| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_hsa_tpiA | 4,296,042 | 0 | C | T | 31.3% | 88.2 / 58.0 | 84 | intergenic (+266/+376) | gltP/yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| Reads supporting (aligned to +/- strand): ref base C (28/29); new base T (10/16); total (38/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.24e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTC > NC_000913_3_hsa_tpiA/4295894‑4296179 | gccGGATAAGGCGTATACGCCGCATCCGACATCACCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAAc < 1:496498/147‑1 (MQ=255)gTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTCAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACCACAAc > 2:799426/1‑149 (MQ=12) tCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACg > 2:326258/1‑149 (MQ=32) cGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGc < 1:269562/149‑1 (MQ=17) ggATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGcc < 1:326258/149‑1 (MQ=32) gATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCt < 1:414600/149‑1 (MQ=32) ggCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGCCTGATGc > 1:467267/1‑149 (MQ=17) ggCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGc > 2:563493/1‑149 (MQ=32) gCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGCCTGATGCg > 2:807518/1‑149 (MQ=17) ggTTTACGCCGCTTGCGAAATCAACGCCGGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGa < 2:3058/148‑1 (MQ=11) gTTTATGCCGGATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGAc < 2:757260/149‑1 (MQ=17) gTTTATGCCGCATCCGACATCAACGCCTGCTGGGACACTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGAc > 1:628811/1‑149 (MQ=12) gTTTACGGCCCATACGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGCCTGATGCGAc < 2:544230/149‑1 (MQ=11) aTGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGCCTGATGCGACGCtt > 1:401725/1‑149 (MQ=17) ccGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACCTCAACGCCTGATGCGACCCTTGcc > 2:516166/1‑149 (MQ=21) ccGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGcc > 1:605331/1‑149 (MQ=34) cGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGcc < 2:435082/132‑1 (MQ=18) cGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGcc > 1:435082/1‑132 (MQ=17) gCAGCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCcgc < 1:351961/149‑1 (MQ=21) agctgaaaTCAACGCCTGATGCGAAGCTTGACGTGTCTTATCAGGCCGACGCAATACAGC‑G‑CAATAGCCTAATTTAGCATGATTTTGTAGTTTGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGt < 2:138425/142‑1 (MQ=11) aTCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGt < 1:807518/149‑1 (MQ=21) tCCGACATCAACGCCTGATGCGATGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAAAGCATGATGCGTCGCTTGCCGTGTc < 2:628811/149‑1 (MQ=11) cGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCTGACCTCAACGCCTGATTCGACGATTGCCGCGTCtc > 1:476803/1‑148 (MQ=255) cGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCtt > 2:532701/1‑149 (MQ=25) cGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCtt < 2:79277/149‑1 (MQ=25) aCATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATCGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTAt < 1:704212/149‑1 (MQ=38) aCATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTAt > 2:13671/1‑149 (MQ=25) aTCAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCa < 2:698600/149‑1 (MQ=255) aaCGCCTGATGCGACGCTTGACGTGTTGTATCATGC‑‑ACACCAAGCGGCTGACTATGGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc < 1:194645/149‑1 (MQ=11) aaCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGCCTGATGCGACTCTTGCCGCGTCTTCTCTGGc > 2:358433/1‑149 (MQ=255) aaCGCCGGAGGCGACGCTTACCGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc < 2:142898/149‑1 (MQ=255) aCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc > 1:566551/1‑149 (MQ=25) aCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTACCGCGTCTTATCAGGcc > 2:269562/1‑149 (MQ=14) gCCTGATAAGACGCGTTAAGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTc < 2:418423/137‑1 (MQ=14) tcgacgCGACGCTTAACGCGGCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTatc < 1:143570/144‑3 (MQ=255) cTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGCCCTACg > 2:143570/1‑149 (MQ=37) gATGCGACTCTTAACGCCGCTTATCAGGCGTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGCTCGAAT‑CGGCGCTTGACGCCGCATCCGAAATCAACGCCTGATGCGACGCTTGCCGCGCCTTATCAGGCCTACGcc < 2:604596/149‑1 (MQ=11) aggttaCGCTTAATGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCACGCCTACGCCa < 1:822048/144‑1 (MQ=255) aTGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTatctta > 1:285546/1‑144 (MQ=2) gCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGa < 1:755428/149‑1 (MQ=38) aCGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTTTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAg > 2:594462/1‑149 (MQ=37) gccgcgTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGc > 2:365603/3‑106 (MQ=11) gaCGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGCCTGATGc < 1:365603/105‑1 (MQ=17) aTCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGAt < 1:431190/94‑1 (MQ=34) aTCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGAt > 2:431190/1‑94 (MQ=33) gCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGCCAGCGCAATAGCCTGATTTAGCGt > 1:541078/1‑149 (MQ=38) ctgagCCAGACATC‑G‑CAATAGCCTGATTTAGCGTTATTTTGTAGGTGAAGCGATTCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGa < 1:824921/145‑1 (MQ=11) cTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGt < 2:279280/103‑1 (MQ=25) cTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGt > 1:279280/1‑103 (MQ=255) cGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAttt > 1:96830/1‑149 (MQ=38) tccAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGcc > 2:440766/2‑95 (MQ=38) gCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGcc < 1:440766/95‑1 (MQ=255) gCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAg < 1:314818/107‑1 (MQ=38) gCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAg > 2:314818/1‑107 (MQ=38) gCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAtttt < 2:605331/149‑1 (MQ=38) cAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCGACGCCTGATGCGACGCTTGCCGCGTCTTATCAGTCCTACGCCATACGGCGCAATAGCTTGATTTCGCGTGATTTTGt > 1:687893/1‑149 (MQ=11) aGACAGC‑G‑CAATAGCCTGATTTATCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTa < 1:713349/149‑1 (MQ=38) aGC‑G‑CTATAGCCTGATTGAGCGTGATTATGTGAGGCGGATAAGGCG‑TTTACGCCGCATCAGACATCAACGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCAACGCCAGACCGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTc < 2:586070/149‑1 (MQ=11) tAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAg < 2:96830/149‑1 (MQ=37) cTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGc < 1:302846/113‑1 (MQ=255) gATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGttt > 1:665206/1‑149 (MQ=38) gATTTAGCGTGATTTTGTAGGCCGTATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGCTTTAGCGTGATTTTGTAGGTCGGATACGTCGttt > 2:611862/1‑149 (MQ=11) ctttggggTGATTTTTTAGATCGGGTAGGGGG‑TTTCCTCCGCATCAGGTATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTa < 2:264015/142‑1 (MQ=11) tttAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATg > 2:207923/1‑62 (MQ=37) tttAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATg < 1:207923/62‑1 (MQ=37) gCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGATATCAGCGCCTGATGCGACGGTTACCGCGTCTTATCAGGCCTATGTCAGACAGCGCAATGGCCTTATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCg < 2:310090/149‑1 (MQ=11) gCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc < 2:378801/83‑1 (MQ=255) gCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc > 1:378801/1‑83 (MQ=255) cGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAgg < 2:53447/81‑1 (MQ=255) cGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAgg > 1:53447/1‑81 (MQ=255) gATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATc > 2:446824/1‑149 (MQ=39) ttttTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGa < 1:594462/149‑1 (MQ=255) tGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACa < 1:446824/149‑1 (MQ=39) gTAGGTCGGATAAGTCG‑TTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACAt < 1:299288/149‑1 (MQ=17) ggTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTc < 1:787439/61‑1 (MQ=255) ggTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTc > 2:787439/1‑61 (MQ=255) g‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGCCAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTATCGCCGCATCCGACATCCACGCCCGATGCGAc > 2:344295/1‑149 (MQ=11) gccgcATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGcc > 2:507549/1‑116 (MQ=38) gccgcATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGcc < 1:507549/116‑1 (MQ=37) gccgcATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTaa < 1:785614/149‑1 (MQ=34) tCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTc > 1:802556/1‑149 (MQ=35) aCATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGttt < 1:821934/101‑1 (MQ=38) aTCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACg > 1:770975/1‑120 (MQ=35) aTCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACg < 2:770975/120‑1 (MQ=35) aCGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTc < 2:181477/139‑1 (MQ=31) aCGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTc > 1:181477/1‑139 (MQ=31) | GTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGC‑G‑CAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTC > NC_000913_3_hsa_tpiA/4295894‑4296179 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |