| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,915,514 | C→T | 6.0% | intergenic (‑314/+39) | glmU ← / ← atpC | fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/F1 sector of membrane‑bound ATP synthase, epsilon subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,915,514 | 0 | C | T | 6.0% | 299.0 / 4.8 | 98 | intergenic (‑314/+39) | glmU/atpC | fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/F1 sector of membrane‑bound ATP synthase, epsilon subunit |
| Reads supporting (aligned to +/- strand): ref base C (42/50); new base T (2/4); total (44/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 105 total aligned reads displayed.
ATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAATGTGCTC > NC_000913/3915366‑3915663 | aTTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGTGGGGTTTTATATCAGCAGGATCTATTTGAACTATATTCAGGACGGGTCACAC‑GCTCAAAAAAAagccagcc > 1:277966/1‑150 (MQ=255) aGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGtt > 1:1647488/1‑150 (MQ=255) cAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGTCTggaaac < 2:1477637/150‑6 (MQ=255) ccTTAATTTAAGCGTCAGTTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACt < 1:1484019/150‑1 (MQ=255) cTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTg > 2:1527993/1‑150 (MQ=255) aaTTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCt < 1:996894/150‑1 (MQ=255) tttAAGCGTGAGGGGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAATACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCttt < 1:217789/150‑1 (MQ=255) tttAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGTGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGGCACAC‑GCGCAAAAAAAAGCCAGTCTGGAAACAGGCTGGCttt < 2:1462977/150‑1 (MQ=255) ttAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATTAATAAACAGGAAACCAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGTCTGGAAACAGGCTGGCtttt < 1:1641582/150‑1 (MQ=255) tAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTtg > 2:492194/1‑150 (MQ=255) aGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGTCTGGAAACAGGCTGGCtttttt > 1:263374/1‑147 (MQ=255) aGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGTCTGGAAACAGGCTGGCtttttt < 2:263374/149‑3 (MQ=255) aGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTtgtg < 2:847208/150‑1 (MQ=255) tCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCttt < 2:1393763/150‑1 (MQ=255) aGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTc > 1:642572/1‑150 (MQ=255) aGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTc > 1:1299372/1‑150 (MQ=255) aGGGGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTAAATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTc < 1:1733790/150‑1 (MQ=255) tGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAg > 1:780704/1‑150 (MQ=255) gATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGcc < 2:1689180/150‑1 (MQ=255) tGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCgg > 1:727402/1‑150 (MQ=255) tGTTTTTGCTATTATTTCTATCAATTAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTAAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCgg < 2:297981/150‑1 (MQ=255) tttGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGtt < 1:1527993/150‑1 (MQ=255) gCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACTCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAATCAAGCCTTTATCAAGAATGGCATTTCTGCTTTACAAGCCGGTTTTACa > 1:275038/1‑150 (MQ=255) ctctTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACAt < 1:1305864/150‑1 (MQ=255) tctTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATc < 2:454463/150‑1 (MQ=255) ctTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCg > 2:1409685/1‑150 (MQ=255) tATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCt > 2:629468/1‑150 (MQ=255) tttCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCttt > 2:559034/1‑150 (MQ=255) gATCAATGAATAAACAGGAAAACAGGGTGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACTGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTg < 1:375000/150‑1 (MQ=255) gATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTg > 1:448889/1‑150 (MQ=255) aTCAATGAATAAACAGGAAAACAGGGGTGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTgg < 1:972300/150‑1 (MQ=255) aTCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTgg > 2:1294752/1‑150 (MQ=255) aaTGTATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGCATCTATGTGACCCCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCa < 2:86351/150‑1 (MQ=255) aaTGAATAAACAGGAAAACCGGGGGGTTTTATATCAGGAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCa < 2:721095/150‑1 (MQ=255) aTGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGATTTTCAAGCCGGTGTTACATCGCTTTTTTGGTaaa > 1:524749/1‑150 (MQ=255) tGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACTTCGCTTTTTTGGTCaaa > 2:235351/1‑149 (MQ=255) tGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAAc > 1:173359/1‑150 (MQ=255) tAAGCAGGAAAACAGGGGGGTTTTATATCAGCTGGATCTATGTGAACGCTATTCAGGTCGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGACGGTGTTACATAGCTTTTTTGGGCATCTCGa > 2:227274/1‑150 (MQ=255) aaaCAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGAt < 2:508353/150‑1 (MQ=255) aaaCAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGGTACATCGCTTTTTTGGTCAACTCGAt < 1:101601/150‑1 (MQ=255) aaCAGGAAAACAGGTGGGTTTTATATCAGAAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTACAGCATGGCTTTTGTGCTTTTCAAGACGTTGTTACATCGCTTTTTTGGTCAACTCGATa > 1:368990/1‑150 (MQ=255) cAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTTTTTCCAGACTGGCTTTTTTGCTTTTCAAGCCGGTGTTACATAGCTTTTTTGGTCAACTCGATAAc > 1:340438/1‑150 (MQ=255) ggAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAAcgc < 1:805354/150‑1 (MQ=255) aaaCAGGGGGGTTTTTAATGATCATGTTCTATTGTCACGGTATTTCTGTCGGGGCACACGGCGAAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACgcgc < 1:1411515/150‑1 (MQ=255) ggggTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGCCGGGTCACAC‑GCGCAAAAAACAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGGCAACTCGATAACGCGCAGCTgcgc < 2:196278/150‑1 (MQ=255) ggggTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTgcgc < 2:448889/150‑1 (MQ=255) ggggTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGGCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTgcgc < 1:149631/150‑1 (MQ=255) gTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGAt < 1:1436072/150‑1 (MQ=255) gTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGAGCGAt > 1:1306878/1‑150 (MQ=255) gtgtataTCAGCAGGCTCTATGTGATCGCTATTCAGGACGGGTCACAC‑GCGCAAAAACCAGCCCGCCTCGTTCCAGACTGGCGTTTGTGCTGTTCCAGCCGGTGTTACAGCGCTTTTTTGGTCAACTCGCTCCCGCGCAGCTGCGCGATc < 1:74290/147‑1 (MQ=255) tataTCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATATCGCGCAGCTGcgcgttatcg < 1:460107/150‑7 (MQ=255) tataTCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCt > 1:886363/1‑150 (MQ=255) atatCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCtt < 1:367528/150‑1 (MQ=255) atCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGCTCGCTTTg > 2:1710527/1‑150 (MQ=255) atCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTg < 2:544976/150‑1 (MQ=255) atCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTg < 2:117504/150‑1 (MQ=255) atCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTAGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTg < 1:1317357/150‑1 (MQ=255) atCAGCAGGATCTATGTGAACGCTATTCAGGACGGGGCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTg < 1:961063/150‑1 (MQ=255) cagcagGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGc > 2:383/1‑150 (MQ=255) agcagGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGcc < 2:1707834/150‑1 (MQ=255) agcagGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGcc > 2:877759/1‑150 (MQ=255) agcagGATCTATGTGAACGCTAGTCAGGCCGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTACCAGAATGGCTTATGTGCTTTTAAAGCCGGGGTTCCCTCGCTGATTTGGTCAACTCGATAACGCGCTGCTGAGCCATCGCGTTGGcc > 2:1144680/1‑150 (MQ=255) gcagGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCa > 2:370774/1‑150 (MQ=255) cagGATCTATGTGAACGCTCTTCAGGACGGGTCACAC‑GCTCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAg < 1:1078785/150‑1 (MQ=255) agGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTATGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGt < 1:237209/150‑1 (MQ=255) ggATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGtt > 1:47243/1‑150 (MQ=255) ggATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGtt > 1:246831/1‑150 (MQ=255) gagcaaTGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAATAAAAAGCCAGCCTGTTTCCAGACTGGCTATTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTc < 1:298906/145‑1 (MQ=255) cTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGc < 1:1008852/150‑1 (MQ=255) cTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGc < 2:727402/150‑1 (MQ=255) cTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGc < 1:657272/150‑1 (MQ=255) aTGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAg < 1:1691106/150‑1 (MQ=255) aTGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAg > 2:377518/1‑150 (MQ=255) tgAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGCCTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACg > 1:1013159/1‑150 (MQ=255) gAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGc > 1:1725390/1‑150 (MQ=255) aaCGCTATTCAGGACGGGTCGCAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGcc > 2:189680/1‑150 (MQ=255) aaCGCTATTCAGGACGGGTCGCAC‑GCGCAAAAAAAAGCCAGCCTGTTACCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATAGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGcc > 2:189677/1‑150 (MQ=255) aagCTATTCAGGACGGGTAACAC‑GCTCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCt < 2:1530793/148‑1 (MQ=255) tCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTa > 2:685696/1‑150 (MQ=255) cAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTaa > 2:1321357/1‑150 (MQ=255) cAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTaa > 1:748153/1‑150 (MQ=255) cAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTaa > 2:1123148/1‑150 (MQ=255) aCGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACAGCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTa < 1:1251117/150‑1 (MQ=255) acac‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTAAATCCCATTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGcc > 2:1180782/1‑150 (MQ=255) c‑gcgCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGAAAACGCGCAGCGGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTg < 1:272281/150‑1 (MQ=255) cgcAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTgag < 1:1207268/150‑1 (MQ=255) cAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGagag < 2:1189579/150‑1 (MQ=255) cAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGagag > 2:506730/1‑150 (MQ=255) aaaaaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAgct > 2:453759/1‑150 (MQ=255) aaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAgctgct < 2:1299372/150‑1 (MQ=255) aaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAgctgct < 2:1647488/150‑1 (MQ=255) aaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAgctgct < 1:1409685/150‑1 (MQ=255) aaaGCCAGTCTGGAAACAGGCTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATAGCTTTGGCCAGTTCCGCAGAAGCCTGAGCGTAATCTACGACGCCGTGAGAGCTGCTa > 1:751760/1‑150 (MQ=255) aaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTATCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTaa < 2:106107/150‑1 (MQ=255) agccagccTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAAt > 2:1192980/1‑150 (MQ=255) agccagcaTTTTTCCAGACTGGCTGTTGTGATTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAAAGCGCACCTGCTCGCTCGCTTTGGCCAGTTCAGCAGAAGGCTGAGCGTAATCTACGTCGCAGTGAGAGCTGCTAAt > 1:111673/1‑150 (MQ=255) agccTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAATGTGc < 2:944540/150‑1 (MQ=255) agccTGGTTCGAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAATGTGc < 2:277966/150‑1 (MQ=255) gccTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAATGTGct > 1:898835/1‑150 (MQ=255) ccTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAATGTGctc < 1:370774/150‑1 (MQ=255) | ATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACAC‑GCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAGAGCTGCTAATGTGCTC > NC_000913/3915366‑3915663 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |