| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 380,005 | A→C | 7.1% | intergenic (‑124/+64) | frmR ← / ← yaiO | regulator protein that represses frmRAB operon/outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 380,005 | 0 | A | C | 7.1% | 449.5 / 2.0 | 154 | intergenic (‑124/+64) | frmR/yaiO | regulator protein that represses frmRAB operon/outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (119/19); new base C (2/13); total (122/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.16e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 164 total aligned reads displayed.
TTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCCGT > NC_000913/379856‑380152 | ttcttcTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACaaa < 2:1361416/150‑1 (MQ=255) tcttctcttcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAag < 2:3710513/150‑1 (MQ=255) tcttctcttcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAag < 1:225405/150‑1 (MQ=255) tcttctcttcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAag < 2:3067168/150‑1 (MQ=255) ctcttcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGa < 1:4249068/150‑1 (MQ=255) cttcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGaa‑a < 2:1061804/150‑1 (MQ=255) ttcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTCTTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGCA‑A‑‑g > 2:3384721/1‑150 (MQ=255) tcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑gg < 2:160798/150‑1 (MQ=255) cGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑gggg > 1:4430757/1‑150 (MQ=255) tgTACGGGGAATTTCGCACCTCATCATCTGCATGCAATATACTATCGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGTAAAACAAAGAGGAA‑A‑‑ggggggg < 1:2896567/149‑1 (MQ=255) tcTGGGCATTTCGCACCTCATCATATGAATGCAATTTACTATTGGGGGGTTTTCTATATTTCAATGAATACCCGCCTATAGTATATAACACTTTAGAATAAATTTTTTCCGTTGAATGTGGTCGTAAAACAAAGAGGAA‑A‑‑gggggggggg < 2:4578666/149‑1 (MQ=255) tGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCt > 1:3436351/1‑150 (MQ=255) tGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAAAAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCt > 2:2154707/1‑150 (MQ=255) gggCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATAAAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTa > 1:2513815/1‑150 (MQ=255) ttCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGc > 1:4053251/1‑150 (MQ=255) tCGCACCTTATCAGCTGCATGCAATTTACTATTGGGGGGTATTCTATATGTCAATGCATACCCCCCTTTAGTATATAACACTGGTGATTAAAATTTCTCCGGTGACTGTGGTCGGAAACCACCGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCa < 2:1417409/150‑1 (MQ=255) tCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGGGGGGGCTAATCGGc > 2:2691705/1‑150 (MQ=255) cACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAggg > 2:2567588/1‑150 (MQ=255) aCCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGa > 2:1467587/1‑150 (MQ=255) aCCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGa > 2:4461890/1‑150 (MQ=255) aCCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGa > 2:410793/1‑150 (MQ=255) tcatcTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGgccg > 1:1883310/1‑150 (MQ=255) tcatcTGCATGCAATATACTATAGGGGGGTAGTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGCATGTGGTCGGACAACAAAGAGGAC‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGgccg > 2:3845974/1‑150 (MQ=255) catcTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGgccgc > 2:4053593/1‑150 (MQ=255) tcTGCATTCAATATACTCTAGGGGGTTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGTATAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGCGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGccc < 2:4300304/150‑1 (MQ=255) tcTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGCGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGccc > 2:2225715/1‑150 (MQ=255) ttcatgcaATATACTCTAGGGGGGTATTCTATATGTCCAGGCAAACCCCCCTATAGTATATACCACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAACGCGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCg < 2:1426784/148‑1 (MQ=255) ttcatgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCg > 2:2028221/3‑150 (MQ=255) ttcatgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCg > 2:842473/3‑150 (MQ=255) ttcatgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCGACGCGGCAGGGAAGGCCGCCCCg > 2:3890769/3‑150 (MQ=255) ggcatccaATATACTTTAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATACCACTGGAGAATAAAATTTATCCTGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCg < 2:4628287/149‑1 (MQ=255) gcatgcaATATCCTAGAGGGGGGTATTCAATATGTCAATGCATACCCCCCTATAGTATATAACACTGCAGAATAAAATCTAACCGGGGAATGGGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCgg < 2:194841/150‑1 (MQ=255) catgcaATATACTATCGGGGGCTATTCTATATGTCAATGCATACCCCCCTATAGTAAACACCACTGGAGAATAAAATTTAGCCGGTGAATGTGGTCGGAAAACACAGAGGAA‑A‑‑GGGGGGGGGGCTACTCGGCAGGGAAGGCCGCCCCGGa < 2:2371567/150‑1 (MQ=255) catgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCCGGGAAGGCCGCCCCGGa > 1:703893/1‑150 (MQ=255) catgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGa > 1:574225/1‑150 (MQ=255) catgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGa > 1:703859/1‑150 (MQ=255) atgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATa > 1:363783/1‑150 (MQ=255) tgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAC‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATa > 1:2787595/1‑150 (MQ=255) tgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATa > 1:723909/1‑150 (MQ=255) aaTATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcg > 1:405963/1‑150 (MQ=255) aaTATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCACTATAGTATATAACAATGGAGAATAAAATTTATAATGTGAATTTGGTCGGAAAACAAAGAGGAA‑A‑‑GGTGTGGGGGCTAATCGTCAGGGAAGGACGCCACGGATAgcg > 2:1339588/1‑150 (MQ=255) tcccctaGGGGGGTACTCTCTAGGACCATGCATACCCCCCTATACTAAATAACCCCGGAGACTAACATCTATCCGGCGCACGTGGCCGGAAAAACCCGAGGCA‑C‑‑GGGGGGGGGGCTCATCGGCAGGGAAGGCCGCCCCGGATAgcgggcg < 2:539685/145‑1 (MQ=255) tataGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAGAGGGGAA‑G‑‑GGGGGGGGGGCTCATCGGCCGGGAAGGCCGCCCCGGATAGCGggcggcc > 2:4312605/1‑149 (MQ=255) tataGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCa > 1:2640005/1‑150 (MQ=255) tataGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCa > 2:2896649/1‑150 (MQ=255) ataGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGa < 2:272663/150‑1 (MQ=255) ggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGGAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAAt > 2:934119/1‑150 (MQ=255) ggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAAt > 2:1586598/1‑150 (MQ=255) ggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAAt > 1:3877328/1‑150 (MQ=255) ggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGAGGGCGGCAGAAGGAAt > 1:4113067/1‑150 (MQ=255) tatactatacGCCAATGCACACCCCCCTATCGCATATACCACGGGAGAATAAACCCCCCCCGGTGAAGGGGGCCGGACACCACCGCCCAC‑C‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCa < 2:2014266/150‑1 (MQ=255) tCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGACTCAGaa > 1:935701/1‑150 (MQ=255) cTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAt > 1:2099971/1‑150 (MQ=255) cTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAt > 1:1448312/1‑150 (MQ=255) cTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAt > 2:3462406/1‑150 (MQ=255) cTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAt > 1:2100070/1‑150 (MQ=255) tataTGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAC‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAtt > 2:2039730/1‑150 (MQ=255) tataTGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑AG‑GGGGGGGGGGCTAAGCGGCCGGGAAGGCCGCCCCGGGAAGCGGGCGGAAGAAGGAAGAAGAAt > 2:830618/1‑150 (MQ=255) tataTGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAtt > 2:2445340/1‑150 (MQ=255) tataTGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAACGAATCAGAAtt > 1:2582528/1‑150 (MQ=255) tatGTCAATGCATACACCCCTATATTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTc > 2:3243322/1‑150 (MQ=255) gTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAg > 1:1882443/1‑150 (MQ=255) tCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAgg > 2:4173164/1‑150 (MQ=255) tCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAgg > 2:3251625/1‑150 (MQ=255) aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTTAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTc > 2:118476/1‑150 (MQ=255) aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTc > 1:503771/1‑150 (MQ=255) aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTc > 1:1352804/1‑150 (MQ=255) aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTc > 2:730221/1‑150 (MQ=255) aTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCa > 1:70825/1‑150 (MQ=255) cATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGAc > 2:1984239/1‑150 (MQ=255) cATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGAc > 2:4001838/1‑150 (MQ=255) ccccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGc > 2:4101042/1‑150 (MQ=255) ccccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGCCTAATCGGCAGGGAAGGCCGCCCCGGAAAGCGGGCGGCTGAAGGAATCAGAATTTCCAGGACAGACGGGc > 2:1223543/1‑150 (MQ=255) cccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGACGGAATCAGAATTTCCAGGTCAGACGGGCt > 1:3690090/1‑150 (MQ=255) cccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCt > 1:1848803/1‑150 (MQ=255) cccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCt > 2:751703/1‑150 (MQ=255) cccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCt > 1:474831/1‑150 (MQ=255) taGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGACTCAGAATTTCCAGGTCAGACGGGCTGCAAGTTg > 1:886016/1‑150 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGa > 1:1040325/1‑150 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGa > 1:1040324/1‑150 (MQ=255) aaCACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCg > 1:4295726/1‑150 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGACTCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTaaa > 2:3909273/1‑150 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTaaa > 2:2698618/1‑150 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTaaa > 1:1361297/1‑150 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTACCCGGTCAGACGGGCTGCAAGTTGCAGCCCGGTaaa > 2:1720445/1‑150 (MQ=255) ggAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAACG‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTGaaa > 2:3174002/1‑150 (MQ=255) ggAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCCGGTCAGACGGGCTGCAAGTTGCAGACCGTTaaaa > 1:2238987/1‑150 (MQ=255) ggAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTACAGGTCAGACGGGCTGCAAGTTGCAGACCGTTaaaa > 1:3351056/1‑150 (MQ=255) tAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCg > 1:1637102/1‑150 (MQ=255) aaaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGt > 1:2431500/1‑150 (MQ=255) aTCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgt > 2:1508351/1‑150 (MQ=255) aTCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgt > 2:2896372/1‑150 (MQ=255) aTCCGGTGAATGGGGTCGGAAAACAACGAGGAC‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCACAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgt > 2:1508371/1‑150 (MQ=255) ggTGAATGTGGTCGGAAAACAAAGAGGAA‑AGGGGGGGGGGGGCTAAACGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCCGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgtgt > 2:2266562/1‑150 (MQ=255) ggTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCg > 1:1482573/1‑150 (MQ=255) gTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGt > 1:2988617/1‑150 (MQ=255) cgAATGTGGTCGCAAAACCACGCCGAA‑C‑‑GGGGGGGGGGCTACTCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTa < 2:3701508/149‑1 (MQ=255) acctgGTCGGAAACCAACGCGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACca < 2:631648/147‑1 (MQ=255) tgGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCacac > 1:2002724/1‑150 (MQ=255) ggAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAACACACTTTAc > 2:4190772/1‑150 (MQ=255) | TTCTTCTCTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑A‑‑GGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCCGT > NC_000913/379856‑380152 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |