Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913_3_hsa_pgi 3,815,824 G→T intergenic (‑56/+10) pyrE ← / ← rph orotate phosphoribosyltransferase/ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913_3_hsa_pgi3,815,8240GT98.7% 233.8 / ‑4.5 76intergenic (‑56/+10)pyrE/rphorotate phosphoribosyltransferase/ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base T (33/42);  total (34/42)
Fisher's exact test for biased strand distribution p-value = 4.47e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.93e-01

TGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGT  >  NC_000913_3_hsa_pgi/3815681‑3815969
                                                                                                                                                |                                                                                                                                                 
tGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTa                                                                                                                                              <  2:293657/149‑1 (MQ=255)
tGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATGCAATAACCTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTa                                                                                                                                              <  1:952482/149‑1 (MQ=255)
     ccGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAAt                                                                                                                                         >  2:534001/1‑149 (MQ=255)
      aggATTTCAGCGTAAACTCGCCAAACTTTAACACATGCTTGCTAAGCGAAAATTAAATAAACTTTCGCTGATATTGTTTCATGACTTCGCTCCTCATATTACTTTTCAAAAGAC‑AAAAAAAAGGCGACTCATCATTCTCCTTAAAAATc                                                                                                                                        <  2:708963/148‑1 (MQ=255)
           ttCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAAACAGttt                                                                                                                                   >  1:564333/1‑149 (MQ=255)
             cAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGc                                                                                                                                 <  1:769098/149‑1 (MQ=255)
             cAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCAAGCCTTAGCTCATCATCTTACTTTTCTACATAC‑AAAAAAAAGGCGACTCATCAGTCTCCGTAAAAATCAGTTTGc                                                                                                                                 >  1:665921/1‑149 (MQ=255)
              aGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCGCATCTTACTTTTCTACAGAC‑AAAAAAAAGGAGACTCATCAGTCTCAGTAAAAATCAGTTTGcc                                                                                                                                >  1:599889/1‑149 (MQ=255)
                    aaCTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAAATCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGcgcc                                                                                                                          <  2:249473/149‑1 (MQ=255)
                           cAAACTTTAACACCTGCTTGCTAAGCGCAAATTAAATAAACTGTCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCt                                                                                                                   <  1:529375/149‑1 (MQ=255)
                            aaaCTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTg                                                                                                                  <  1:247850/149‑1 (MQ=255)
                              aCTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCg                                                                                                                <  1:262536/149‑1 (MQ=255)
                                 ttAACTCCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCg                                                                                                             <  2:557133/149‑1 (MQ=255)
                                 ttAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAACGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCg                                                                                                             <  1:484381/149‑1 (MQ=255)
                                  tAACACATGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATTTGGTTTAATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGc                                                                                                            <  2:1197542/149‑1 (MQ=255)
                                    ccacCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAACAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTa                                                                                                          >  2:246633/2‑149 (MQ=255)
                                    acacCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTa                                                                                                          <  1:628025/149‑1 (MQ=255)
                                      acCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCGTTAAAAATCAGTTTGCCAGCGCCGCCTACTGCGTCGCTaaa                                                                                                        >  2:98868/1‑147 (MQ=255)
                                          gcttgctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATgg                                                                                                    >  1:386732/1‑149 (MQ=255)
                                              tctAAGCGCAAATTCAATAAACTGGCGCTGATATGGGTTCATGCCTTCGGTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgattc                                                                                                <  1:327446/148‑1 (MQ=255)
                                              gctAAGCGCAAATTCAATAAACTGTCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgattc                                                                                                <  1:534001/149‑1 (MQ=255)
                                              gctAAGCGCAAATTCAATAAACTGGCGCTGTTATGTTTTCTTGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgattc                                                                                                <  2:329922/149‑1 (MQ=255)
                                              gctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCAACAGAC‑AAAAAAAAGGCGACTCAGCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgattc                                                                                                <  1:815800/149‑1 (MQ=255)
                                               ctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgattcg                                                                                               >  2:986730/1‑149 (MQ=255)
                                               ctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgattcg                                                                                               >  1:1090704/1‑149 (MQ=255)
                                               ctAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgattcg                                                                                               >  1:956615/1‑149 (MQ=255)
                                                tAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGACAAAAAAAAAGGCGACTCATCAGGCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgattcc                                                                                               >  1:1040584/1‑148 (MQ=255)
                                                tAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCGTTCTGCGTCGCTACAATGgattcgc                                                                                              >  2:308098/1‑148 (MQ=255)
                                                tAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCGTCTGCGTCGCTACAAGGgattcgc                                                                                              >  2:83300/1‑148 (MQ=255)
                                                   gcgcAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgattcgattc                                                                                           <  1:1101499/149‑1 (MQ=255)
                                                         aTTCAATAAACTGGCGCTGATATGGTTTCATGACTTCGCTCCTCATCTTAATTTTCTACAGAC‑TAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCTTCGCTACAATGGATTCGATTCCCCTCg                                                                                     <  1:252158/149‑1 (MQ=255)
                                                           tCAATAAACTGGCGGTGTTATGGTTTCATGCCTTCGCGCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCggg                                                                                   <  2:599889/149‑1 (MQ=255)
                                                            cAATAAACTGGCGCTTATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGc                                                                                  <  1:1148726/149‑1 (MQ=255)
                                                               tAAACTTGCGCTGATATGGTTTCATGACTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCAGCAGTCTCCTTAAAAATCAGTTTTCCAGCGCCGCCTTCTGCGTCGCTCCAATGGAGACGATTGCCCGCGGGcccg                                                                               >  1:64602/1‑147 (MQ=255)
                                                               tAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCAACAATGGATTCGATTCCCCTCGGGCCag                                                                               <  2:878704/149‑1 (MQ=255)
                                                                aaaCTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAACAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCaga                                                                              <  2:665921/149‑1 (MQ=255)
                                                                     ggCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCcaa                                                                         <  1:1238096/149‑1 (MQ=255)
                                                                      gcgcTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCcaac                                                                        <  1:481474/149‑1 (MQ=255)
                                                                      gcgaTGATTTTGTTTCATTCCTTCGATCCTCAACTTACTTTTCCACAGAC‑AAAAAATAGTCGACTCAACATTCTCCTTAAAAATCAGTTTTCAAGCGCGGCCTTCTGCGGCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCcaac                                                                        <  1:827391/149‑1 (MQ=255)
                                                                       cgcTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgatt                                                                                                 >  1:1177290/1‑123 (MQ=255)
                                                                       cgcTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGgatt                                                                                                 <  2:1177290/123‑1 (MQ=255)
                                                                       cgcTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCcaaca                                                                       <  1:1023190/149‑1 (MQ=255)
                                                                          tGAAATGGTTTCAGGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGa                                                                    <  2:299767/149‑1 (MQ=255)
                                                                           gATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGAt                                                                   <  2:117357/149‑1 (MQ=255)
                                                                             tatGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGa                                                                 <  2:366418/149‑1 (MQ=255)
                                                                              atGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTGATCAGTCTCCTTAAAAATCAGTTTGCCTGCGCCGAGTTCTGCGTCGCTACAATGGTTTCGCTTGCCCTCGGGCCAGAGCCAACAAGATGAg                                                                >  1:714673/1‑149 (MQ=255)
                                                                                         ccTTCGCTCCTCATCTTACTATTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGCGCCAACAAGATGAGTAGCTCTTCAt                                                     >  1:455964/1‑149 (MQ=255)
                                                                                           ttCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCGTTCTGCGTCGCTACAATGGATTCGATTCCCATCGGGCCAGAGCCAACAAGATGATTAGCTCTTAAttg                                                   >  2:673937/1‑147 (MQ=255)
                                                                                            tCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATggg                                                  <  1:986730/149‑1 (MQ=255)
                                                                                             cGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAACAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGt                                                 <  1:673937/149‑1 (MQ=255)
                                                                                              gCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTg                                                >  1:134086/1‑149 (MQ=255)
                                                                                                tcctcATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGACTCCTTAAAAATCAGTTTGCCAGCGCCTCCTTCTGCGTCGCTACAATGGATTCTATTCCCCTAGGGCCAGAGCCAACAAGATGAGTAGCTCTACATGGGTGaa                                              >  1:313954/1‑149 (MQ=255)
                                                                                                  ctcATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGAAGCTCTTAATGGGTGAAcc                                            >  1:281106/1‑148 (MQ=255)
                                                                                                    cATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCACCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGc                                          >  1:923160/1‑149 (MQ=255)
                                                                                                    cATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCACCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGc                                          >  1:647965/1‑149 (MQ=255)
                                                                                                    cATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCACCGCCGTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGCGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGc                                          >  1:1113474/1‑149 (MQ=255)
                                                                                                     aTCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAt                                                     >  2:999278/1‑137 (MQ=255)
                                                                                                     aTCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCAt                                                     <  1:999278/137‑1 (MQ=255)
                                                                                                     aTCTTACATTTCTACCTAC‑ATATAACAGGCGACTCATCAGTCTCATTAAAACTCAGTGTGGCAGCGCCGCCTTCTGCGACGCTACAATGGATTCGATTCCCCTTGGGACAGAGCCAACAAGATGAGTAGCTCTTCATGGGTTAACGGCt                                         <  2:1187637/149‑1 (MQ=255)
                                                                                                        ttACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTTCAATGGAGTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGc                                      >  2:172914/1‑149 (MQ=255)
                                                                                                        ttACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGc                                      >  1:75905/1‑149 (MQ=255)
                                                                                                            ttttCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTc                                  <  1:221587/149‑1 (MQ=255)
                                                                                                             tttcatcAGAC‑AAAAAAAACGCGAGTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTAGAATGGATTCGATTCCCCTCGGGCCAGAGCCAAGAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCt                                 <  2:493060/143‑1 (MQ=255)
                                                                                                              ttCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAACTCCGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTg                                <  2:707407/149‑1 (MQ=255)
                                                                                                                 tACAGAC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTATGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGATCCAACAAGATGAGTAGCTCGTCATGGGTGACCGGCTCGCCTTCTGCCg                             >  2:1147951/1‑149 (MQ=255)
                                                                                                                      aC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACTGCTCGCCTTCTGCCGTcccg                        >  1:85279/1‑148 (MQ=255)
                                                                                                                      aC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTcccc                        >  1:845439/1‑149 (MQ=255)
                                                                                                                      aC‑AAAAAAAAGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTcccc                        >  1:363487/1‑149 (MQ=255)
                                                                                                                          aaaaaaaGGCGACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGCGCCAACAAGATGAGTAGCTCTGCATGGGTGAACGGCTCGCCTTCTGCCGTGCCCTGc                     >  2:1156257/1‑149 (MQ=255)
                                                                                                                                aGGAGACTGATGAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCa               >  1:1184303/1‑149 (MQ=255)
                                                                                                                                    gACTCATCAGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAatga           >  1:512161/1‑149 (MQ=255)
                                                                                                                                         atcaGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATgcgc      <  2:573563/149‑1 (MQ=255)
                                                                                                                                           caGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATAGATTCGCTTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGATCGGCTCGCCTTCTGCCGTCCCCTGCACTTCACTGATGCGccc    <  2:564333/149‑1 (MQ=255)
                                                                                                                                           caGTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTGCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGccc    <  1:795049/149‑1 (MQ=255)
                                                                                                                                             gTCTCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGt  <  2:1090704/149‑1 (MQ=255)
                                                                                                                                             gTCTCCTTAAAAATCAGTGTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATGCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGt  <  2:956615/149‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                 
TGCGCCCGGATTTCAGCGTAAACTCGCCAAACTTTAACACCTGCTTGCTAAGCGCAAATTCAATAAACTGGCGCTGATATGGTTTCATGCCTTCGCTCCTCATCTTACTTTTCTACAGAC‑AAAAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGT  >  NC_000913_3_hsa_pgi/3815681‑3815969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑