| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_bme_pgi | = 2099817 | 136 (1.510) | 9 (0.100) | 8/284 | 8.5 | 6.6% | intergenic (‑204/+45) | ugd/gnd | UDP‑glucose 6‑dehydrogenase/6‑phosphogluconate dehydrogenase, decarboxylating |
| ? | NC_000913_3_bme_pgi | = 2099828 | 123 (1.430) | intergenic (‑215/+34) | ugd/gnd | UDP‑glucose 6‑dehydrogenase/6‑phosphogluconate dehydrogenase, decarboxylating | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGC‑AAAAAAAAGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_bme_pgi/2099665‑2099817‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggCGTATATTGCACCGGGCTTTTTTTTGCCAAATATCTTATAGACTAAATTTCACTGCTTAATATTAACTTAATAAATATCAGCTATTCTTATAAAGAAAATCTGAATTGTTTTTCGTTGCGTTGACCATCGAACAACGTAGCGTTAAAA < NC_000913_3_bme_pgi/2099828‑2099681 TGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGC‑AAAAAAAAGC > 2:673614/1‑149 GATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGC‑AAAAAAAAGCC > 1:484012/1‑149 TAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGC‑TAAAAAAAGCCCG < 1:815351/149‑1 AAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGC‑AAAAAAAAGCCCGG > 2:1067455/1‑149 TAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGC‑AAAAAAAAGCCCGGCGTATATTGCACCGG < 1:594891/149‑1 AACGCTACGTTGTTCGATTGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGC‑AAAAAAAAGCCCGGCGTATATTGCACCGGG < 1:328116/149‑1 ACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGCAAAAAAAAAGCCCGGCGTATATTGCACCGGG < 2:1358139/149‑1 GCTACGTTGTTCGATGGTCAACCCAACGAAAAACAAATCAGAATTTCCTTATAAGAATAGCTGATAATTATTAAGTTAATAATAAGCAGTGAAATTTAGTCTATAAGATATTTGGC‑AAAAAAAAGCCCGGCGTATATTGCACCGGGCTT < 2:1111364/149‑1 TTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGC‑AAAAAAAAGCCCGGCGTATATTGCACCGGGCTTTTTTTT < 2:900636/149‑1 TGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGC‑AAAAAAAAGCCCGGCGTATATTGCACCGGGCTTTTTTTTGCCAAATA < 2:1404759/149‑1 cAAAACCATTCCTATTATCTTTATAAGAATAGCTGATATTTATAAAGTTAATATTAAGCAGTGAAATATACGCAATAAGATATTTGGC‑AAAAAAAAGCCCGGCCTATATTGCACCGGGCTTTTTTTTGCCAAATATCTTATAGACTAAA < 2:285002/148‑1 CAAATCAGATTTTCATTATAAGAAAAGCTGAAATTTATTAACTTAATATTAAGCAGTGAACATAAGTCTAAAAGATATATCGC‑AAAAAAAAGCCCCGCGTATATTGCACCGGGCTTTTTTTTGCCAAATATCTTATAGACTAAATTTCA < 1:177538/149‑1 TTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGC‑AAAAAAAACCCCGGCGTATATTGCACCGGGCTTTTTTTTGCCAAATATCTTATAGACTAAATTTCACTGCTTAATATTAACTTAATAAATATCAGCTATTCTTATAAA < 2:228826/149‑1 GCCCGGCGTATATTGCACCGGGCTTTTTTTTGCCAAATATCTTATAGACTAAATTTCACTGCTTAATATTAACTTAATAAATATCAGCTATTCTTATAAAGAAAATCTGAATTGTTTTTCGTTGCGTTGACCATCGAACAACGTAGCGT > 1:196762/1‑149 CCCGGCGTATATTGCACCGGGCTTTTTTTTGCCAAATATCTTATAGACTAAATTTCACTGCTTAATATTAACTTAATAAATATCAGCTATTCTTATAAAGAAAATCTGAATTGTTTTTCGTTGCGTTGACCATCGAACAACGTAGCGTT < 2:683426/149‑1 CCGACGTATATTGCACCGGGC‑TTTTTTTGCCAAATATCTTATAGACTAAATTTCACTGCTTAATATTAACTTAATAAATATCAGCTATTCTTATAAAGAAAATCTGAATTGTTTTTCGTTGCGTTGACCATCGAACAACGTAGCGTTAA > 2:355800/1‑149 CGGCGTATATTGCACCGGGCTTTTTTTTGCCAAATATCTTATAGACTAAATTTCACTGCTTAATATTAACTTAATAAATATCAGCTATTCTTATAAAGAAAATCTGAATTTTTTTTCGTTGCTTTTACCATCGAACAACGTAGAGTTAA > 2:1051043/1‑149 GGCGTATATTGCACCGGGCTTTTTTTTGCAAAATATCTTATAGACTAAATTTCACTGCTTAATATTAACTTAATAAATATCATCTATTCTTATAAAGAAAATCTGAATTGTTTTTCGTTGCGTTGACCATCGAACAACGTAGCGTTAAA < 1:820732/149‑1 GCGTATATTGCACCGGGCTTTTTTTTGCCAAATATCTTATAGACTAAATTTCACTGCTTAATATTAACTTAATAAATATCAGCTATTCTTATAAAGAAAATCTGAATTGTTTTTCGTTGCGTTGACCATCGAACAACGTAGCGTTAAAA > 2:444430/1‑149 GCGTATATTGCACCGGGCTTTTTTTTGCCAAATATCTTATAGACTAAATTTCACTGCTTAATATTAACTTAATAAATATCAGCTATTCTTATAAAGAAAATCTGAATTGTTTTTCGTTGCGTTGACCATCGAACAACGTAGCGTTAAAA < 1:120947/149‑1 TGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGC‑AAAAAAAAGCCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_bme_pgi/2099665‑2099817‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggCGTATATTGCACCGGGCTTTTTTTTGCCAAATATCTTATAGACTAAATTTCACTGCTTAATATTAACTTAATAAATATCAGCTATTCTTATAAAGAAAATCTGAATTGTTTTTCGTTGCGTTGACCATCGAACAACGTAGCGTTAAAA < NC_000913_3_bme_pgi/2099828‑2099681 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |