| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,247,033 | T→C | 7.4% | intergenic (‑264/+30) | cirA ← / ← lysP | colicin IA outer membrane receptor and translocator; ferric iron‑catecholate transporter/lysine transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,247,033 | 0 | T | C | 7.4% | 350.6 / 14.2 | 122 | intergenic (‑264/+30) | cirA/lysP | colicin IA outer membrane receptor and translocator; ferric iron‑catecholate transporter/lysine transporter |
| Reads supporting (aligned to +/- strand): ref base T (47/66); new base C (6/3); total (53/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.48e-01 | |||||||||||
Only 100 of 124 total aligned reads displayed.
TCCCAGAAAGCCGGAACAGCCTCTGATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCC > NC_000913/2246884‑2247180 | tcCCAGAAAGCCGGAACAGCCTCTGATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGtt < 2:1347329/150‑1 (MQ=255) cccAGAAAGCCGGAACAGCCTCTTATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTg < 2:482186/150‑1 (MQ=255) cccAGAAAGCCGGAACAGCCTCTGATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTg < 1:1651018/150‑1 (MQ=255) cccAGAAAGCCGGAACAGCCTCTGATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTg < 2:434464/150‑1 (MQ=255) cccAGAAAGCCGGAACAGCCTCTGATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTg < 2:1187984/150‑1 (MQ=255) ccAGAAAGCCGGAACAGCCTCTGATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTga > 2:714573/1‑150 (MQ=255) aGAAAGCCGGAACAGCCTCTGATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTgaga < 1:579268/150‑1 (MQ=255) taaaGCCGGAACAGCCTCTGATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGagag < 1:1710298/149‑1 (MQ=255) gAAAGCCGGAACAGCCTCTGATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGagag < 1:1419360/150‑1 (MQ=255) aaGCCGGAACTGCCGCTGATTTGTCAGCCTTTTTAGATATCTGCGTAACGATAATGCAAACGATAACAATTATCAAACCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGCAATGGAATTG‑AAAACGCCCTCTCGGTTGAGAggg < 2:256982/150‑1 (MQ=255) aGCCGGAACAGCCTCTGATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGc < 1:553022/150‑1 (MQ=255) gCCGGAACAGCCTCTGATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCAACCGAGAGGGCt < 2:1438972/150‑1 (MQ=255) gCCGGAACAGCCTATGATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCt < 2:604549/150‑1 (MQ=255) ccGGAACAGCCTCTGATTTGTCATCCTTTTTTGATTGCGGCGTAAAGATAATTCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCAACCGAGAGGGCtt < 2:161315/150‑1 (MQ=255) gAACAGCCTCTGATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGc < 2:834151/150‑1 (MQ=255) aaCAGCCTCTGATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCtttttc < 1:1699937/150‑5 (MQ=255) aaCAGCCTCTGATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCAACCGAGAGGGCtttttc < 1:692712/150‑5 (MQ=255) aCAGCCTCTGATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTGAAAAAAGCCCTCTCGGTTGAGAGGGCTTAGCa < 1:1672410/150‑1 (MQ=255) cAGCCTCTGATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCaag < 2:144962/150‑1 (MQ=255) cAGCCTCTGATTTGTAAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCaag < 1:111176/150‑1 (MQ=255) gCCTCTGATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCaagga > 2:621446/1‑150 (MQ=255) gCCTCTGATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCaagga > 2:800267/1‑150 (MQ=255) ccTCTGATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCaaggaa > 2:174065/1‑150 (MQ=255) ctGATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAggg > 2:774467/1‑150 (MQ=255) tGATTTGTCAGCCTTTTTTGATTGCGGAGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGgga < 2:412385/150‑1 (MQ=255) gATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGggag < 1:1018135/150‑1 (MQ=255) aTTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGggagg < 1:621446/150‑1 (MQ=255) ttGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAATCGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGaa < 2:1344758/150‑1 (MQ=255) gTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAAc > 2:522232/1‑150 (MQ=255) cAGCCTTTTTTGATAGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACtt > 2:1340150/1‑150 (MQ=255) cattttttGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTAtt < 1:326513/148‑1 (MQ=255) cTTTTTTGATTGCGGCGTAACGAGAATGCAACCGATACCAATTCTCAAGCCAAAGGTTAAATTTTATATCCGCATGATTTGTCAGGGAAAGGGAATTG‑AAAAAGCCCTCTAGTTTGAGAGGGCGTAGCAAGGAAGGGAGTACACTTAatt > 2:858573/1‑150 (MQ=255) ttttttGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTc < 2:1085802/150‑1 (MQ=255) ttttttGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGACAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTc > 1:1392565/1‑150 (MQ=255) tttttGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCt < 2:451623/150‑1 (MQ=255) tttGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTa < 1:30818/150‑1 (MQ=255) tGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATc > 2:498425/1‑150 (MQ=255) tGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGCGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTAta > 1:1264695/1‑149 (MQ=255) gATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCg < 1:1613900/150‑1 (MQ=255) ggagTAACGATAATGCAAACGATAACAATTATCAAACCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAATCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGc < 1:345561/147‑1 (MQ=255) gTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCggg < 2:1259453/150‑1 (MQ=255) tAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGa > 2:960468/1‑150 (MQ=255) tAACGAAAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAAAGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGa < 2:1100926/150‑1 (MQ=255) cGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACt < 1:611626/150‑1 (MQ=255) gATAATGCAAACGATAACAATTATCAATCCAAATGTTAGATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACtt < 1:504814/150‑1 (MQ=255) gATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGATGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACtt > 2:564664/1‑150 (MQ=255) tAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCa < 2:408577/150‑1 (MQ=255) gCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTc > 1:602289/1‑150 (MQ=255) cAAGCGATAACAATTATCAATCCAAATGTT‑AATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGc > 2:94103/1‑150 (MQ=255) cAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCg < 1:786218/150‑1 (MQ=255) aaaCGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGc > 1:622141/1‑150 (MQ=255) aaaCGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGc > 1:925709/1‑150 (MQ=255) aCGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTg < 1:508191/150‑1 (MQ=255) aCGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTg > 1:579711/1‑150 (MQ=255) cGATAACTATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAATTGTAATTG‑AAAAAGCGCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGt < 2:255595/150‑1 (MQ=255) taaaCAATTATAAATACAAAAGGTAAAATTTACTTCCGCATTCTTTTGCACGGAAATGGAAATT‑AAAAAGCCCTCACGGTTGTGCTGGGCTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAg < 1:733789/148‑1 (MQ=255) aTAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAg < 2:1109950/150‑1 (MQ=255) aaCAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCg > 2:1034000/1‑150 (MQ=255) cAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTa > 2:905555/1‑150 (MQ=255) aaTTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTAc < 2:1425199/150‑1 (MQ=255) aTTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACg < 2:1484436/150‑1 (MQ=255) tATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGaa > 1:1209403/1‑150 (MQ=255) aTCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGat > 1:986610/1‑149 (MQ=255) cAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGGTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTc < 1:1554794/150‑1 (MQ=255) aTGTTAAATTTTATATCCGCATGATTTGTCTGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCtt < 1:248667/150‑1 (MQ=255) aTGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCtt < 2:1349230/150‑1 (MQ=255) aTGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCtt < 2:1218553/150‑1 (MQ=255) tGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCttt < 1:774467/150‑1 (MQ=255) ttAAATTTTATATCCGCATTATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGGTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGTGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTaa < 1:1222329/150‑1 (MQ=255) aTTTTATATCCGCATGATTTGACAGGGAAATTGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGTAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGAACGAAGTGAGTTCCTTTAATCac > 2:389226/1‑149 (MQ=255) tttATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCt < 1:1415858/150‑1 (MQ=255) tttATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCt < 1:924832/150‑1 (MQ=255) ttATATCCTAATGATTTTTCAGTGAATTTTAATTG‑AAAAAGCACTATCGGGTTAGAGGGCTTAGCAAGGAAGGTAGGAAACTTATTTCTTATCGTTATGCTGGAACTTCATTTAGCTGTAGCGTACTAAGTGAGTTCCTTTAATCAGCtt < 1:1559511/150‑1 (MQ=255) atatCCGGAGGATTTGGCACGGAAATGGAATTG‑AAACAGCCCTCTGGGTTGAGAGGGCTTATCTATGAAGGGTGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGt < 1:1068496/150‑1 (MQ=255) atCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAg > 1:798859/1‑150 (MQ=255) tCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGc < 1:473079/150‑1 (MQ=255) aTGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAAc > 2:514281/1‑150 (MQ=255) tGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAAcc > 2:40378/1‑150 (MQ=255) gTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAaataa > 1:1023723/1‑150 (MQ=255) gTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAaataa > 2:1707011/1‑150 (MQ=255) gggAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAg > 1:1616809/1‑150 (MQ=255) ggAAATGGATTTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAgg < 2:554033/150‑1 (MQ=255) taaaTGTAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGCGAACATAATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGa < 1:93798/149‑1 (MQ=255) aaTGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAAc < 2:525995/150‑1 (MQ=255) ggAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGc < 1:458997/150‑1 (MQ=255) gAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCg > 2:51463/1‑150 (MQ=255) aTTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGATCCTTTAATCAGCTTGTAGCCGAACCAAATAATCATGAACTGCggg > 2:302031/1‑150 (MQ=255) tgctaaGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATa > 1:1342125/5‑150 (MQ=255) gctaaGCCCTCTCAACCGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATAc > 1:914878/4‑150 (MQ=255) gctaaGCCCTCTCAACCGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGAAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATAc > 2:1283582/4‑150 (MQ=255) ctaaGCCCTCTCAACCGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGCACAGCGGGATAcc > 2:1587352/3‑150 (MQ=255) ctaaGCCCTCTCAACCGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATAcc > 1:96527/3‑150 (MQ=255) aaaaGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATAcc < 2:1300551/150‑1 (MQ=255) aGCCCTCTCAACCGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAat > 1:1249560/1‑150 (MQ=255) aGCCCTCTCAACCGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAat > 1:627464/1‑150 (MQ=255) ctctCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATAc < 2:602289/150‑1 (MQ=255) tctcGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACg < 1:105226/150‑1 (MQ=255) ctcGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGt > 2:1175634/1‑150 (MQ=255) ggTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGc < 2:622141/150‑1 (MQ=255) gTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGcc > 1:87479/1‑150 (MQ=255) | TCCCAGAAAGCCGGAACAGCCTCTGATTTGTCAGCCTTTTTTGATTGCGGCGTAACGATAATGCAAACGATAACAATTATCAATCCAAATGTTAAATTTTATATCCGCATGATTTGTCAGGGAAATGGAATTG‑AAAAAGCCCTCTCGGTTGAGAGGGCTTAGCAAGGAAGGGAGGAAACTTATTTCTTATCGTTCTGCGGGAACTTCATTTCGCTGTAGCGTACGAAGTGAGTTCCTTTAATCAGCTTGTAGCCGAACCAAATAATCAGGAACAGCGGGATACCAATATACGTTGCC > NC_000913/2246884‑2247180 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |