| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 610117 = | NA (NA) | 9 (0.020) | 4/264 | NT | NA | noncoding (1/98 nt) | RIP54 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP54 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site |
| ? | NC_000913 | = 3639281 | NA (NA) | noncoding (73/98 nt) | RIP261 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP261 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | |||||
CCAATTCAATATATTGCAGGACCATGTAGGCCTGATAAGCGTAGCGCATCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/610170‑610117‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaggcCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACAGGAA < NC_000913/3639281‑3639133 CCAATTCAATATATTGCAGGACCATGTAGGCCTGATAAGCGTAGCGCATCAGGCCTACATGGTC‑CTGCAATATATTGAATTGGCAAGATTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACGACGCGCACTTTGTCAa > 2:2628292/1‑149 TGTAGGCCTGATAAGCGTAGCGCATCAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCC > 1:3536988/1‑150 TGTAGGCCTGATAAGCGTAGCGCATCAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGAGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCC > 1:7072764/1‑150 GCCTGATAAGCGTAGCGCATCAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCG > 1:9922695/1‑150 GCCTGATAAGCGTAGCGCATCAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCG > 1:641039/1‑150 GCCTGATAAGCGTAGCGCATCAGGCCTACATAATCTCTGCAATCTATTGAAGTTGCATG‑GTTTTGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCG > 2:232044/1‑150 GCCTGATAAGCGTAGCGCATCAGGCCTACAAAATCTCAGCAATCTATTGAATTTGCATG‑TTTTAGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAAGCTGAAGCGGGCCCGCTGACCCGCACG > 2:6775292/1‑150 CTGATAAGCGTAGCGCATCAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTT > 1:2187908/1‑150 CTGATAAGCGTAGCGCATCAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTT > 1:5721912/1‑150 cTCAGGCCTACATCCTCTCTGCAATCTATTGAATTTGCATG‑TTTTTGGAGGCCGGATAAGGCGTTCTCGCCGGATCCGGCATGAACAACGCGGACTCTGTCACAATCTGACGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGTTTA < 2:6830689/149‑1 cTCAGGCCTACATACTCTCGGCAATCTATTGTATTTGGATG‑TTTTTGTAGGCCGGTTAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCGGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTA < 2:4069003/149‑1 ATCAGGCCTACATTATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTA < 2:4068947/150‑1 ATCAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTA < 2:9806518/150‑1 ATCAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTA < 2:6999591/150‑1 ATCAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTA < 2:1957228/150‑1 ATCAGGCCTACATAATCACTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTA < 2:3492803/150‑1 TCAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTAC > 2:342435/1‑150 TCAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTAC > 2:295813/1‑150 TCAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTAC > 2:295612/1‑150 CAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCTCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACA < 2:7272542/150‑1 CAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACA < 2:7329455/150‑1 CAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACA < 2:7272799/150‑1 CAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACA < 2:6446891/150‑1 CAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACA < 1:3105883/150‑1 CAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACA < 2:1615331/150‑1 CAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACA < 1:400313/150‑1 CAGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACA < 1:3345007/150‑1 AGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACAG < 1:5875808/150‑1 AGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACAG < 1:7555511/150‑1 AGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACAG < 1:5046954/150‑1 AGGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGGTTTGGTGCGTACGATTACAG > 1:2456471/1‑150 GGCCTTCATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACATAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACAGG < 1:5936707/150‑1 GGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACAGG > 2:8649841/1‑150 GGCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACAGG < 1:5936578/150‑1 GCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGGTAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAGTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGGGTTCGATTACAGGA > 1:2599233/1‑150 GCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGGTAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGGGTACGATTACAGGA > 1:2599216/1‑150 GCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGGTAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACAGGA > 1:8030995/1‑150 GCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACAGGA > 1:1149491/1‑150 GCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACAGGA > 1:4058919/1‑150 GCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACAGGA > 1:6222941/1‑150 GCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACAGGA < 2:6634534/150‑1 GCCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGACCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACAGGA > 1:2493986/1‑150 CCTACATCATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCCCGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACAGGAA < 1:4896215/150‑1 CCTACATAATCTCTGCAATCTATTGATTTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACAGGAA < 1:3140207/150‑1 CCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACAGGAA < 2:6898795/150‑1 CCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACAGGAA < 2:2360877/150‑1 CCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACAGGAA < 2:7948420/150‑1 CCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACAGGAA < 1:4546712/150‑1 CCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACAGGAA > 2:9606484/1‑150 CCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCACACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACAGGAA < 2:8188812/150‑1 CCAATTCAATATATTGCAGGACCATGTAGGCCTGATAAGCGTAGCGCATCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/610170‑610117‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaggcCTACATAATCTCTGCAATCTATTGAATTTGCATG‑TTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCACTATGTCACAATCTGAAGCGGGCCAGCTGACCCGCTCGTTTTGGTGCGTACGATTACAGGAA < NC_000913/3639281‑3639133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |