| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,429,019 | G→T | 5.7% | intergenic (+35/‑30) | lomR → / → stfR | pseudogene, Rac prophage lom homolog;Phage or Prophage Related; interrupted by IS5 and N‑ter deletion/Rac prophage; putative tail fiber protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,429,019 | 0 | G | T | 5.7% | 331.6 / 6.5 | 113 | intergenic (+35/‑30) | lomR/stfR | pseudogene, Rac prophage lom homolog;Phage or Prophage Related; interrupted by IS5 and N‑ter deletion/Rac prophage; putative tail fiber protein |
| Reads supporting (aligned to +/- strand): ref base G (55/51); new base T (2/5); total (57/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.71e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.49e-01 | |||||||||||
Only 100 of 121 total aligned reads displayed.
GGCGTGCAGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGGTGGTGGTGAACACGCTGGCCTC > NC_000913/1428871‑1429167 | cAGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGGAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAgg > 1:1008967/1‑150 (MQ=255) aGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGGGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGc < 1:1837858/150‑1 (MQ=255) ttAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCggg > 2:963726/1‑150 (MQ=255) ttAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCggg < 2:1509311/150‑1 (MQ=255) ttAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCggg > 2:957204/1‑150 (MQ=255) tAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCTGAACCGGCGGGc < 1:1032166/150‑1 (MQ=255) aCCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCTGAACCGGCGGGC‑tg < 1:1229548/150‑2 (MQ=255) aCCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑tt > 1:1657042/1‑150 (MQ=255) ccgaccgaATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑tttt > 2:492809/1‑150 (MQ=255) gaccgaATCCGGGGACATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑tttttt < 2:1397722/150‑1 (MQ=255) caccgaATCCGTGGCCATTGCTATTGCTCATGTAGCCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGGCGGTTATAAGATCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCTGAACCGGCGGGC‑tgtcat < 2:164482/149‑6 (MQ=255) accgaCTCCGGGGCCATTGATATTGCTTATGAAGGCCCCGGCAGGGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGGTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTtg < 2:790980/150‑1 (MQ=255) gaATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTTATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTgg < 2:1444513/150‑1 (MQ=255) aaaccGTGGCCATTGATATTGCTTCTGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGGTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGGTCAGGCGGGC‑TTTTTTGTggg < 2:912277/147‑1 (MQ=255) aaTCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTggg < 2:787218/150‑1 (MQ=255) ggCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAata < 1:502867/150‑1 (MQ=255) ttGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGAGGGGTGAATATGGCa < 1:1357632/150‑1 (MQ=255) tGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAg < 1:1239879/150‑1 (MQ=255) tGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAg < 1:1331181/150‑1 (MQ=255) gATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGt > 2:280130/1‑150 (MQ=255) ttGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATTGCAGTAAAg > 2:468265/1‑150 (MQ=255) cTTATGAAGGCCCCGGCAGTGGTGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGAtt > 1:1759839/1‑150 (MQ=255) cTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGAtt > 2:513789/1‑150 (MQ=255) cTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGAtt > 1:194664/1‑150 (MQ=255) aTGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCa > 1:1852679/1‑150 (MQ=255) taaGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAgg < 2:432168/149‑1 (MQ=255) aGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGgtg < 2:1016951/150‑1 (MQ=255) aGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGgtg > 1:1813394/1‑150 (MQ=255) ccccGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAgtacacc < 1:1492679/150‑7 (MQ=255) ccccGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTAc > 1:164826/1‑150 (MQ=255) ccccGGCAGTGGCGACTGGCGCACTGACGGGTTCATCGTGGGTGTCGGTTATAAGATCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTAc < 1:1470262/150‑1 (MQ=255) cccGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACt < 2:1364628/150‑1 (MQ=255) cccGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACt > 1:968778/1‑150 (MQ=255) cccGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACt < 2:1246028/150‑1 (MQ=255) ccGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTg < 2:676790/150‑1 (MQ=255) ggCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGaa < 2:866713/150‑1 (MQ=255) cAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAg < 1:1729716/150‑1 (MQ=255) cGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGca < 1:115820/150‑1 (MQ=255) gACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGAGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGcac < 1:1307244/150‑1 (MQ=255) aCTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAAcc < 1:455667/150‑1 (MQ=255) ggACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCgg < 1:890254/149‑1 (MQ=255) gACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGt < 2:1297346/150‑1 (MQ=255) gACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGt < 2:1609632/150‑1 (MQ=255) cGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTAc > 2:954835/1‑150 (MQ=255) cGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGAATAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTa < 2:812401/150‑1 (MQ=255) cctCGTGGGTGGCGGTTATAAGTTCTGAGTTGCCAGGTACCACAGTGGTATGACCGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGATAACCGGTACAGAACt < 2:394202/148‑1 (MQ=255) tCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGc < 1:1314153/150‑1 (MQ=255) tGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGcaca > 1:1531740/1‑150 (MQ=255) gtgtCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATc > 2:281809/1‑150 (MQ=255) tgtCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATcc > 2:19206/1‑150 (MQ=255) ggtCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGTGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATcc < 2:510894/149‑1 (MQ=255) ggtCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATcc < 1:654932/149‑1 (MQ=255) cGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGc < 2:1852679/150‑1 (MQ=255) gTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTg < 2:1366693/150‑1 (MQ=255) gTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTg > 1:187769/1‑150 (MQ=255) gTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTg > 1:1618621/1‑150 (MQ=255) gTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTg < 2:1792103/150‑1 (MQ=255) aaGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGc > 1:874338/1‑150 (MQ=255) aGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCa > 1:611791/1‑150 (MQ=255) gTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCaa > 1:821857/1‑150 (MQ=255) gTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCaa > 1:1503158/1‑150 (MQ=255) tCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCTCAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCaaaa > 2:739101/1‑150 (MQ=255) gATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGt > 1:1727181/1‑150 (MQ=255) aTTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAACCCGGTACAGACCTGCACAATCCAGCTGAAAGCAAAACGTa > 1:585848/1‑150 (MQ=255) aTTAGCCAGGTAACACAGTGATATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTa < 1:877768/150‑1 (MQ=255) tAGCCTGTTAACACAGTGTTATGACAGCCCGCAGGTTCAGGCGGGC‑TTTTTTGTGGGGTTAATATGTCAGTAAAGATTTCAGTTGTACTGAAAGAATGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAATCAAAACGTAAc < 1:301639/150‑1 (MQ=255) tAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAAc < 2:1657042/150‑1 (MQ=255) tAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAAc < 1:1064725/150‑1 (MQ=255) aGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACa < 1:1581192/150‑1 (MQ=255) aGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACa > 1:74738/1‑150 (MQ=255) gCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAg > 1:1525528/1‑150 (MQ=255) ccAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGc < 2:1503158/150‑1 (MQ=255) ggTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGcacc > 2:366148/1‑150 (MQ=255) aaCACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACg > 2:975692/1‑150 (MQ=255) aaCACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACg > 2:118614/1‑150 (MQ=255) acacAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGATTATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACgg > 1:315535/1‑150 (MQ=255) acacAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACgg < 1:1726650/150‑1 (MQ=255) cacaGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACggt > 2:167360/1‑150 (MQ=255) acaGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACggtg > 1:67428/1‑150 (MQ=255) caGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGACCTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACggtgg > 1:1158879/1‑150 (MQ=255) caGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACggtgg < 2:1024647/150‑1 (MQ=255) aGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACggtggt > 2:1532637/1‑150 (MQ=255) aGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACggtggt > 1:1106542/1‑150 (MQ=255) gtgtTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACggtggtg > 1:881633/1‑150 (MQ=255) gtTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATCCAGCTGAAAGCAAAACGTAACAGCACCACggtggtggt > 1:1409242/1‑150 (MQ=255) ttATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGgtggtggtg < 2:1379877/150‑1 (MQ=255) ttATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGgtggtggtg < 1:534127/150‑1 (MQ=255) tATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGGTGGTGGTGa > 1:1025356/1‑150 (MQ=255) tATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTCAATATGGCAGAAACGATTTCAGGTGTACTGAAAGACGGCACAGGAAACCCGGTACAGAACTCCACAATCCCGCTGAAAGCAAAACGTAACAGCACCACGGTGGTGGTGa < 2:1325467/150‑1 (MQ=255) caaaaaaGCCCGCCTGCACCGGCGGGC‑TATTTTGTGGGGTGAATATGGCAGTAAAGCTTTCAGGTGTACTGAAAGACGGCCCAGGACAACCGGGACAGAACTGTACAAGCCAGCTGAAAGCACAACGTCGCAGCACCACGgtgggggtgg > 1:86674/7‑149 (MQ=255) tGACAGCCCGCCTGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGGTGGTGGTGAac < 1:393763/150‑1 (MQ=255) aaaGCCCGCCTGAACCGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGGTGGTGGTGAacac > 1:1761169/3‑150 (MQ=255) aCAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAACCCGGTACAGAACTGCACAATCCCGCTGAAAGCAAAACGTAACAGCACCACGGTGGTGGTGAaccc > 1:1250134/1‑148 (MQ=255) gCCCGCCGGTTCAGGCGGGC‑TTTTTTGTTGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTTAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAATCGTAACAGCACCACGGTGGTGGTGAACACGCt > 2:1128078/1‑150 (MQ=255) cccGCCGGTTCAGGCGGGC‑TTATTAGTGGGGTGAATATGGCAGTAAAGAAATCAGGAGTACTGAAAGACTGCCCAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACCTAACAGCACCACGGTGGTGGTTCACACGcag > 1:938852/1‑148 (MQ=255) cgccgGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGGTGGTGGTGAACACGCTGGc > 1:529484/1‑150 (MQ=255) gccgGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGGTGGTGGTGAACACGCTGGcc < 1:724862/150‑1 (MQ=255) gccgGTTCAGGCGGGC‑TTTTTTGTGGGGGGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGGTGGTAGTGAACACGCTGGcc < 2:1230272/150‑1 (MQ=255) ccgGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCTCGGTGGTGGTGAACACGCTGGCCt > 2:228221/1‑150 (MQ=255) cgGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGGTGGTGGTGAACACGCTGGCCTc < 2:621761/150‑1 (MQ=255) | GGCGTGCAGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGC‑TTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGGTGGTGGTGAACACGCTGGCCTC > NC_000913/1428871‑1429167 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |