| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,807,091 | T→C | 7.7% | intergenic (+17/‑41) | proW → / → proX | glycine betaine/proline ABC transporter permease/glycine betaine/proline ABC transporter periplasmic binding protein; cold shock protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,807,091 | 0 | T | C | 7.7% | 366.9 / 16.6 | 131 | intergenic (+17/‑41) | proW/proX | glycine betaine/proline ABC transporter permease/glycine betaine/proline ABC transporter periplasmic binding protein; cold shock protein |
| Reads supporting (aligned to +/- strand): ref base T (62/57); new base C (6/4); total (69/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.07e-01 | |||||||||||
Only 100 of 132 total aligned reads displayed.
GGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCA > NC_000913/2806943‑2807240 | gggATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTg < 2:868147/150‑1 (MQ=255) ggATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGa < 2:1441436/150‑1 (MQ=255) tgATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCgg > 2:575025/1‑150 (MQ=255) gATCCTCGCCATTATCCTCGATCGTCTGCCGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCGCTGTTGGTCTGCGGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGGGccgccgcg > 1:158930/1‑148 (MQ=255) gATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCCCTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCggg > 1:130568/1‑150 (MQ=255) gATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCCCTGGCCCTGTTGGTCTGCTGACCCGCCCAGTCAATAACTAACTCTGCACTTGCCCGGTGACGCCggg > 1:1132955/1‑150 (MQ=255) aTCCTCGCCATTCTCCTCGATCGTCTGTCGCAGGCCGTTGGGCGCGACTCACGCAGGCGCGGCAACCGTCGCTGGTACCCCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGc < 2:75406/150‑1 (MQ=255) tCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGCGTCACCGGGCa < 1:662754/150‑1 (MQ=255) ccTCGCCTTTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTTGTACACCACTGGCCCTGTTGGTCTGCTGACCAGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCAt < 1:1209551/150‑1 (MQ=255) cTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGCGTCACCGGGCaag > 2:1133072/1‑148 (MQ=255) tCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGCGTCACCGGGCaagt < 1:1743946/150‑4 (MQ=255) tCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGCGTCACCGGGCaagt < 2:1252687/150‑4 (MQ=255) cATTATCCTCGATCGTCAGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCAGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAACTAACTCTGCACTTGCCCGGTGACGCCGGGCAATATAAc > 2:1493652/1‑150 (MQ=255) aTTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCAcc > 1:1469697/1‑150 (MQ=255) aTCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑aaaaa > 1:1459424/1‑150 (MQ=255) cGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑aaaaaaa > 1:494431/1‑150 (MQ=255) cTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGa > 1:672988/1‑150 (MQ=255) tGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGaa < 1:511267/150‑1 (MQ=255) gACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGCCCCGCCCATTCATGAACTAACTCTGCCCTTGCCCGGTGCCGCCGGGCATTATCACCCTGGC‑AAAACAAGGAAt > 2:354325/1‑150 (MQ=255) gACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCGCCCGGCC‑AAAAAAAGGAAt > 2:973935/1‑150 (MQ=255) aCGCAGGCCGTTGGGCGCGACTCACGCAGGCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATa < 1:1089623/150‑1 (MQ=255) ttGGGCGCGACTCACGCAGTCGCGGCATCCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGGGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGAc < 2:1006387/150‑1 (MQ=255) gcgcGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAg < 2:1042922/150‑1 (MQ=255) gcgACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCg < 1:347282/150‑1 (MQ=255) cTCACGCAGTCGCGGCACCCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCAGTCATTAAGTAACTCTGCACTTGCCCGGTGCCGCCGGGCATTCTCACCCTGCC‑AAAAAAAGGAATAACAATGCGACGTAGCGTACt > 1:1093469/1‑150 (MQ=255) cACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGCCCCGCCCAGTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACttt > 1:59527/1‑150 (MQ=255) cACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACttt > 2:890827/1‑150 (MQ=255) aCGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACtttt > 1:759053/1‑150 (MQ=255) aGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCg < 2:1606831/150‑1 (MQ=255) aGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCg > 2:233106/1‑150 (MQ=255) aGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCg < 2:59085/150‑1 (MQ=255) cAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGtt > 2:484886/1‑150 (MQ=255) aacGTCGCTGGTACACCACTTGCCCTTTTTGTCTGCTGTCGCGCCCAATCATTAAGTAACTATGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACATCGTTTg < 1:21562/148‑1 (MQ=255) ccGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGc < 2:1251462/150‑1 (MQ=255) cGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGcc < 2:978026/150‑1 (MQ=255) gTCGCTGGTACACCACTGGCCCTGTTGGGCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCa < 1:1136401/150‑1 (MQ=255) cTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCt < 2:918343/150‑1 (MQ=255) tGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCtt > 1:1358763/1‑150 (MQ=255) tACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTAtc < 1:1309016/150‑1 (MQ=255) caccacTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTAtctc < 1:8088/150‑1 (MQ=255) accacTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATctct > 1:855989/1‑150 (MQ=255) accacTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATctct > 2:417080/1‑150 (MQ=255) accacTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTGATctct > 2:318596/1‑150 (MQ=255) accacTGGCCCTGGTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATctct < 1:1794715/150‑1 (MQ=255) ggCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACaa > 2:1274666/1‑150 (MQ=255) gCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACaaa < 1:173630/150‑1 (MQ=255) gCCCTGTTGGGCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACaaa < 1:168122/150‑1 (MQ=255) ccTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACt < 1:1428248/150‑1 (MQ=255) cTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACtt > 1:1584038/1‑150 (MQ=255) cTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACtt < 2:1184046/150‑1 (MQ=255) cTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAAGAACAATGCGCCATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACtt > 1:1615248/1‑150 (MQ=255) cTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTAGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACtt > 1:1608087/1‑150 (MQ=255) tGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACttt > 1:33697/1‑150 (MQ=255) ttgTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTTCC‑AAAAAAAGGAATAACAATGCTACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTtgc < 1:722914/148‑1 (MQ=255) tGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTtgc < 2:130568/150‑1 (MQ=255) ggTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTAGTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTtgct > 1:1482485/1‑150 (MQ=255) ggTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTAGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTtgct > 1:223236/1‑150 (MQ=255) ctgctgACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGcc < 1:426766/150‑1 (MQ=255) tgctgACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCg > 2:626376/1‑150 (MQ=255) gctgACCCGCCGATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGa < 2:1133658/150‑1 (MQ=255) ctgACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCAAAAAAAAGGAATAACACTGCGACATAGCGGACTTTTTGCGACAGCGATTGCCACGCTTATCTCTCCACAACCTTTTGCTGCCGa > 1:245221/1‑150 (MQ=255) ctgACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGAt < 1:679602/150‑1 (MQ=255) gACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCAACGCTTATCTCTACACAAACTTTTGCTGCCGATCt > 1:973232/1‑150 (MQ=255) aCCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTg > 2:1532871/1‑150 (MQ=255) aCCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTg > 1:643215/1‑150 (MQ=255) cccGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGc > 2:1755253/1‑150 (MQ=255) cGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGcct > 1:666063/1‑149 (MQ=255) gCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCgg < 2:1477652/150‑1 (MQ=255) gCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCgg > 2:573910/1‑150 (MQ=255) cattcattAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCa < 1:487363/150‑1 (MQ=255) cattcattAAGTAACTCTGCACTTGCCCGGTGACGCCGGGAATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTATGCGACAGAGTTTGCCACGCTTATCTCTACACATACTTTTGCTGCCGATCTGCCGGGCa > 2:131237/1‑150 (MQ=255) tcattAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAg < 1:890827/150‑1 (MQ=255) ttAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGTAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCa < 2:1821042/150‑1 (MQ=255) tAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCAt > 2:1550658/1‑150 (MQ=255) aaGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGTAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCAtt < 2:820797/150‑1 (MQ=255) aGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCCCCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTa > 1:114156/1‑150 (MQ=255) aGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTa > 2:947792/1‑150 (MQ=255) aGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTa > 2:767237/1‑150 (MQ=255) tAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACt < 1:627425/150‑1 (MQ=255) aaCTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTg > 2:1672362/1‑150 (MQ=255) aCTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGt < 2:725269/150‑1 (MQ=255) ctctGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGtt > 1:745946/1‑150 (MQ=255) ctctGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGtt > 1:711089/1‑150 (MQ=255) ctGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTaa > 1:442215/1‑150 (MQ=255) tGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAAt < 2:595720/150‑1 (MQ=255) cACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATcc < 2:162474/150‑1 (MQ=255) cACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATcc < 2:19594/150‑1 (MQ=255) atGCCCGGCGTCACCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGt > 1:385114/2‑150 (MQ=255) tGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTTTCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTAGTGTTAATCCAGtt > 1:731746/1‑150 (MQ=255) tGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGtt > 2:1813092/1‑150 (MQ=255) tGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGATGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGtt > 2:1356566/1‑150 (MQ=255) gCCCGGCGTCACCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTc > 1:818140/1‑150 (MQ=255) gCCCGGCGTCACCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGAGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCAGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTc > 2:394101/1‑150 (MQ=255) cccGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCa > 1:37873/1‑150 (MQ=255) cccGGCGTCACCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCa > 2:780068/1‑150 (MQ=255) ccGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCag < 2:59527/150‑1 (MQ=255) ggTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCagag < 2:713140/150‑1 (MQ=255) gTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGc < 2:1459424/150‑1 (MQ=255) gTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGc > 1:721939/1‑150 (MQ=255) tGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCa > 1:1020385/1‑150 (MQ=255) | GGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCA > NC_000913/2806943‑2807240 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |