| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 292,302 | C→G | 7.0% | intergenic (+71/+20) | yagJ → / ← yagK | CP4‑6 prophage; uncharacterized protein;Phage or Prophage Related/CP4‑6 prophage; conserved protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 292,302 | 0 | C | G | 7.0% | 411.7 / 17.3 | 129 | intergenic (+71/+20) | yagJ/yagK | CP4‑6 prophage; uncharacterized protein;Phage or Prophage Related/CP4‑6 prophage; conserved protein |
| Reads supporting (aligned to +/- strand): ref base C (60/60); new base G (4/5); total (64/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.61e-01 | |||||||||||
Only 100 of 131 total aligned reads displayed.
ATGTGCAGGATGCTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTG > NC_000913/292155‑292451 | ttgtgCAGGATGCTGTTGCTACCGCTGAAAATGCAGAAAAGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATAGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATCAGGCCTTCTCACTg < 1:1042766/149‑1 (MQ=255)aTGTGCAGGATGCTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAATTTTTTTGAAACAATACAAATAAGGCCTTCTCACt < 2:394648/150‑1 (MQ=255)aTGTGCAGGATGCTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTg < 2:1631783/150‑1 (MQ=255)aTGTGCAGGATGCTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTg > 1:680804/1‑150 (MQ=255) gtgCAGGATGCTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATACGGCCTTCGCACTgag > 2:887140/1‑150 (MQ=255) gtgCAGGATGCTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTgag > 1:1073098/1‑150 (MQ=255) gtgCAGGATGCTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTgag < 1:686427/150‑1 (MQ=255) gCAGGATGCTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGaa > 1:622839/1‑150 (MQ=255) gCAGGATGCTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGaa > 1:455466/1‑150 (MQ=255) gCAGGATGCTGTTGCTACCGCTGAAAATGCAGAAAAGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTTCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACATTACAAATAAGGCCTTCTCACTGAGaa < 1:1209575/150‑1 (MQ=255) cAGGATGCTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAg < 1:1683921/150‑1 (MQ=255) cAGGATGCTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGACTTCTCACTGAGAAg > 2:583941/1‑150 (MQ=255) ggATGCTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGc > 2:1329277/1‑150 (MQ=255) gATGCTGTTTCTACCGCTTAAAATGCAGAAACGATATTTAGTAGCGGACATGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCAGTGAGAAGGcc < 2:90376/150‑1 (MQ=255) aTGCTGTTGCTACCGCTGAAAATGCATAAACTTTATTTAGTAGAGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCAGTGAGAAGGcct < 1:926056/150‑2 (MQ=255) aTGCTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCAGTGAGAAGGcct < 1:1326204/150‑2 (MQ=255) aTGCTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCa > 1:653126/1‑150 (MQ=255) tGCTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACTAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCAGTGAGAAGGcctt < 2:941240/150‑3 (MQ=255) gCTGTTGCTACCGCTGAAAATGCAGAAACTTTATTTAGTAGCGTACTTGATGATGAATATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGATACAATACAAATAAGGCCTTCTCACTGAGAAGGCCAtt < 1:254152/150‑1 (MQ=255) gCTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCAtt < 2:847178/150‑1 (MQ=255) tGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTTTCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTAc < 1:555403/150‑1 (MQ=255) tGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGa < 1:171770/150‑1 (MQ=255) gCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGTACTTGCTGATGACTATCAGTAATCAATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGATAAGGCCATTACCGAc < 2:864294/150‑1 (MQ=255) tACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACtt > 2:799403/1‑150 (MQ=255) aaCCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGAAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACtt < 2:846805/149‑1 (MQ=255) ccGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTAc > 2:819212/1‑150 (MQ=255) gCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAg > 2:1541671/1‑150 (MQ=255) gCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCAATTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAg > 1:931699/1‑150 (MQ=255) cTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGt < 1:1642196/150‑1 (MQ=255) tGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGtt < 1:571250/150‑1 (MQ=255) aaaaTGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCg > 2:1621158/1‑150 (MQ=255) aaaaTGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAAAACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGATCg < 2:1067298/150‑1 (MQ=255) cAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTgg > 1:1541843/1‑150 (MQ=255) aaaCGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCAGTg > 2:419740/1‑114 (MQ=255) ttATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTATTAA‑TTTTTTGAAACAATACAAATTATGCCTTCTCACTGAGTAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGcc < 2:1013605/150‑1 (MQ=255) ttAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAg < 2:511450/150‑1 (MQ=255) agCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTAACAGTTCGATTTGGCTACAGCCGAAGTTACg > 1:1047287/1‑150 (MQ=255) gCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACgg < 2:373594/150‑1 (MQ=255) gACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAGACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGtct < 1:1296252/150‑1 (MQ=255) aCTTGCTGCTGACTATCAGTAATCTATAGACAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACACTTCGATTTGGCTACAGACGAAGTTACGGtctc > 1:688905/1‑150 (MQ=255) cTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGTCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTcc > 2:146296/1‑150 (MQ=255) cTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTcc < 1:411645/150‑1 (MQ=255) cTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTAAAGTTCGATTTGGCTACATCCGAAGTTACTGTCTcc > 2:1286722/1‑150 (MQ=255) tGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCtt > 2:883575/1‑150 (MQ=255) gCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTc < 1:750551/150‑1 (MQ=255) cTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCa > 2:1295762/1‑150 (MQ=255) gatgaCTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACTAATAAGTCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCAcc < 2:719294/150‑1 (MQ=255) gatgaCTATAAGTAATCTATAGAAATTTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCAcc < 2:1718436/150‑1 (MQ=255) gaCTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCaaa > 2:146726/1‑150 (MQ=255) aCTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCTAac > 2:750178/1‑150 (MQ=255) tATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAccac > 2:519669/1‑150 (MQ=255) cAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACttt < 2:712587/150‑1 (MQ=255) aGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTg < 2:1433607/150‑1 (MQ=255) gTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGc < 2:1143975/150‑1 (MQ=255) ataGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAAc > 2:338963/1‑150 (MQ=255) taGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACt > 1:36645/1‑150 (MQ=255) taaaaTTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACttt < 1:1252629/149‑1 (MQ=255) gAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACttt > 2:1282167/1‑150 (MQ=255) aaaaTTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTg < 1:12541/150‑1 (MQ=255) aaaaTTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTg < 1:176230/150‑1 (MQ=255) aaaaTTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAAAACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTg < 2:319095/150‑1 (MQ=255) aaaTTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTgg < 1:1486324/150‑1 (MQ=255) aaaTTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTgg < 1:1526582/150‑1 (MQ=255) cGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGt > 1:1370101/1‑150 (MQ=255) cGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTcc < 2:1709704/150‑1 (MQ=255) aaaCTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAg < 1:312071/150‑1 (MQ=255) aCTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTc < 2:1151374/150‑1 (MQ=255) gCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCggg < 2:382514/150‑1 (MQ=255) cATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCTAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGt < 1:750178/150‑1 (MQ=255) cATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGt > 2:1523695/1‑150 (MQ=255) cATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGt < 1:764358/150‑1 (MQ=255) aTTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGtt < 1:1528489/150‑1 (MQ=255) gTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAgc > 2:857155/1‑150 (MQ=255) gTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAgc > 2:376867/1‑150 (MQ=255) gTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAgc > 2:977453/1‑150 (MQ=255) tAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAgcg > 1:1277957/1‑150 (MQ=255) aa‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCTGGTTAACAgcgc > 1:615023/1‑150 (MQ=255) aa‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAgcgc > 1:1098905/1‑150 (MQ=255) tttttGAAACAATACAAATAAGGCATTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGTTCTCATTAACCAAACACTTTGCTTTCCACTTTGGTCAGGTAGTCAAGGCGGGTTAACAGCGCCTg > 2:31864/1‑150 (MQ=255) tGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAg < 1:1300416/150‑1 (MQ=255) tGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAg > 2:1468476/1‑150 (MQ=255) aaTACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTATCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTctgc > 2:1454251/1‑150 (MQ=255) aaTACAAATAAGGCCTTCTCACTGAGAAGGCCATTAAAGACTTACAGTTAGATATCGCAAAATCCGAAAATACTATATACTTCACAAAACACTTTGCTTTCAAATATGGTAAGGAAGTCAAGTCGTGTTAACAGCGCCTGGTAGttatta > 2:330764/1‑146 (MQ=255) aTACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCACACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTctgct > 1:1509152/1‑150 (MQ=255) aTACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTctgct < 2:1025951/150‑1 (MQ=255) cggtAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCGTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGaa > 2:1152749/4‑150 (MQ=255) aaTAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAg > 1:909506/1‑150 (MQ=255) aaTAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAg > 1:445198/1‑150 (MQ=255) tggCCTTCTCAGTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAg > 1:1199030/2‑150 (MQ=255) tggCCTTCTCAGTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAg > 1:1390400/2‑150 (MQ=255) ccTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTAc > 1:1015955/1‑150 (MQ=255) ccTTCTCACTGAGAACGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGAAGTCCAGTCGGGATAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTAc > 1:357864/1‑150 (MQ=255) tctcACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTAt > 1:1681097/1‑150 (MQ=255) cACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTgg > 1:583856/1‑150 (MQ=255) cACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTgg < 2:622839/150‑1 (MQ=255) cACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTgg < 2:421189/150‑1 (MQ=255) aCTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAATCACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTgtt > 1:805768/1‑148 (MQ=255) aCTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGgt > 1:424997/1‑150 (MQ=255) aCTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGgt < 2:1710873/150‑1 (MQ=255) aCTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACATTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGgt > 2:554264/1‑150 (MQ=255) | ATGTGCAGGATGCTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAATCTATAGAAAATTGCGTAACGAAACTGCATTTTAGTAA‑TTTTTTGAAACAATACAAATAAGGCCTTCTCACTGAGAAGGCCATTACCGACTTACAGTTCGATTTGGCTACAGCCGAAGTTACGGTCTCCTTCACCAAACACTTTGCTTTCAACTTTGGTCAGGTAGTCCAGTCGGGTTAACAGCGCCTGGTAGTTCTGCTGGAAGTCAGTACTATTGGTG > NC_000913/292155‑292451 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |