1 (MQ=255) ggAAATGGAATCAACACGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCt < 2:6463349/147‑1 (MQ=255) gAAATGGAATCAACACGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTa < 1:721815/150‑1 (MQ=255) gAATCAACACGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGAGTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTcc > 2:5383750/1‑150 (MQ=255) aaCACGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCcgccgc > 2:1339471/1‑150 (MQ=255) acacGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCa > 1:6663257/1‑150 (MQ=255) acacGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCa > 1:3861344/1‑150 (MQ=255) acGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCaaa > 2:5969476/1‑150 (MQ=255) cGGATTGTTCCGGCTACAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAAt < 1:5807794/150‑1 (MQ=255) cGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAAt > 2:3498232/1‑150 (MQ=255) cGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAAt > 2:5142501/1‑150 (MQ=255) ggATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCATTGCTTGCTTTCTGTTAGATTCCGCCGCAAATc > 1:1239253/1‑150 (MQ=255) gATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCt > 2:2844980/1‑150 (MQ=255) gTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATAc < 1:1899574/150‑1 (MQ=255) ttCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACt > 1:5629220/1‑150 (MQ=255) ttCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACt > 1:3061981/1‑150 (MQ=255) ccGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGGAAAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTg > 2:2457543/1‑150 (MQ=255) cGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGaa > 2:2404945/1‑150 (MQ=255) tAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATaaa > 2:6775028/1‑150 (MQ=255) aaaGGACTAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAGGGGTTATGAGTCAGG‑TAAAAAGGCGACAGAGTATTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATaaaa < 2:2536192/150‑1 (MQ=255) ggAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACgg > 1:2778259/1‑150 (MQ=255) ggAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGATTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTTAATAAAACgg > 1:3584988/1‑150 (MQ=255) gAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGc > 2:4979380/1‑150 (MQ=255) gAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTATGTTAGATTCCTCCGCAAATATATACTGAATAAAACGGc > 2:4667045/1‑150 (MQ=255) aaaaaCTGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATATATACTGAATAAAACGGCt < 1:2436822/150‑1 (MQ=255) aCAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTaaaa < 1:5979172/150‑1 (MQ=255) aCAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTaaaa < 1:853358/150‑1 (MQ=255) aCAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTaaaa > 2:6200608/1‑150 (MQ=255) aCAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTaaaa < 1:3133109/150‑1 (MQ=255) aGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGATTACTCTGTCGc > 2:4863441/1‑83 (MQ=255) aGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGATTACTCTGTCGc < 1:4863441/83‑1 (MQ=255) gtgtgtTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGa > 1:2677808/1‑150 (MQ=255) gtgtTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAAc > 1:4192805/1‑150 (MQ=255) tgtTGGCGTCCTGCTATTATTGTAAGACCCTTTAATGTTTATGAGTATGG‑AAAAAAGGCGACATATTAATCTTTCGCGTTTTTTCTTTGCTTGCTTTCTGTTATATTCCGCCGAAAATATATACTTAATAAAACGGATAAAAGACGAAcc < 1:3021204/150‑1 (MQ=255) ttGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCAt > 1:1424187/1‑150 (MQ=255) gcggcCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTAt < 1:5142501/150‑1 (MQ=255) ggcCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGa > 2:4525123/1‑150 (MQ=255) gcCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGaa < 2:3435559/150‑1 (MQ=255) ccTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGATCCATTATGaaa < 1:3967476/150‑1 (MQ=255) tGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAAcc > 2:71722/1‑150 (MQ=255) tGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAAcc > 2:3033541/1‑150 (MQ=255) tGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAAcc > 2:3088589/1‑150 (MQ=255) tGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCGATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAAcc > 2:1755396/1‑150 (MQ=255) tcAAGGATTGTAAGACCCGTTATGGGTTATGATTCAGG‑AATAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGGTTGCTTTCTGTTAGATTCCGCCTCAAATCTATACTGTATAAAAAGTCTAATTGACGAACCATTATGAAACca < 2:4077953/149‑1 (MQ=255) gCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACca < 2:359493/150‑1 (MQ=255) cAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCt < 1:5392221/107‑1 (MQ=255) ggATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTCTACTGAATAAAACGGCTAAAAGACGAACCAGTATGAACCcatcat > 2:6699849/1‑150 (MQ=255) gATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCatcatc < 1:5067790/150‑1 (MQ=255) aaGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCaaa < 1:2145869/150‑1 (MQ=255) aGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAAc < 1:6396304/150‑1 (MQ=255) aGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAAc > 2:4470218/1‑150 (MQ=255) aGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAAc > 2:384646/1‑150 (MQ=255) aGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTAGCCATTTTTATTTGCTTGCTTTCTGTTAGATTACGCCGCAAAACTATACTGAAAAAAAAGGCTAAAAGACGAAACAATATGAAAACCTCAACTTAAAAc > 1:1074663/1‑150 (MQ=255) ccGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTCTACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCAc > 2:4449252/1‑150 (MQ=255) ggTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCACGCAGCaaa < 1:4459856/150‑1 (MQ=255) ggTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCACGCAGCaaa < 2:1112239/150‑1 (MQ=255) ggTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCAGTATGAAACCATCATCTTCAAACTCACGCAGCaaa < 2:1814126/150‑1 (MQ=255) gTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCAc > 2:2683282/1‑141 (MQ=255) gTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCATTTTTATTTGCTTGCTTTCTGTTAGATTACGCCGCAAATCAATACTGTATAAAACGGCTAAAAGAAGAACCATTATTAAACCAACATCATCAAAAACACGCAGCAAAg > 1:6144331/1‑150 (MQ=255) ttATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTGTTTGCTTGCTTTCTGTTGGTTTCCGCCGCAAATGTATACGGAATAAAACGGCTAAAAGACGAACCCTTCTGAAACCATCATCTTCAAACTCACGCAGCCAAgg > 1:4745296/1‑150 (MQ=255) tATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCACGCAGCAAAGGt < 1:547692/150‑1 (MQ=255) tGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCACGCAGCAAAGGTCa < 1:2482320/150‑1 (MQ=255) tGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCACGCAGCAAAGGTCa < 2:631277/150‑1 (MQ=255) gAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGTCGAACCATTATGTTACGATCATCTTCAAACTCACGCAGCAAGGGTctt > 2:2753946/1‑148 (MQ=255) aGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCACGCAGCAAAGGTCATg < 1:6177831/150‑1 (MQ=255) gTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAATACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCACGCAGCAAAGGTCATGc < 2:4007816/150‑1 (MQ=255) gTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCACGCAGCAAAGGTCATGc > 2:4220468/1‑150 (MQ=255) tCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCACGCAGCAAAGGTCATg > 2:3332526/1‑148 (MQ=255) gg‑AAAAAAGGCGACAGAGTAATCTGTCGCCATTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCAACATCATCAAACTCACGCAGCAAAGGTCATGCaaaa > 1:3308235/1‑150 (MQ=255) aaaaaGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGaa > 1:4155612/1‑107 (MQ=255) aaaaaGGCGACAGAGAAATCTGACGCCTTTTATATTTGATAGCATTCTGATAGAAACCGCCGCAAATCTAAACTGAATAAAACGGCTAAAAGACGAACAAATAAGAAACCATCATCTTCAAACGCACGCAGAAAAGGTCATGCAAAAtcg > 1:6570375/1‑150 (MQ=255) aaaaGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGCAACCATCCTCTTCAAACGCACGCCGCAGAGGTCATGCAAAAgcgc > 1:6490135/1‑150 (MQ=255) aaGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCACGCAGCAAAGGTCATGCAAAAGCGCGt > 2:527157/1‑150 (MQ=255) aaGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCACGCAGCAAAGGTCATGCAAAAGCGCGt < 1:349086/150‑1 (MQ=255) aGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCACGCAGCAAAg < 1:2371923/132‑1 (MQ=255) aGGCGACAGAGTAATCTGTCGCCTTTTTACTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCACGCAGCAAAGGTCATGCAAAAGCGCGTc < 1:3413881/150‑1 (MQ=255) ggCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCACGCAGCAAAGGTCATGCAAAAGCGCGTCg < 2:1531308/150‑1 (MQ=255) ggCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCACGCAGCAAAGGTCATGCAAAAGCGCGTCg > 2:6014005/1‑150 (MQ=255) ggCGACAGAGTAATCTGTCGCCTTTTTTCGTTGCTTGCTTTCTGTTAGATTACGCCGCAAATCTAAACTGAATAAAACGGCTAAAAGGCGAACCATTATGAAACCCACCTCATCAAACACACGCAGCAAAGGTCATGCAAAAgcgccgcg > 2:4132601/1‑146 (MQ=255) cGACAGAGTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATTAAACCATCATCTTCAAACTCACGCAGCAAAGGTCATGCAAAAGCGCGTCGaa > 2:4323284/1‑150 (MQ=255) gACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCACGCAGCAAAGGTCATGCAAAAGCGCGTCGaaa > 2:6269465/1‑150 (MQ=255) gACAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCACGCAGCAAAGGTCATGCAAAAGCGCGTCGaaa > 1:5869645/1‑150 (MQ=255) cAGAGTAATCTGTCGCCTTTTTTATTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAAAGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCACGCAGCAAAGGTCATGCAAAAGCGCGTCGaaaaa > 1:1750660/1‑150 (MQ=255) agagTAATCTGTCGCCTTTTTTCTTTGCTTTCTTTCTGTTAGATTACGCCGCAAATCTATACTGAATAAAAAGGCTAAAATACGAACCATTATTAAAACATCATATTAAAACTAACGCAGCAAAGGTCATGCAAAAGCGCGTCGAAAAac > 1:4582817/1‑150 (MQ=255) agTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCACGCAGCAAAGGTCATGCAAAAGCGCGTCGAAAAacac > 2:5573747/1‑150 (MQ=255) agTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCAGTATGTAACCATAATCTTCAAACTCACGCAGCAAAGGTCATGCAAAAGCGCGTCGGAAAacac > 1:3177314/1‑150 (MQ=255) | TGTCAGGAAGACAAACGTCCGGAGACGTAATTAAACGGAAATGGAATCAACACGGATTGTTCCGGCTAAAGGAAAAACAGGGTGTGTTGGCGGCCTGCAAGGATTGTAAGACCCGTTAAGGGTTATGAGTCAGG‑AAAAAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAACGGCTAAAAGACGAACCATTATGAAACCATCATCTTCAAACTCACGCAGCAAAGGTCATGCAAAAGCGCGTCGAAAAACACG > NC_000913/4051110‑4051408 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |