| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,189,607 | C→A | 5.3% | intergenic (+34/‑179) | rpoC → / → yjaZ | RNA polymerase, beta prime subunit/stationary phase growth adaptation protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,189,607 | 0 | C | A | 5.3% | 454.7 / 7.4 | 150 | intergenic (+34/‑179) | rpoC/yjaZ | RNA polymerase, beta prime subunit/stationary phase growth adaptation protein |
| Reads supporting (aligned to +/- strand): ref base C (78/63); new base A (4/5); total (82/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01 | |||||||||||
Only 100 of 152 total aligned reads displayed.
TGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCAAACTCGGCAAGGATTCGATACT > NC_000913/4189458‑4189755 | tGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTc > 1:812653/1‑150 (MQ=255) gTCGCCGTGCTGCGGGTGATGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGGCTGGGCGGATCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTcggc < 2:1584680/150‑1 (MQ=255) cGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑tt > 2:1227409/1‑150 (MQ=255) cGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑tt < 1:818334/150‑1 (MQ=255) gctgcGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑ttttt > 1:552095/1‑150 (MQ=255) ctgcGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑tttttt < 1:1391569/150‑1 (MQ=255) gggTGAAGCTCCGGCTGCACCGCAGGTGTCTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATg > 2:1698816/1‑150 (MQ=255) gggTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATg > 2:17686/1‑150 (MQ=255) ggTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATgg < 2:82485/150‑1 (MQ=255) aaGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATgggggg > 1:403526/1‑150 (MQ=255) cgccGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGGTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATTGGGGGAGt < 2:1066164/148‑1 (MQ=255) gCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAgg < 1:228851/150‑1 (MQ=255) gCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCACCCTCGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACTTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAgg < 1:821888/150‑1 (MQ=255) cTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAggg > 2:1720157/1‑150 (MQ=255) cACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGaaa > 2:1283483/1‑150 (MQ=255) ccGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGCACGCACGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCTCTTCGGCGGG‑TTTTTTTATGGGGTGTGTTTAGGGAAagc > 1:81287/1‑149 (MQ=255) ccGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAaga > 1:784950/1‑150 (MQ=255) ccGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAaga > 2:780832/1‑150 (MQ=255) ccGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAaga < 1:1472019/150‑1 (MQ=255) ccGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAaga > 2:774316/1‑150 (MQ=255) cGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAagag < 2:665900/150‑1 (MQ=255) cGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAagag < 2:1026898/150‑1 (MQ=255) aGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCAt < 1:172481/150‑1 (MQ=255) aGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCAt > 1:1447380/1‑150 (MQ=255) ggTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCAtt > 1:1637195/1‑150 (MQ=255) ggTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCAtt < 2:528758/150‑1 (MQ=255) aCTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTc > 1:695939/1‑150 (MQ=255) cTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCa > 2:1178366/1‑150 (MQ=255) tGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAg > 1:1483790/1‑150 (MQ=255) tGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAg < 1:341728/150‑1 (MQ=255) ggCAGACGCCGCATCTGCCAGCCAGGCAGAACTGCTGAACGCAGGGCTGGGCGGTCCTGATAACGCGTAATCGTTAATCCGCAAATAACGTAAAACCCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAg < 2:235319/149‑1 (MQ=255) agcagttCTGCCAGGCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATAttt > 1:1039334/7‑150 (MQ=255) cGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGTGTTTAGGGAAAGGCCATTTGTCAGAATATTTaa > 2:854460/1‑150 (MQ=255) gttCTGCCAGGCTGGCAGAACTGCTGAACGCAGGTCTGGGGGGTTCTGATAACGAGGAATCGTTAATCGGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGATTATTTAAgg > 1:1485983/3‑150 (MQ=255) cATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAgg > 2:670813/1‑150 (MQ=255) cTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAAt > 1:573555/1‑150 (MQ=255) gCCAGCCTGGCAGAACTGCTGAACGCAGGTCTTGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGACAGAGCATTTGTCAGAATATTTAAGGAAttt < 1:688537/150‑1 (MQ=255) cAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTTATCGTTTATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCt < 1:603685/150‑1 (MQ=255) ccTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGaa > 2:402421/1‑150 (MQ=255) tGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATa > 2:1020365/1‑150 (MQ=255) tGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATa > 2:561104/1‑150 (MQ=255) gCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACt > 1:881044/1‑150 (MQ=255) gCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACt < 1:1227409/150‑1 (MQ=255) cAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTc > 2:901441/1‑150 (MQ=255) aGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCa < 2:1447380/150‑1 (MQ=255) gAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCAt > 1:1612714/1‑150 (MQ=255) aaCTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATa < 1:774316/150‑1 (MQ=255) gctgAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGATTTTCTGAATACTCATAATCa > 1:380657/1‑150 (MQ=255) ctgAACGCAGGTCTGGGCGGTTCTGATATCGAGTAATCGTTATTCCGCAAATAAAGTAAAAAACCGCTTAGGCGGG‑TTTTTTTATGTGTGTAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCaa < 1:277239/150‑1 (MQ=255) ctgAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TGTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCaa > 1:307293/1‑150 (MQ=255) gAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATg < 2:1462080/150‑1 (MQ=255) gAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATg < 1:321767/150‑1 (MQ=255) cGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTACGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTag > 2:19932/1‑150 (MQ=255) agCAGGTGTGGGCGGTTCTGATAACGACTTATCGTTAATTCTCAAATAACGTAAAATCCCTGTTCGTCGGT‑TTTTTTTATGTGTGGACTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATTATCAATGTag < 1:893584/149‑1 (MQ=255) gCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTaga < 1:314013/150‑1 (MQ=255) ggTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGAt > 1:1575844/1‑150 (MQ=255) gTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATg < 2:1524418/150‑1 (MQ=255) ggCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTaa > 1:129330/1‑150 (MQ=255) cGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAata < 1:1178366/150‑1 (MQ=255) ggTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAatat > 2:411949/1‑150 (MQ=255) ggTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAatat > 1:115284/1‑150 (MQ=255) gTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATc > 2:309790/1‑150 (MQ=255) tCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCt < 2:80692/150‑1 (MQ=255) cTGATAACGATTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTg < 1:949156/150‑1 (MQ=255) cTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGAAGAGATGACTAATATCATg > 1:1451173/1‑150 (MQ=255) gATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGGCTTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGa > 2:338686/1‑150 (MQ=255) gATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGTGGAGTTTAGGTAAAGAGGATTAGTCAGAATATTTAACGAATTCCTGAATACTCATAATGAATGTAGAGAGGACTAATATCCTGaa > 2:1624146/1‑150 (MQ=255) gATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGaa > 2:1081863/1‑150 (MQ=255) tAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAac > 1:597253/1‑150 (MQ=255) cGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAactga > 2:1635700/1‑150 (MQ=255) aGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAactgact > 2:1484697/1‑150 (MQ=255) aGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAactgact > 2:1679843/1‑150 (MQ=255) gTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAactgactg > 1:1252685/1‑150 (MQ=255) aaTCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATATTCAATGTAGAGATGACTAATATCCTGAAACTGACTGaa > 1:623188/1‑150 (MQ=255) aaTCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGaa > 2:1480366/1‑150 (MQ=255) cGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTa > 1:1342165/1‑150 (MQ=255) cGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTa > 1:748671/1‑150 (MQ=255) cGTTAATCCGCAAATAACGTAAAAACACGCTTCGGAGGG‑TTTTTTTATGGGGGGTGTTTAGGGATAGAGCATTTGTCAGAATATTTAAGGAATTTATGAATAATAATAATAAATTTAGAGATGACTAATATCATGAAACTGACTGAACTa > 2:1056000/1‑150 (MQ=255) tAATCCGCAAATAAAGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAAtt < 1:1401394/150‑1 (MQ=255) ccGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGTGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGt < 1:195228/150‑1 (MQ=255) ccGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGt < 2:253586/150‑1 (MQ=255) ccGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGt < 2:872343/150‑1 (MQ=255) cGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTc < 2:1536595/150‑1 (MQ=255) cAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCaa > 2:1590157/1‑150 (MQ=255) aaTAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCAAAc < 1:901441/150‑1 (MQ=255) ataaaaaaaCCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCAAACTCgg > 1:718411/5‑150 (MQ=255) ataaaaaaaCCCGCCGAAGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCAAACTCgg > 1:1478276/5‑150 (MQ=255) aCGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAAGGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCAAACTCgg > 1:944204/1‑150 (MQ=255) gTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGATCATTTGTCAGAATATTTATGGAATTTCTGAATACTCATAATCATTGTAGAGATGACTAATATACTGAAACTGACTGAACAAATTTAGTCAAACTCGGCa > 1:1583946/1‑150 (MQ=255) aaaaaaaCCCGCCGAAGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCATGAAACTGACTGAACTAATTGAGTCAAACTCGGCa > 2:833604/3‑150 (MQ=255) tAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCAAACTCGGCaa < 1:394270/150‑1 (MQ=255) aaaaCCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCAAACTCGGCAAgg > 2:1357261/1‑150 (MQ=255) aaaCCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCAAACTCGGCAAGGa > 1:173210/1‑150 (MQ=255) aaaCCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCAAACTCGGCAAGGa < 1:783580/150‑1 (MQ=255) aaCCCGCTTCGGCGGG‑GTTTTTTATGGGGGGAGATTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGATTACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTCAACTAATTGAGTCAAACTCGTCAAGTAt > 2:647923/1‑150 (MQ=255) cccGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCAAACTCGGCAAGGATTc < 1:234335/150‑1 (MQ=255) ccGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCAAACTCGGCAAGGATTCg > 2:652784/1‑150 (MQ=255) ccGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCAAACTCGGCAAGGATTCg > 1:1035542/1‑150 (MQ=255) gCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCAAACTCGGCAAGGATTCGAt < 2:812653/150‑1 (MQ=255) tCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCAAACTCGGCAAGGATTCGATACt > 2:1147326/1‑150 (MQ=255) | TGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCAAACTCGGCAAGGATTCGATACT > NC_000913/4189458‑4189755 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |