| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,141,148 | C→T | 6.5% | intergenic (+162/+34) | flgL → / ← rne | flagellar hook‑filament junction protein/endoribonuclease; RNA‑binding protein;RNA degradosome binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,141,148 | 0 | C | T | 6.5% | 435.4 / 12.0 | 138 | intergenic (+162/+34) | flgL/rne | flagellar hook‑filament junction protein/endoribonuclease; RNA‑binding protein;RNA degradosome binding protein |
| Reads supporting (aligned to +/- strand): ref base C (63/65); new base T (3/6); total (67/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.37e-01 | |||||||||||
Only 100 of 141 total aligned reads displayed.
ACATATCATGAAACTGGGTATGTTTTGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCGAAGGCAAAAGTAGGGCGCTGCCAGTCACTGTGAC > NC_000913/1140999‑1141297 | aCATATCATGAAACTGGGTATTTTTTGTCTGCCTGCTCTGTGATCGCTGTGGCGGGCA‑TTTTTTTGACTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGc < 1:229215/150‑1 (MQ=255) cATATCATGAAACTGGGTATGTTTTGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCa < 2:663960/150‑1 (MQ=255) atatCATGAAACTGGGTATTTTTTGTCTGCCTGCTCTGGTATCGCTTGGGCGGGCA‑TTTTTTTTCCTATTTTTCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAg < 1:496069/150‑1 (MQ=255) atatCATGAAACTGGGTATGTTTTGTCTGCCTGCGCTGGGAGCGCTGTGTCGGGCA‑TTATTTTGCCTATTTTGCATTGTTGGTTGGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAg < 2:168610/150‑1 (MQ=255) tatCATGAAACTGGGTATGTTTTGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGt < 2:188453/150‑1 (MQ=255) atCATGAAACTGGGTATGTTTTGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGTATGCCATTCGATGAATTTTAATATGTGGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGtt > 2:72968/1‑150 (MQ=255) cATGAAACTGGGTATGTTTTGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTAc > 2:502048/1‑150 (MQ=255) aaCTGGGTATGTTTTGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑‑AAAAAGCCCTGGCAGTTACCAGGGc < 2:1244811/150‑1 (MQ=255) aCTGGGTATGTTTTGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGc < 1:317416/150‑1 (MQ=255) gggTATGTTTTGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTg < 2:1369287/150‑1 (MQ=255) gggTATGTTTTGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTg < 2:921809/150‑1 (MQ=255) gggTATGTTTTGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTg < 2:366634/150‑1 (MQ=255) gggTATGTTTTGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTg < 2:579369/150‑1 (MQ=255) gggTATGTTTTGTCTGCCTCCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTg < 2:1156930/150‑1 (MQ=255) ggTATGTTTTGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGTAACTGCCAGGGCtttt < 2:360795/150‑3 (MQ=255) tATGTTTTGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGTAACTGCCAGGGCtttttt < 2:161445/150‑5 (MQ=255) tATGTTTTGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGTAACTGCCAGGGCtttttt < 2:610753/150‑5 (MQ=255) tATGTTTTGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGTAACTGCCAGGGCtttttt < 2:1529194/150‑5 (MQ=255) tATGTTTTGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGAtt < 2:1369526/150‑1 (MQ=255) tATGTTTTGTCAGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGATAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAACGCCCTGGTACCTGCCAGGGCtttttt < 1:261386/150‑5 (MQ=255) tGTTTTGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTAc < 2:521079/150‑1 (MQ=255) tGTTTTGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTAc > 1:100789/1‑150 (MQ=255) gTTTTTTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGACAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACt < 1:53443/150‑1 (MQ=255) gTTTTGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGTAACTGCCAGGGCttttttatt < 2:1692636/150‑8 (MQ=255) gTTTTGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACt > 1:1287366/1‑150 (MQ=255) gTTTTGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACt > 2:1358020/1‑150 (MQ=255) tttGTCTGCCTGCTCTGGGATCGCTTGGGCGGTCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACttt < 2:677233/150‑1 (MQ=255) tttGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTATCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACttt < 2:13097/150‑1 (MQ=255) tGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGa > 1:1140266/1‑150 (MQ=255) gTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAg > 2:1452581/1‑150 (MQ=255) gTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAg > 1:400442/1‑150 (MQ=255) gTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAg < 1:165737/150‑1 (MQ=255) tCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATATTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGc < 1:1586511/150‑1 (MQ=255) tccagcTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTaa > 1:27945/5‑150 (MQ=255) gcctgcTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTaa > 1:821504/1‑150 (MQ=255) gcctgcTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGAAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTaa > 2:779853/1‑150 (MQ=255) cctgcTCTGGTTTCGATGGTCCGGGCA‑TTTTTTTGCCTATTTTGCAGTGTTGGCTAGCAAGGATGCCATTCGAGGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAat < 1:1061996/150‑1 (MQ=255) cctgcTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGAAGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAat < 2:220629/150‑1 (MQ=255) tgcTCTGGGATCGCTGGGGCGGGCATTTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAatt < 1:166402/150‑1 (MQ=255) gcTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGTTGAATTTTAATATGTTGATTCATAGATGATAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAattat > 1:95648/1‑150 (MQ=255) tctGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAAttatta > 1:537385/1‑150 (MQ=255) ctGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTAc < 2:377312/150‑1 (MQ=255) ctGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGAAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTAc > 2:288061/1‑150 (MQ=255) ggATCGCTGGGGCTGGCT‑TTTTTTTGCCTATTTTGCTTTGTTGGTTATCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGTAAT‑AAAAATGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCa < 1:441101/150‑1 (MQ=255) ggATCGCTGGGGCGGGCA‑‑TTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAATCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCaa > 1:861764/1‑150 (MQ=255) tGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGtt > 2:1060106/1‑150 (MQ=255) ggcgggcA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCg > 1:1038139/1‑150 (MQ=255) ggcT‑TTTTTATGCCTATTATGCCTTGTTGGTTAGCAAGGCTGGCATTCGATGAATTTTAATATGTTGATTCAAACATGAAAT‑AAAAAACCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGAcg < 2:1193724/150‑1 (MQ=255) gcA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATTAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGAcgc < 1:1369342/150‑1 (MQ=255) gcA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGAcgc > 1:687039/1‑150 (MQ=255) cA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGAcgcg > 1:1123900/1‑150 (MQ=255) cA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGAcgcg > 2:962882/1‑150 (MQ=255) cA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGAcgcg > 2:1631103/1‑150 (MQ=255) ttttGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGa > 2:182823/1‑150 (MQ=255) tGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCg < 1:1592542/150‑1 (MQ=255) cTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCa < 1:1412626/150‑1 (MQ=255) aTTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAATGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTTCGGACGCGCAGGAGCGGCaga > 1:1196159/1‑150 (MQ=255) aTTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCaga > 2:1612792/1‑150 (MQ=255) ttttGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCagag < 1:1207115/150‑1 (MQ=255) tGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCa > 1:221834/1‑150 (MQ=255) cATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCatg > 2:779738/1‑150 (MQ=255) tggtgGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACATGTTGCGGAGGCGCAGGAGCGGCAGAGGCatgatg < 1:37135/147‑1 (MQ=255) tgGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATgtgt > 2:1400316/1‑150 (MQ=255) ggTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAATT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGtt < 1:1132529/150‑1 (MQ=255) gTTAGCAAGGATGCCATTAGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTg < 2:705446/150‑1 (MQ=255) aGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTGGATTACTTTGCGCTAATTATTACACACCAGGTTGCGGACGCGCAGGAGCGGCAGAGGAATGATGTGTTGCCg > 2:1068665/1‑150 (MQ=255) cAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGGCGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTa > 1:343988/1‑150 (MQ=255) gATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGac > 1:767848/1‑150 (MQ=255) ccATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGaccacc < 1:69730/150‑1 (MQ=255) cATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGATAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCt > 2:1544226/1‑150 (MQ=255) gATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGc < 2:341076/150‑1 (MQ=255) aTGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCa > 1:929710/1‑150 (MQ=255) aaTTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACAAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCt > 1:1453211/1‑150 (MQ=255) aaTATGTTGATTCAAAGATGAAATAAAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTAcc < 1:366890/150‑1 (MQ=255) tatGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTc > 1:996077/1‑150 (MQ=255) atGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCg < 2:27945/150‑1 (MQ=255) atGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCg > 1:1578582/1‑150 (MQ=255) gTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCGaa < 2:1196289/150‑1 (MQ=255) gTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCGaa > 1:1007602/1‑150 (MQ=255) ttGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCGAAg < 2:735837/150‑1 (MQ=255) tGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCGAAgg > 2:838725/1‑150 (MQ=255) tGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCGAAgg > 1:83128/1‑150 (MQ=255) gATTCAAAGATTAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCTGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCGAAGGc < 2:838421/150‑1 (MQ=255) ttCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCGAAGGCaa < 2:1645560/150‑1 (MQ=255) cAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCGAAGGCaaaa > 2:301242/1‑150 (MQ=255) aaaGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCGAAGGCAAAAg > 2:1553787/1‑150 (MQ=255) tGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCGAAGGCAAAAGTAggg < 1:988927/150‑1 (MQ=255) aaT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCGAAGGCAAAAGTAGGgcgc > 2:1139544/1‑150 (MQ=255) agtaatcaaGCCCTGGTAACTGCCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCGAAGGCAAAAGTAGGgcgc > 2:537775/8‑150 (MQ=255) aaaaaGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATTACCACCTGCGGCACCTTTACCTTCGAAGGCAAAAGTAGGGCGCTGcc < 1:1073480/150‑1 (MQ=255) caaGCCCTGGTAACTGCCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCGAAGGCAAAAGTAGGGCGCTGCCAg > 2:1126829/2‑150 (MQ=255) aGCCCTTGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCGAAGGCAAAAGTAGGGCGCTGCCAGTc < 2:515069/150‑1 (MQ=255) aGCCCTGGTAACTGCCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTACACTTAGATAGCAAAGGTATGGCGGTGCCAGta > 2:300989/1‑149 (MQ=255) aGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCGAAGGCAAAAGTAGGGCGCTGCCAGTc > 2:1621608/1‑150 (MQ=255) ccTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCGAAGGCAAAAGTAGGGCGCTGCCAGTCACt > 1:575262/1‑150 (MQ=255) ccTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAAAAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACATTCGAAGGCAAAAGTAGGGCGCTGCAAGTCACt > 2:1227951/1‑150 (MQ=255) cTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCGAAGGCAAAAGTAGGGCGCTGCCAGTCACtg < 2:27498/150‑1 (MQ=255) cTGGCAGTTACCAGGGATTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCGAAGGCAAAAGTAGGGCGCTGCCAGTCACtg < 1:1295070/150‑1 (MQ=255) ggCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCGAAGGCAAAAGTAGGGCGCTGCCAGTCACtgtg < 2:1311924/150‑1 (MQ=255) cAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGTTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCGAAGGCAAAAGTAGGGCGCTGCCAGTCACTGTGAc > 1:490831/1‑150 (MQ=255) | ACATATCATGAAACTGGGTATGTTTTGTCTGCCTGCTCTGGGATCGCTGGGGCGGGCA‑TTTTTTTGCCTATTTTGCATTGTTGGTTAGCAAGGATGCCATTCGATGAATTTTAATATGTTGATTCAAAGATGAAAT‑AAAAAAGCCCTGGCAGTTACCAGGGCTTGATTACTTTGAGCTAATTATTACTCAACAGGTTGCGGACGCGCAGGAGCGGCAGAGGCATGATGTGTTGCCGTATGACCACCTGCGGCACCTTTACCTTCGAAGGCAAAAGTAGGGCGCTGCCAGTCACTGTGAC > NC_000913/1140999‑1141297 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |