| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,115,851 | A→C | 6.3% | S16A (TCG→GCG) | wcaM ← | colanic acid biosynthesis protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,115,851 | 0 | A | C | 6.3% | 259.7 / 5.5 | 101 | S16A (TCG→GCG) | wcaM | colanic acid biosynthesis protein |
| Reads supporting (aligned to +/- strand): ref base A (42/51); new base C (4/3); total (46/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.05e-01 | |||||||||||
Only 100 of 102 total aligned reads displayed.
AATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCGTGTTCAACTTTTTCGCGCGCGCGTTTGACGACCG > NC_000913/2115703‑2115998 | aaTCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAg > 1:1186823/1‑150 (MQ=255)aaTCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGATTAAATGAGGCGATCCAGTCGTGTGGGTTTTAGGAGGTAATGTTAACGCTTTGTAGGGCCGGAAGCACCCGGGCGTAA‑GGGGTATGGAGGAACGCAATCGCCGat > 2:204858/1‑149 (MQ=255) caggcaCGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGGCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCg < 1:664659/150‑1 (MQ=255) aggcaCGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCTCGGCGCTTGcctt < 1:516643/150‑3 (MQ=255) ggcaCGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTTGTCGTTAATGTTTACGCGTTGGCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTTTGGAGGAAGGCAAGCGCCGAGCTTGCCggc > 2:1522633/1‑148 (MQ=255) gcaCGACGCGTGGTTGCCGTTCGCTGAAGGCTGGTTTATATGAGGCGATCCTGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGATGCGCGCGGGCGAAA‑TGGGTATGCAGGAAGGCAAGCGCCGAGCTTGCCGTCa < 2:945357/150‑1 (MQ=255) gcaCGACGACTGTTGGCCCTGCGCTGAAGGCTTGTTTAACTGAGGCGATCCAGTCGGGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCTCGGCGCTTGCCTTcc < 1:1083322/150‑2 (MQ=255) caCGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGATGAAGGCAAGCGCCGAGCTTGCCGTCAg > 2:155423/1‑150 (MQ=255) caCGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCTCGGCGCTTGCCTTcct < 1:1127174/150‑3 (MQ=255) caCGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGCTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGGGGAAGGCAAGCGCCGAGCTTGCCGTCAg < 1:1230596/150‑1 (MQ=255) actacgacTGTTTGCCCTTCGCTGAAGGCTTGTGTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAgg < 2:1329592/147‑1 (MQ=255) acgacgACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTTATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGGGAAA‑GGGGGATTGTGGAAGGCAAGCGCCGAGCATGCCGTCAgg > 1:729089/1‑150 (MQ=255) gacgacTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATTTTAACGCTTTGTCGGGCGGGAACCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGCGCATGCCGTCAGGaa > 1:489842/1‑150 (MQ=255) gacgacTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTTACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGaa > 2:143861/1‑150 (MQ=255) acgacTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAAAGATTTTTAGGGCCGGAAGCGCGCGGGCGAAA‑GGGGTATGGTGGAAGGCAAGAGCCGAGCTTGCCGTCAGGAAc > 1:530726/1‑150 (MQ=255) gacTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGt > 1:194517/1‑150 (MQ=255) gcTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGACCGTg > 1:1243960/2‑150 (MQ=255) gTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCgg > 2:519428/1‑149 (MQ=255) cTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTTGTCGTTAATTTTAACGCTTTTTCGGGCGGGTATCGCGCGGGCGAAA‑GGGGTTTGGAGGAAGGCAAGCGCCGAGCTTTGCGTCAGGAACGTGCGTCGGgagt > 1:1349966/1‑149 (MQ=255) tCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCTCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGt < 2:1634712/150‑1 (MQ=255) gCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGttt < 2:1004610/150‑1 (MQ=255) tGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGttttt < 2:504742/150‑1 (MQ=255) gAAGGCTTGTTTAAATGAGGCGATCCCGTCGTGTGGGTGGTAGTCATTAATGTTAACGCTTTGTCGGGCGGTAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGtttttt < 2:1300486/150‑1 (MQ=255) aaGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTa < 2:44680/150‑1 (MQ=255) aaGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTa < 1:361672/150‑1 (MQ=255) aaGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTa < 2:1498094/150‑1 (MQ=255) cggCTTGTATAAATGCGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTaa < 2:1584965/149‑1 (MQ=255) ggCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTaaa < 1:612017/150‑1 (MQ=255) ggCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTaaa > 2:520954/1‑150 (MQ=255) cgtGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATg < 2:14924/148‑1 (MQ=255) cTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATTTTAACCCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTTTGGAGGAAGGCAAGCGCCCAGCGTGCCGTCAGGCACGTGCGTCGGGAGAGTTTTTTTAATg > 2:1381652/1‑150 (MQ=255) gTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTATTAGTTAATGTTTACGGTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑TGGGTATTGAGGAAGGCAAGCTCCGAGCTTGCCGTCAGGAACGTGCGTCGGGTGAGTTTTTTAAATGGCa > 1:804962/1‑150 (MQ=255) aactGAGGCGATCCAGTCGTGTGGGGTGTAGTCGCTAATGTTAACGCCTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCg < 1:1404785/147‑1 (MQ=255) aaTGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAATGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGt < 1:1107830/150‑1 (MQ=255) aTGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGtt > 1:274038/1‑150 (MQ=255) tGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTtc < 1:1473873/150‑1 (MQ=255) tGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTtc > 2:109286/1‑150 (MQ=255) tGAGGCGAGCCAGTCGTGTGGGGTGTAGTCGTTAATGTTTACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGGATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTtc < 1:1664740/150‑1 (MQ=255) aGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAAAGCTTTGTCGGGCGGGCAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTTCGTCGGGAGAGTTTTTTAAATGGCATGCGTtctc > 1:1484325/1‑150 (MQ=255) ggCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCa < 1:1014261/140‑1 (MQ=255) ggCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCa > 2:1014261/1‑140 (MQ=255) ggCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGCTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTctcc < 2:1239363/150‑1 (MQ=255) cGATCCACTCGTGTTGGTTGTAGGCGTAAATGTTATCGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTctcctc < 2:1313439/150‑1 (MQ=255) aTCCAGTCGTGGTGGTTGTAGTCGTTAATGTTTACGCGTTGTCGGGGGGGAAGCGCGGGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGCGCTTGCCGTCCGGAACGTGCGTCGGGAGTGTTTTTTTAATGGCATGCGTTgtcctcgt > 2:797406/1‑148 (MQ=255) ccAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGGCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCtata > 2:104066/1‑150 (MQ=255) gTCGTGTGGGTTGTAGGCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAg < 2:1358690/150‑1 (MQ=255) gcgggggggTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGc < 1:1511982/144‑1 (MQ=255) cGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGcc < 2:1194691/150‑1 (MQ=255) ggTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTgcagc < 2:1330066/150‑1 (MQ=255) ggTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGACAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCAAGCGTTCTCCTCTATAAATCCTgcagc > 1:77119/1‑150 (MQ=255) tGTAGTCGATAATGATAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCaa < 2:952791/150‑1 (MQ=255) cGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGcgtaat > 2:612449/1‑145 (MQ=255) cGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCg < 2:274038/150‑1 (MQ=255) cGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCg > 2:784021/1‑150 (MQ=255) cGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCg > 1:105103/1‑150 (MQ=255) cGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCg > 1:855339/1‑150 (MQ=255) ttAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAg < 2:1193695/150‑1 (MQ=255) ttAATGGTAACGCTATGGCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGCGGAATGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCTGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATCAAGCCTGCAGCAAGCTGGCGAg < 2:176608/150‑1 (MQ=255) tAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGt > 1:899069/1‑150 (MQ=255) gTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTtctc > 1:623872/1‑150 (MQ=255) gTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTtctc > 1:676220/1‑150 (MQ=255) gTTAACGCATTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTGCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTtctc < 1:1621457/150‑1 (MQ=255) ttAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCg < 1:909019/150‑1 (MQ=255) tAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGa < 2:738679/150‑1 (MQ=255) aaCGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGAt > 2:1679405/1‑150 (MQ=255) aaCGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGAt < 1:11127/150‑1 (MQ=255) aaCGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGAt > 2:342260/1‑150 (MQ=255) aCGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGAtt < 2:437109/150‑1 (MQ=255) cGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTg < 1:573966/150‑1 (MQ=255) cTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGAt < 2:1271427/150‑1 (MQ=255) tttGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATc < 1:154804/150‑1 (MQ=255) ttagTCGGGCTGGAAGCGCGCGGGCGAAA‑GGGGTATGGATGAAGTCAAGCGCCGAGCTTGGCGTCAGGTACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATc < 1:762800/147‑1 (MQ=255) gTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCAcc > 2:1232526/1‑150 (MQ=255) gggcgggAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACctgc < 2:1415694/150‑1 (MQ=255) gcgggAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACctgctg < 1:993964/150‑1 (MQ=255) ggAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGtt > 2:1254134/1‑150 (MQ=255) cgcgGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCg < 1:109286/150‑1 (MQ=255) gcgGGCGAAA‑GGGGTATGGTGGAAGGCAAGCGGCGAGCTTGCCGTCAGGATCGTTCGTCGGGTGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATAgt < 1:511675/150‑1 (MQ=255) gcgGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCgt > 2:1477188/1‑150 (MQ=255) cgGGCTAAA‑GGGGTATGGAGGAATGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCgtg < 1:11977/150‑1 (MQ=255) cgGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCgtg < 2:167526/150‑1 (MQ=255) cgGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCgtg < 2:566481/150‑1 (MQ=255) cgGGCGAAA‑GGGGTATGGAGCAAGGCTAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCgtg < 2:157024/150‑1 (MQ=255) gAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCGTGTTCaa > 1:763464/1‑150 (MQ=255) gAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCGTGTTCaa > 1:763466/1‑150 (MQ=255) aTGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCGTGGTCAACTTTTTcgc > 2:71255/1‑150 (MQ=255) tGGAGGAAGGCAAGCGCCGTGCGTGCCGTCAGGACCGTGCGGCGGGAGAGTTATTTTCTTTGCATGCGTTCTCCTCTATAAAGCCTGGAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCGTGTTCAACTTTTTcgcg < 2:875259/150‑1 (MQ=255) gaggaAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCGTGTTCAACTTTTTcgagcg > 2:14943/1‑150 (MQ=255) ctgacggCAAGCTCGGCGCTTGCCTTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCGTGTTCAACTTTTTcgcgcgc > 1:745769/6‑150 (MQ=255) aggaAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCGTGTTCAACTTTTTcgcgcgc > 2:399720/1‑150 (MQ=255) tgacggCAAGCTCGGCGCTTGCCTTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCGATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCGTGTTCAACTTTTTcgcgcgcg > 2:1458212/5‑150 (MQ=255) aGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCGTGTTCAACTTTTTCGCGCGCGCGt > 2:1294815/1‑150 (MQ=255) aGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCGTGTTCAACTTTTTCGCGCGCGCGt > 2:402967/1‑150 (MQ=255) ggCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATGACCTGCTGGTTTAAATCGTGTTCTACTTTTTCGCGCGCGCGtt < 2:487582/150‑1 (MQ=255) cAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCGTGTTCAACTTTTTCGCGCGCGCGTTTg < 2:676220/150‑1 (MQ=255) cAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCGTGTTCAACTTTTTCGCGCGCGCGTTTg > 1:202719/1‑150 (MQ=255) aGCGGCGAGCTCGCCGTCAGGACCGTGCGTCGGTTGAGTTTTTTAAATGGCATGCGTTCTCCTCTTTAAAGCCTGCAGCACGCTGGCGAGTTCTCGAGTGATCACCTGCTGGTTAAAATCGTGTTCAACTTTTTCGCGCGCGCGTTTgtc < 1:204858/150‑3 (MQ=255) gcCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCGAGTTCAACTTTTTCGCGCGCGCGTTTgacgac > 1:259228/1‑150 (MQ=255) ccGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCGTGTTCAACTTTTTCGCGCGCGCGTTTGACGAcc > 1:336953/1‑150 (MQ=255) cGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCGTGTTCAACTTTTTCGCGCGCGCGTTTGACGACCg > 2:686799/1‑150 (MQ=255) | AATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGTTAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAA‑GGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTTCTCGATTGATCACCTGCTGGTTAAAATCGTGTTCAACTTTTTCGCGCGCGCGTTTGACGACCG > NC_000913/2115703‑2115998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |