| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,807,095 | G→A | 7.6% | intergenic (+21/‑37) | proW → / → proX | glycine betaine/proline ABC transporter permease/glycine betaine/proline ABC transporter periplasmic binding protein; cold shock protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,807,095 | 0 | G | A | 7.6% | 406.8 / 13.0 | 131 | intergenic (+21/‑37) | proW/proX | glycine betaine/proline ABC transporter permease/glycine betaine/proline ABC transporter periplasmic binding protein; cold shock protein |
| Reads supporting (aligned to +/- strand): ref base G (64/57); new base A (6/4); total (70/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 132 total aligned reads displayed.
TGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCA > NC_000913/2806950‑2807243 | tgATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCgg > 2:575025/1‑150 (MQ=255)tgATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCAATAATTAACTCTGCACTTGCCCGGTGACGCCgg > 2:1696453/1‑150 (MQ=255) gATCCTCGCCATTATCCTCGATCGTCTGCCGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCGCTGTTGGTCTGCGGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGGGccgccgcg > 1:158930/1‑148 (MQ=255) gATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCCCTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCggg > 1:130568/1‑150 (MQ=255) gATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCCCTGGCCCTGTTGGTCTGCTGACCCGCCCAGTCAATAACTAACTCTGCACTTGCCCGGTGACGCCggg > 1:1132955/1‑150 (MQ=255) ccTCGACATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGAACTCCACTGGCCCTCTGGGTCTGCGGCCCCGCCCATTCATTAAGAACCTGTGCTCTTCCCCGGTGACGCCGGGCag > 2:188450/1‑149 (MQ=255) cTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGCGTCACCGGGCaag > 2:1133072/1‑148 (MQ=255) cATTATCCTCGATCGTCAGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCAGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAACTAACTCTGCACTTGCCCGGTGACGCCGGGCAATATAAc > 2:1493652/1‑150 (MQ=255) ttATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCAccc < 2:1490236/150‑1 (MQ=255) aTCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑aaaaa > 1:1459424/1‑150 (MQ=255) cGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑aaaaaaa > 1:494431/1‑150 (MQ=255) cTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGa > 1:672988/1‑150 (MQ=255) tGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGaa < 1:511267/150‑1 (MQ=255) gACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCGCCCGGCC‑AAAAAAAGGAAt > 2:973935/1‑150 (MQ=255) aCGCAGGCCGTTGGGCGCGACTCACGCAGGCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATa < 1:1089623/150‑1 (MQ=255) cGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCg < 2:487702/150‑1 (MQ=255) ttGGGCGCGACTCACGCAGTCGCGGCATCCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGGGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGAc < 2:1006387/150‑1 (MQ=255) ttGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTACGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGAc < 1:700115/150‑1 (MQ=255) gcgcGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAg < 2:850314/150‑1 (MQ=255) gcgACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCg < 1:347282/150‑1 (MQ=255) cTCACGCAGTCGCGGCACCCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCAGTCATTAAGTAACTCTGCACTTGCCCGGTGCCGCCGGGCATTCTCACCCTGCC‑AAAAAAAGGAATAACAATGCGACGTAGCGTACt > 1:1093469/1‑150 (MQ=255) cTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACt > 2:594819/1‑150 (MQ=255) cACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGGCCATTCTTTAAGGACCTCTGCACTTGCCCGGTGACGCCGGGCCTTATCACCCTGCC‑AAAAACAGGAATCACAGGGCGACATAGCGTGCttt > 1:147256/1‑150 (MQ=255) cACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACttt > 2:890827/1‑150 (MQ=255) cAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGc < 1:775124/150‑1 (MQ=255) aGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCg < 2:1606831/150‑1 (MQ=255) aGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCg > 2:233106/1‑150 (MQ=255) cgGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGc > 1:1598011/1‑150 (MQ=255) gCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGt < 1:665547/150‑1 (MQ=255) aacGTCGCTGGTACACCACTTGCCCTTTTTGTCTGCTGTCGCGCCCAATCATTAAGTAACTATGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACATCGTTTg < 1:21562/148‑1 (MQ=255) ccGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGc < 2:1251462/150‑1 (MQ=255) cGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGcc < 2:978026/150‑1 (MQ=255) gTCGCTGGTACACCACTGGCCCTGTTGGGCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCa < 1:1136401/150‑1 (MQ=255) cTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCt < 2:918343/150‑1 (MQ=255) tACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTAtc < 1:1309016/150‑1 (MQ=255) caccacTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTAtctc < 2:1434531/150‑1 (MQ=255) caccacTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTAtctc < 1:8088/150‑1 (MQ=255) accacTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATctct > 2:417080/1‑150 (MQ=255) accacTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTGATctct > 2:318596/1‑150 (MQ=255) accacTGGCCCTGGTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATctct < 1:1794715/150‑1 (MQ=255) ccacTGGCCCTGTGGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCTCTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTa < 1:864992/150‑1 (MQ=255) ggCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACaa > 2:1274666/1‑150 (MQ=255) gCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACaaa < 1:173630/150‑1 (MQ=255) gCCCTGTTGGGCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACaaa < 1:168122/150‑1 (MQ=255) ccTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACt < 1:1428248/150‑1 (MQ=255) cTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACtt < 2:1184046/150‑1 (MQ=255) cTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTAGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACtt > 1:1608087/1‑150 (MQ=255) tGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACttt > 1:33697/1‑150 (MQ=255) tGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTtgc < 2:130568/150‑1 (MQ=255) ggTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTAGTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTtgct > 1:1482485/1‑150 (MQ=255) ctgctgACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGcc < 1:426766/150‑1 (MQ=255) gctgACCCGCCGATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGa < 2:1133658/150‑1 (MQ=255) ctgACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCCAAAAAAAAGGAATAACACTGCGACATAGCGGACTTTTTGCGACAGCGATTGCCACGCTTATCTCTCCACAACCTTTTGCTGCCGa > 1:245221/1‑150 (MQ=255) ctgACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGAt < 2:759053/150‑1 (MQ=255) tgACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATc < 2:1598011/150‑1 (MQ=255) gACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCAACGCTTATCTCTACACAAACTTTTGCTGCCGATCt > 1:973232/1‑150 (MQ=255) aCCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTg > 1:643215/1‑150 (MQ=255) aCCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTg > 2:1532871/1‑150 (MQ=255) cccGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGc > 2:1755253/1‑150 (MQ=255) cGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGcct > 1:666063/1‑149 (MQ=255) gCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCgg > 2:573910/1‑150 (MQ=255) cccATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCggg > 1:725269/1‑150 (MQ=255) cccATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCggg > 1:1235584/1‑150 (MQ=255) ccATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑‑AAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCa > 1:1815034/1‑150 (MQ=255) cattcattAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCa < 1:487363/150‑1 (MQ=255) tcattAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAg < 1:890827/150‑1 (MQ=255) cattAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAgg > 1:1723848/1‑150 (MQ=255) cattAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAgg < 2:390956/150‑1 (MQ=255) aGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCCCCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTa > 1:114156/1‑150 (MQ=255) aGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTa > 2:767237/1‑150 (MQ=255) aGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTa > 2:947792/1‑150 (MQ=255) gTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTAc > 1:289725/1‑150 (MQ=255) tAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACt < 1:627425/150‑1 (MQ=255) aaCTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTg < 1:389451/150‑1 (MQ=255) aCTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGt < 2:725269/150‑1 (MQ=255) aCTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGt < 2:1235584/150‑1 (MQ=255) ctctGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGtt > 1:596649/1‑150 (MQ=255) ctctGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGtt > 1:745946/1‑150 (MQ=255) ctctGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGtt < 2:1121879/150‑1 (MQ=255) ctctGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGtt > 1:711089/1‑150 (MQ=255) ctctGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGtt > 2:128141/1‑150 (MQ=255) tGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAAt < 2:595720/150‑1 (MQ=255) gataatGCCCGGCGTCACCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATc > 1:1368322/6‑150 (MQ=255) cACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATcc < 2:19594/150‑1 (MQ=255) cACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATcc < 2:162474/150‑1 (MQ=255) atGCCCGGCGTCACCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGt > 1:385114/2‑150 (MQ=255) tGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTTTCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTAGTGTTAATCCAGtt > 1:731746/1‑150 (MQ=255) tGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGtt > 2:1813092/1‑150 (MQ=255) tGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGATGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGtt > 2:1356566/1‑150 (MQ=255) gCCCGGCGTCACCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTc > 1:818140/1‑150 (MQ=255) gCCCGGCGTCACCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGAGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCAGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTc > 2:394101/1‑150 (MQ=255) cccGGCGTCACCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCa > 2:780068/1‑150 (MQ=255) ccGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCag < 2:59527/150‑1 (MQ=255) ggTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCagag < 2:713140/150‑1 (MQ=255) ggTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCagag < 2:711089/150‑1 (MQ=255) gTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGc > 1:721939/1‑150 (MQ=255) gTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGc < 2:1459424/150‑1 (MQ=255) tGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCa > 1:1020385/1‑150 (MQ=255) cGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCa < 1:1474023/150‑1 (MQ=255) cGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTAAGAGCACCa > 1:1182777/1‑150 (MQ=255) | TGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAACTCTGCACTTGCCCGGTGACGCCGGGCATTATCACCCTGCC‑AAAAAAAGGAATAACAATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCA > NC_000913/2806950‑2807243 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |