| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,726,046 | A→C | 5.7% | intergenic (‑300/+23) | kgtP ← / ← rrfG | alpha‑ketoglutarate transporter/5S ribosomal RNA of rrnG operon |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,726,046 | 0 | A | C | 5.7% | 592.3 / 22.6 | 177 | intergenic (‑300/+23) | kgtP/rrfG | alpha‑ketoglutarate transporter/5S ribosomal RNA of rrnG operon |
| Reads supporting (aligned to +/- strand): ref base A (102/64); new base C (6/4); total (109/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.40e-01 | |||||||||||
Only 100 of 188 total aligned reads displayed.
GGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTG > NC_000913/2725897‑2726195 | ggATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCa < 2:831943/150‑1 (MQ=255) tCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGACGGATGGCC‑t < 1:1038473/150‑1 (MQ=255) tCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGACGGATGGCC‑t < 1:894343/150‑1 (MQ=255) ggTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTc > 1:2012685/1‑150 (MQ=255) gTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGCATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCg < 2:549704/150‑1 (MQ=255) gTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCg > 2:84292/1‑150 (MQ=255) gTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCg < 2:2034210/150‑1 (MQ=255) gTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCg > 1:1706128/1‑150 (MQ=255) gTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCg > 1:1661215/1‑150 (MQ=255) gTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCg > 1:1482630/1‑150 (MQ=255) gTAAGGAGGACACGTATGGAAGTGGGCAAGTAGGGGAAGCCGTATCCGTAGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGACAGGATGGCC‑TTTCg > 1:963054/1‑150 (MQ=255) gaaGGCGGACACGTATGGCAGAGGGCAAGGTGGGGCAGCCGGATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCCGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGc < 2:1906093/149‑1 (MQ=25) gaCACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAAttt > 2:1074345/1‑150 (MQ=255) gaCACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAAttt > 1:1074825/1‑150 (MQ=255) acacGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTg > 2:2277364/1‑150 (MQ=255) acacGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTg > 2:1196480/1‑150 (MQ=255) cccGTTTGTAATTGGGCATGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCTTTTGTGGTAGTTTACGACGCGCAGCGTCGCATCTGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGa < 2:290019/148‑1 (MQ=21) cccGTATGGACGGGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGACTCTGGCATTTGTGGGTGTATAAGACGCGCAGCGTCGCTTCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGTTGGCC‑TTTCGCATAATTTGa < 1:1427794/148‑1 (MQ=25) cacGTCTGGAAGGGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGTGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGa < 2:1339935/150‑1 (MQ=255) cacGTATGGAAGTGGGCATGTTGGGGACGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGTTGGCC‑TTTCGCATAATTTGa < 1:567202/150‑1 (MQ=255) cacGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCCGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGa < 1:1903010/150‑1 (MQ=255) cacGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGa < 2:153823/150‑1 (MQ=255) cacGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGa < 2:2413734/150‑1 (MQ=255) cacGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGa < 2:1753011/150‑1 (MQ=255) cacGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCGGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGa < 1:1845828/150‑1 (MQ=255) cGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATg > 1:661760/1‑150 (MQ=255) cGTATGGAAGTGGGAAAGTTGGGGAAGCCGTATCAGTTGCTCAATCTGGCATATGTGGGAGTATAAGACGCGCAGAGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTAGATg > 1:2038894/1‑150 (MQ=37) tATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGcc > 1:591195/1‑150 (MQ=255) tATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGcc > 1:131627/1‑150 (MQ=255) tATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGcc > 1:1171645/1‑150 (MQ=255) ggATGTGGGCTAGTTGGGTAAGCCGTATCCGTTGCTTAATCTGTCATTTGTGGGATTATACGACGCGCAGCGTCGCTTCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCTTCCGTCAGTATGGCC‑TTTCGCATAATTTGATGCCTgg < 1:750328/150‑1 (MQ=21) ggAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTgg < 2:800315/150‑1 (MQ=255) ggAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTgg < 2:1961373/150‑1 (MQ=255) aGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAATGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAg > 1:1488473/1‑150 (MQ=255) aGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAg > 1:634261/1‑150 (MQ=255) aGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAg > 2:1880679/1‑150 (MQ=255) aGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAg > 1:2116992/1‑150 (MQ=255) aGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAg > 1:2308832/1‑150 (MQ=255) aGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAg > 2:259790/1‑150 (MQ=255) tGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGtt < 1:1874474/150‑1 (MQ=255) tGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGtt < 1:1751454/150‑1 (MQ=255) gCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGACGGATGGCC‑ttttt > 2:1675562/1‑123 (MQ=37) gCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGACGGATGGCC‑ttttt < 1:1675550/125‑3 (MQ=37) aaGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTa < 1:1566423/150‑1 (MQ=255) ggggAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACtctc > 2:665708/1‑150 (MQ=255) gggAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCg < 2:2012685/150‑1 (MQ=255) gggAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCg < 2:833665/150‑1 (MQ=255) ggAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGc > 2:148232/1‑150 (MQ=255) gAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAATAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCa > 2:153339/1‑150 (MQ=255) aGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATg < 1:1969265/150‑1 (MQ=255) ccGTATCCGTTGCTGACTCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATggg < 1:1345967/150‑1 (MQ=255) cGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATgggg < 1:1797520/150‑1 (MQ=255) cGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATgggg > 2:118214/1‑150 (MQ=255) gTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAAGTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGga > 2:769510/1‑150 (MQ=255) cGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGAccc > 2:972814/1‑150 (MQ=255) cTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCacac > 1:281682/1‑150 (MQ=255) cTGAATCCGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCacac > 2:378241/1‑150 (MQ=255) gCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCgg > 2:1260804/1‑150 (MQ=255) gCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCgg > 2:931335/1‑150 (MQ=255) gCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCgg > 2:1626809/1‑150 (MQ=255) atatGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGgcg < 1:1804483/150‑1 (MQ=255) atatGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGgcg < 1:490480/150‑1 (MQ=255) tgtgGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTa > 1:1161475/1‑150 (MQ=255) tgtgGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTa > 1:208001/1‑150 (MQ=255) tgtgGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTa > 1:2338918/1‑150 (MQ=255) gggAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAATAGGCCATCCGTCAGGATGGGC‑TTTCGCATAATTTGATGCCTGGCTGTTCCCTAGTCTCGCATGGGGAGACCCCACACTACCCACGGCGCTACgg > 2:2371783/1‑150 (MQ=25) gggAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACgg > 2:1365974/1‑150 (MQ=255) ggAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAATAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGc < 1:1846763/150‑1 (MQ=255) gTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGtt < 2:634261/150‑1 (MQ=255) gACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACtt > 1:2157597/1‑150 (MQ=255) aCGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTc > 2:249253/1‑150 (MQ=255) aCGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTc > 2:1085859/1‑150 (MQ=255) cgcgCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCt < 1:1279756/150‑1 (MQ=255) cgcgCAGCGTCGCATCAGGCATTTTTTTCTGCGCAAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCt < 1:1093772/150‑1 (MQ=255) cgcgCAGCGTCGCATCAGGCATTATTTTCTGCGCCTATGCAAAAAGGCCATCCGTCATTATGGCC‑TTTCGCATATTTTGATGCCTGGCAGTTCCCTACTCTCTCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCt < 1:1444539/150‑1 (MQ=25) cGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCg < 1:378241/150‑1 (MQ=255) aGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGt > 2:1943567/1‑150 (MQ=255) aGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTACCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGt > 2:131061/1‑150 (MQ=255) gCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCa < 1:299206/150‑1 (MQ=255) gCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑GTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCa > 2:442429/1‑150 (MQ=255) tttttttCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGt > 2:1422814/1‑150 (MQ=255) tttttttCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGt < 2:1597985/150‑1 (MQ=255) ttttttCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTg > 1:232409/1‑150 (MQ=255) tttttCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTgg < 2:1476173/150‑1 (MQ=255) gcCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACcgc > 2:2155701/1‑150 (MQ=255) gcCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACcgc > 2:1098086/1‑150 (MQ=255) gCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACg > 2:1501235/1‑150 (MQ=255) cgaaaGGCCATCCTGACGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGgc > 2:604992/3‑150 (MQ=255) aaaGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGgccg < 1:148232/150‑1 (MQ=255) aaGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGgccgc < 2:426326/150‑1 (MQ=255) aGGCCATCCTGACGGATGGCCTTTTTGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGgccgc > 2:223755/1‑150 (MQ=11) ggCCATCCTTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCa < 1:1074345/150‑1 (MQ=255) ggCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCa < 2:1074825/150‑1 (MQ=255) gCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAg > 2:1312034/1‑150 (MQ=255) gTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAAtt > 2:1074744/1‑150 (MQ=255) cAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCt < 1:1011973/150‑1 (MQ=255) aGGATGGCC‑TTTCGCATAATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTg > 1:2238438/1‑150 (MQ=255) aGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTg < 1:1880679/150‑1 (MQ=255) aGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTg < 1:259790/150‑1 (MQ=255) aGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTg < 2:1297140/150‑1 (MQ=255) | GGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCC‑TTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTG > NC_000913/2725897‑2726195 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |