| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,959,482 | A→C | 5.1% | intergenic (+37/+50) | ilvC → / ← ppiC | ketol‑acid reductoisomerase, NAD(P)‑binding/peptidyl‑prolyl cis‑trans isomerase C (rotamase C) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,959,482 | 0 | A | C | 5.1% | 558.0 / 2.9 | 202 | intergenic (+37/+50) | ilvC/ppiC | ketol‑acid reductoisomerase, NAD(P)‑binding/peptidyl‑prolyl cis‑trans isomerase C (rotamase C) |
| Reads supporting (aligned to +/- strand): ref base A (73/111); new base C (11/3); total (88/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.04e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 229 total aligned reads displayed.
ACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGA > NC_000913/3959333‑3959629 | aCGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCcaca < 2:3268133/150‑1 (MQ=255) cGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACag < 1:4147480/150‑1 (MQ=255) cGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACag < 1:977366/150‑1 (MQ=255) cGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACag < 1:1522556/150‑1 (MQ=255) gggCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGTGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGTTATGAAAGGTATTGCTGTTGCGGGTTAAGTGGGCGCTGATGGCC‑TCACCCCGTGCCTCTACCACagg > 2:3330811/1‑150 (MQ=255) gggCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGGCC‑GCACCCCCACCCACACCCACagg > 2:206829/1‑150 (MQ=255) aaCTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACagggaga < 1:106506/150‑1 (MQ=255) aaCTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACagggaga < 1:3785815/150‑1 (MQ=255) cTGCGAGATGTGAACGAAGCGATACGCAGCCAAGCGATTGAGCAGGAAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAAAGTATTGCTGTTCCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACagggagagg < 2:4215492/150‑1 (MQ=38) attcGTGATGTGAACTAAGCGATTCGCAGCAATGCGATTGAGCAGGTATGTAAGAAACTTCGCTGATATATGTCAGATATGAAACGTATTTCTGTTGCGGGTTAATTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACagggagagg < 2:2868608/147‑1 (MQ=37) gCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACagggagaggga < 1:351252/150‑1 (MQ=255) ttgtgAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACTGATTTGAAACGTATTGCTGTTGCGGTTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACCGGGAGAGGGAGaaaa < 1:1319319/149‑1 (MQ=255) aTGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGaaaa < 1:3445946/150‑1 (MQ=255) aTGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGaaaa < 1:2824636/150‑1 (MQ=255) gtgAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGATAGGGAGAAAaca < 1:777406/150‑1 (MQ=255) gtgAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCC‑TCACCCCCACCCACACCCACAGGGGGTGGGAGaaaaaa > 1:1456617/1‑148 (MQ=255) aaCGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTc < 2:3868407/150‑1 (MQ=255) aaCGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTc < 2:1755397/150‑1 (MQ=255) aaCGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTc < 2:3107776/150‑1 (MQ=255) aaCGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCC‑GCACCCCCCCCCGCGCCCCCCCGGCGCGGGCGAAAacacgc > 2:3035947/1‑148 (MQ=255) aCGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCC‑TCACCCCGACCCACACCCCCAGGGAGGGGGAGAAAAcacaca > 1:2323017/1‑150 (MQ=255) cGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCaa < 1:186058/150‑1 (MQ=255) gAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAg < 1:3131332/150‑1 (MQ=255) gAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCCACCCACACCCACAGGGAGAGGGAGTAAAAACACAAg > 1:2989321/1‑150 (MQ=39) gAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGGCC‑ACACCCCCACCCACACCCACACGGAGAGGGAGGAAAAACTaaat > 1:3254865/1‑149 (MQ=255) gAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCC‑ACACCCCCACCCACTCCCACACGGCGAGGGGGAAAACACACaac > 1:44433/1‑149 (MQ=255) agagATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGc < 2:3737658/147‑1 (MQ=255) aGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGc < 2:597473/150‑1 (MQ=255) gCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑ACACCCCCACCCTAACCCCCACCGAGATGGCGAAAAAACACAAGGcc > 2:449925/1‑150 (MQ=255) gCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGGCC‑GCACCCCCCCCCAAAACCACCGGGGGAGGGAGAAAACACTAAAGGcc > 2:449850/1‑150 (MQ=255) aTTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTtc < 1:1596020/150‑1 (MQ=255) cGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTcc < 1:4118941/150‑1 (MQ=255) cGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTcc < 1:4034832/150‑1 (MQ=255) gCATCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGATAAAACACTCAAGGCCTTCTCCt < 2:2541144/150‑1 (MQ=255) gCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCCACCCGCACCCACACGGAGAGGGAGAAAACACACAATGCCGTCTccg > 1:3942068/1‑149 (MQ=38) cAGCCATGCGATTGAGTAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑ACACCCCGACCCCCACCCCCACGGCCCGGGAGAAAACACTCAAGGCCTACTccgg > 2:3327091/1‑148 (MQ=255) cAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTg < 2:2425018/150‑1 (MQ=255) gCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGga < 1:2014949/150‑1 (MQ=255) aTGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGaa < 1:1136879/150‑1 (MQ=255) aTGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGaa < 1:2690561/150‑1 (MQ=255) tGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCGACACCCC‑CCCCACACCCACACCGCGAGGGCGAAAAAACACAAAGCCTTAACCAGGAGAAg > 2:2933358/1‑150 (MQ=255) gCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAgg < 1:2636121/150‑1 (MQ=255) cGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGc < 2:2141224/150‑1 (MQ=255) gATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCAGGAGAAGGcc < 1:1697065/150‑1 (MQ=255) gATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCC‑GCACCCCCCCCCACACCCACCCGGAGAGGGCGGAAAAAAACAAGGCCCTCGACGGGAGAAgggc > 1:40265/1‑148 (MQ=255) aTTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCGCACCCACAGGGAGAGGGAGAAAACACACAAGGCCATCTCCGGGAGCAGGccg > 1:2767794/1‑149 (MQ=38) aTTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCCACCCTCAACCACAGGGAGAGGGAGAAAACACACAAGGCCATCTCCAGGAGAAGGCCt > 2:2243330/1‑150 (MQ=38) ttGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCAGGAGAAGGCCtt < 2:490661/150‑1 (MQ=255) tGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTg < 2:1306830/150‑1 (MQ=255) aGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGGTAAGTGCGCGCTGAGGCCC‑TCACCCCGACCCACTCCCACAGGGTGGGGGAGAAAAAACGCAATGCCTTATCCGGGCGACGGCCGTGcg > 1:2838079/1‑149 (MQ=255) gCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTa < 1:2066539/150‑1 (MQ=255) aggtaggtAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCGC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTAtt < 1:3224725/150‑1 (MQ=255) gtaggtaAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACCGGGAGAGGGCGAAAACACTCAAGGCCTTCTCCGGGAGTAGGCCTTTCTATTAg > 2:1362499/1‑150 (MQ=38) taAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTAATAGTAGCg > 2:2750980/1‑150 (MQ=255) taAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCC‑GCCCCCCCCCCCGCACCCCCACGGGGGGGGGGAAAACACACAAGGCCGTATCCGGGGGCAGGCCGGGCGATTAGGTGCg > 1:1873978/1‑150 (MQ=255) aaGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCgg < 2:3594418/150‑1 (MQ=255) aaGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCgg < 1:3564995/150‑1 (MQ=255) aGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑GCACCCCCACCCACACCCACAGGGAGTGGGCGAAAAAACACAAGGCCAACTCCAGGAGAAGGCCCTGCTAATAGTTGCGGt > 2:3361235/1‑150 (MQ=255) aaaCTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑ACACCCCCACCCGCTCCCACACGGGGAGGGAGAAAAAACACAAAGCCATCACCAGGAGAAAGCCGTGCGATTAGTTTCGGttc > 2:67035/1‑148 (MQ=255) aaaCTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCC‑TCACCCCGACCCGCACCCCCAGGGAGGGGGAGGAAAAAATAAAGGCCTTCAACGGGTGAATGCCGTGGGATTATTTGCGGTAc > 1:491141/1‑150 (MQ=255) cTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGc < 1:245778/150‑1 (MQ=255) tGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCa < 2:4121575/150‑1 (MQ=255) gcgGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGGCC‑GCACCCCCACCCACGACCACAGGGAGGGGGGGAAAAAACAAAAAGCCGTCTACAGGAGAAGGGCGGTCGATTAGTTGCGGGTCAGCAcca > 1:3335039/1‑149 (MQ=255) ggCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCATATCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCttt > 1:3065491/1‑149 (MQ=255) ggCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCC‑TCACCCCGACCCACAACCACACGGAGAGGGAGAAAACACACAAGGCCGTCACCTGGAGGAGGCCGTGGGCGTAGTTGGGGGACAGCACCATa > 1:2602866/1‑150 (MQ=255) gCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTaa < 1:635361/150‑1 (MQ=255) cTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACCCTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAat < 2:294250/150‑1 (MQ=255) cTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAATGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAat < 2:2040744/150‑1 (MQ=255) cTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAat < 1:3595724/150‑1 (MQ=255) atatGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGGCC‑GCACCCCCACCCACACCCACACCGAGAGGGTGAAAAAAAACAATTCCGAATACCGGGGAATGCCATGCTATTAGTTGGGGTTCAGCAccgacatgt > 1:1788606/1‑143 (MQ=255) aCAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGa < 2:121241/150‑1 (MQ=255) aGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TAACCCCGACCCTCTCCCACAGGGCGAGGGAGAAAACACTCAAGGCCATCACCAGGAGAAGGCCGGTCTAATAGTTGACGTACAGCACCATAAAGATGTGaaa > 2:4015301/1‑148 (MQ=255) tatGAAACGTATTGCTGTTGCGGGTTTAGTGCGCGCTGATGCCC‑TCACCCCGACACTCTCCCACAGGGAGAGGGTGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATcc < 2:2888076/150‑1 (MQ=255) aaaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑ACACCCCCACCCACAACCACAGGGAGAGGGAGAAAAAACACAAGGCCATCTCCAGGAGAAGGCCGTGCTAATATTTTCGGTACAGCACCATAAAGATTTGATATACCAAc > 2:179454/1‑150 (MQ=255) aaaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGAGGCCC‑TCACCCCCACCCACTCCCACACGGAGTGGGAGAAAACACTCAAGGCCTTCTCCGGGCGAAGGCCGTGCGATTAGTTGCCGTGCAGCACCATAATGAGGTGATAACCgccc > 2:2351662/1‑147 (MQ=255) cGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTgg < 1:880512/150‑1 (MQ=255) tATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgt < 1:2884173/150‑1 (MQ=255) ttGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑GCACCCCCACCCACACCCACAGGGAGAGGGAGAAAAAACACAAGGCCTTAACCGGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATACGAACTGGgtgt > 2:2716392/1‑150 (MQ=38) tGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCgg < 2:1060450/150‑1 (MQ=255) ttAAGTGCGCGCTGATGCCC‑ACACCCCCACCCAAACCCACAGGGAGATGGAGAAAAAAAAAAAGGCCGTAAACATGAGAAGGCCTTTCTATTAGTTTCGGTACAGCACCTTAAATAATTGATATACGAACTGGGTGTGCAGCGGGCCGGt > 2:2976304/1‑150 (MQ=255) gcgcgcTGAGGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTc < 1:2933358/150‑1 (MQ=255) tGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTAc < 2:1677645/150‑1 (MQ=255) gATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTAcc < 1:2075058/150‑1 (MQ=255) gCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGACAACACTCCAGGCCTTCTCCTGGAGAAGGCCTAGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGa < 2:1073041/150‑1 (MQ=255) cc‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACGCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTCCAGCACCTTAAGGATGGGATATCCGACCTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACa > 2:2755239/1‑150 (MQ=39) c‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACaa > 2:3627221/1‑150 (MQ=255) aCCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCTGGCCGGTCGGCTCCAGTACCGGACAagag > 2:397772/1‑150 (MQ=255) cccGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGaa > 2:2674791/1‑150 (MQ=255) ctcccTCTCCCTGTGGGAGAGGGGGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAAc > 1:1323904/3‑150 (MQ=255) ctcccTCTCCCTGTGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAAc > 1:2400776/3‑150 (MQ=255) cccTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCa < 2:1468139/150‑1 (MQ=255) ccTCTCCCTGTGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCAc > 1:4182373/1‑150 (MQ=255) ccTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCAc > 1:2676911/1‑150 (MQ=255) tcCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGATGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTa > 2:1541178/1‑150 (MQ=255) cccACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTAt < 2:1078870/150‑1 (MQ=255) ccACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATc > 2:1095254/1‑150 (MQ=255) ccACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATc > 2:1914651/1‑150 (MQ=255) ccACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATc > 2:1834004/1‑150 (MQ=255) cacaGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCg > 1:3683976/1‑150 (MQ=255) acaGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGa > 1:3025786/1‑150 (MQ=255) | ACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCC‑TCACCCCGACCCTCTCCCACAGGGAGAGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGA > NC_000913/3959333‑3959629 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |