| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,799,374:1 | +T | 5.6% | intergenic (‑104/+19) | pheM ← / ← rplT | phenylalanyl‑tRNA synthetase operon leader peptide/50S ribosomal subunit protein L20 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,799,374 | 1 | . | T | 5.6% | 498.2 / 22.1 | 126 | intergenic (‑104/+19) | pheM/rplT | phenylalanyl‑tRNA synthetase operon leader peptide/50S ribosomal subunit protein L20 |
| Reads supporting (aligned to +/- strand): ref base . (63/56); new base T (4/3); total (67/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.54e-01 | |||||||||||
Only 100 of 129 total aligned reads displayed.
GTGCTAAAGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCTGT > NC_000913/1799230‑1799523 | gTGCTAAAGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTccc < 2:491268/150‑1 (MQ=255) tGCTAAAGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCct > 2:571593/1‑150 (MQ=255) gtAAAGTAAAAAAAGAAGCGGAAATTAGCAGCATTAATTGCTTGAGTTACCTTTTGGTACTCTTCAAAATACCTTTTTTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCctct < 2:1398310/149‑1 (MQ=255) tAATGTATAAAAAGTATCGTAAAATAGGAGCATTCATTGCTTGCGTTATCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCtt < 1:248763/150‑1 (MQ=255) tAAAGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCtt < 1:604024/150‑1 (MQ=255) aaaGTAAAAATTGAAGCGGAAAATAGCAGCATTCATAGCTTTCGTTACCTTTTGCTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAACAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAG‑CTAGTCTCCCTCttt < 1:76807/150‑1 (MQ=255) aaaGTAAAAAAAGAAGCTGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCttt < 2:1160236/150‑1 (MQ=255) aaaGTAAAAAAAGAAGCGGAAAATAGCAGCATTCTTTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAG‑CTAGTCTCCCTCttt < 1:1576858/150‑1 (MQ=255) aaGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTc < 1:1360221/150‑1 (MQ=255) gTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAG‑CTAGTCTCCCTCttttcg < 1:788471/150‑4 (MQ=255) aaaaaaGAAGCGGAAAATAGCAGAATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAACGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTg < 2:47652/150‑1 (MQ=255) aaaGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCt < 1:1331939/150‑1 (MQ=255) aaaGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCt < 2:461260/150‑1 (MQ=255) aagaagAGTAAAATAGCAGCATTCATTGCATGCGTTACCTATTGGTTCTCTTCAAAATACCTTTATTGAAATGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGATGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCtt < 2:258385/150‑1 (MQ=255) aagCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATg < 1:10550/150‑1 (MQ=255) gCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGcc > 1:115144/1‑150 (MQ=255) cGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCa > 1:330283/1‑150 (MQ=255) ggAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTATTTCAACTGGCTTATGCCag > 1:929976/1‑150 (MQ=255) aaaTAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAgc > 1:679864/1‑150 (MQ=255) tAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAgctgc < 1:1590821/150‑1 (MQ=255) gcaTTCATTTCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCg < 1:554767/150‑1 (MQ=255) attcattGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCt < 1:1252714/150‑1 (MQ=255) attcattGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCt < 2:892542/150‑1 (MQ=255) ttcattGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCAATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCtt < 2:491382/150‑1 (MQ=255) cattGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCtttt < 1:1304440/150‑1 (MQ=255) gcttgcGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCaa > 2:646483/1‑150 (MQ=255) tgcGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCa > 1:1678740/1‑150 (MQ=255) gcGTTACCTTTTGGTACTGTTCAAATGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGATAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCGAGAGCTGCTTTCGCTTTTTCATCCag < 1:955699/150‑1 (MQ=255) gcGTTACCTTATGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATTGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCag < 1:949608/150‑1 (MQ=255) cGTTACCTTTTGGTACTCTTCAAAAGACCATTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGACGGAGACTAG‑CTAACTCTATCAACTGGCTTATGCCAGAGCTCCTTTCGCTTTTTCAACCaga > 1:777837/1‑150 (MQ=255) tACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑ATCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCg > 1:1701934/1‑150 (MQ=255) tACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTAAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCg > 1:829307/1‑150 (MQ=255) aCCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCgg > 2:1666228/1‑150 (MQ=255) tttGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGaa < 1:1380891/150‑1 (MQ=255) ttGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATTCCAGAGCTGATTTCGCTTTTTCAACCAGAGCGGTGAAc > 1:1058614/1‑150 (MQ=255) gTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCt < 1:271448/150‑1 (MQ=255) gTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAACTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCt < 1:144186/150‑1 (MQ=255) tACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTAGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGAGGTGAACGCTa > 1:1637766/1‑150 (MQ=255) tctTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACtt > 2:414564/1‑150 (MQ=255) ctTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACttt > 1:1635564/1‑150 (MQ=255) ctTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAACAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACttt > 2:22363/1‑150 (MQ=255) cAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTc < 1:1691695/150‑1 (MQ=255) aaaaGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCg < 1:18848/150‑1 (MQ=255) aaaGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGa > 1:1432870/1‑150 (MQ=255) cTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCATAGCGGTGAACGCTACTTTGTCGAATACTg > 2:357117/1‑150 (MQ=255) ttATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCCGAGCGGTGAACGCTACTTTGTCGAATACTGCg < 2:271851/150‑1 (MQ=255) tGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGatat > 2:556276/1‑150 (MQ=255) tGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGatat > 2:1464752/1‑150 (MQ=255) tGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCATCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGatat > 2:30805/1‑150 (MQ=255) aaaaGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCa > 2:590991/1‑150 (MQ=255) aaaGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAg > 1:1478890/1‑150 (MQ=255) aaaGGCGACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAAGAGTGCGATATCAg > 1:1472142/1‑150 (MQ=255) ggCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCa > 2:1277451/1‑150 (MQ=255) gCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAg > 1:602995/1‑150 (MQ=255) cGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATc > 2:873221/1‑150 (MQ=255) cGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGACAGAGCTGCTTTCGCTTTTTCAACCATAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATc > 2:1039175/1‑150 (MQ=255) gCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCtt > 1:176498/1‑150 (MQ=255) gCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCtt > 2:420534/1‑150 (MQ=255) cGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCATCCAGGATCTTa > 1:339642/1‑150 (MQ=255) cGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTa > 2:513996/1‑150 (MQ=255) cGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGATTTCGCTTTTACAACCATAGCGGTGAACGCTACTTTGTCGAATACTGCGATAGCAGCCAGGATATTa > 1:1065385/1‑150 (MQ=255) aTAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACg < 2:1442476/150‑1 (MQ=255) tAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGTAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACgg > 2:1105809/1‑150 (MQ=255) aaaaGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGt < 1:982913/150‑1 (MQ=255) aaaGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTc < 1:1504864/150‑1 (MQ=255) aaaGTCAATGTTTTGAGGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTc < 1:1353461/150‑1 (MQ=255) aaGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCg > 1:1284208/1‑150 (MQ=255) aGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAT‑CTCCATCTTTCAACTGGCTAATGCCAGAGCTGCTGTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTGGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGa > 2:1029195/1‑150 (MQ=255) aGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCg < 1:1405508/116‑1 (MQ=255) aGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCg > 2:1405508/1‑116 (MQ=255) aGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGa > 1:825576/1‑150 (MQ=255) cAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGAttt < 2:1464197/150‑1 (MQ=255) gTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAAc > 1:1011284/1‑150 (MQ=255) tttGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACag < 2:679864/150‑1 (MQ=255) tGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACagag < 2:564065/150‑1 (MQ=255) gATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACAGAgg < 2:176498/150‑1 (MQ=255) cGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACAGAGGCtttt < 1:413012/150‑1 (MQ=255) gTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGATTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACAGAGGCttttt < 2:115144/150‑1 (MQ=255) tGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACAGAGGCTTTTTTc > 2:1307539/1‑150 (MQ=255) ccagttgaaaGAGGGAG‑CTAGTCTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCACCAGAGGCTTTTTTCa > 1:335998/8‑150 (MQ=255) aaaCGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACAGAGGCTTTTTTCAg > 2:1679164/1‑150 (MQ=255) aaaCGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCGTTTTCAATCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACAGAGGCTTTTTTCAg < 1:1540576/150‑1 (MQ=255) aaCGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACAGAGGCTTTTTTCAgg > 2:1684230/1‑150 (MQ=255) aaCGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACAGAGGCTTTTTTCAgg > 1:771249/1‑150 (MQ=255) aCGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACAGAGGCTTTTTTCAGGc < 2:1637766/150‑1 (MQ=255) cGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACAGAGGCTTTTTTCAGGcc < 1:858811/150‑1 (MQ=255) gAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACAGAGGCTTTTTTCAGGCCa > 2:1676371/1‑150 (MQ=255) gAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGAGCTTACGGTCGATTTCAACAGAGGCTTTTTTCAGGCCa > 1:469641/1‑150 (MQ=255) gaaaGAGGGAG‑CTAGTCTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACAGAGGCTTTTTTCAGGCCAt > 2:1610724/2‑150 (MQ=255) aaaaGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACAGAGGCTTTTTTCAGGCCAt < 2:330283/150‑1 (MQ=255) aaaGAGGGAGACTAT‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACAGAGGCTTTTTTCAGGCCAtt < 1:968931/150‑1 (MQ=255) aaGAGGGAG‑CTAGTCTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGTCAGGATCTTACGGTCGATTTCAACAGAGGCTTTTTTCAGGCCATtg > 2:1220012/1‑150 (MQ=255) agagGGAG‑CTAGTCTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACAGAGGCTTTTTTCAGGCCATtga > 1:1633048/1‑150 (MQ=255) gagGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCCGCCAGGATCTTACGGTCGATTTCAACAGAGGCTTTTTTCAGGCCATtgat > 2:1220749/1‑150 (MQ=255) gggAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGACGATTAATCGGATAGCAGCAAGGATATTACGGTCGATTTAAACAAAGGATTTTTTCAGGCCTTtaataa > 2:1497860/1‑148 (MQ=255) cTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGc < 1:575218/150‑1 (MQ=255) aG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACAGAGGCTTTATTCAGGCCATTGATGAATTTGCTg < 2:1566804/150‑1 (MQ=255) g‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCTGt < 1:1623120/150‑1 (MQ=255) g‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCTGt < 2:685667/150‑1 (MQ=255) g‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGGGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACCGAGGCTTTTTTCAGGCCCTTGATGAATTTGCTGt < 2:929976/150‑1 (MQ=255) | GTGCTAAAGTAAAAAAAGAAGCGGAAAATAGCAGCATTCATTGCTTGCGTTACCTTTTGGTACTCTTCAAAAGACCTTTATTGAAAAGGCTACGGCGATAAAAGTCAATGTTTTGATGGCGTTGAAACGAAAAGAGGGAGACTAG‑CTCCCTCTTTCAACTGGCTTATGCCAGAGCTGCTTTCGCTTTTTCAACCAGAGCGGTGAACGCTACTTTGTCGAATACTGCGATATCAGCCAGGATCTTACGGTCGATTTCAACAGAGGCTTTTTTCAGGCCATTGATGAATTTGCTGT > NC_000913/1799230‑1799523 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |