| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_hsa_tpiA | 3,781,152 | 0 | A | G | 20.5% | 179.5 / 22.4 | 83 | intergenic (+135/‑63) | lldD/trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base A (48/18); new base G (0/17); total (48/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.23e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
ATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCT > NC_000913_3_hsa_tpiA/3781007‑3781300 | aTGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAgggg < 3:309132/150‑1 (MQ=255) ggCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGaaaa < 4:525566/150‑1 (MQ=255) ggCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGaaaa < 3:713410/150‑1 (MQ=255) gCATAGTGTTTGGCGCCCCTTCACCCTAACCCTCTCCCTGAGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTGCTCCTTCACGCTTAAACGTCACGGCACTCTGTTTTTCTCCCTCGCCCCTCCGTGGAGAGGGCC‑GGGGTGAGGGGAAAAg < 2:1121514/150‑1 (MQ=255) aTAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGc > 2:46518/1‑150 (MQ=255) tCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCa > 2:533524/1‑150 (MQ=255) ttGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCTTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGc > 2:549375/1‑150 (MQ=255) cgcCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAgg > 4:95156/1‑130 (MQ=255) cgcCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAgg < 3:95156/130‑1 (MQ=255) cgcCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTcc > 4:433762/1‑149 (MQ=255) cgcCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCa > 4:730402/1‑150 (MQ=255) cgcCCCCCCCCCCTCCCCCTCCCCCCCGGGGAGGGGGGC‑CCGTCCGGCGCGTTTTGTACCCCCTCCCTCGAAAGCGCCGCCCCCCTTTTTTTTCCCCCCCCCCCCCCCGGGGGGGGGGGCC‑GGGGTGGGGGGAAAAGGCCGCACTGCTCa < 2:456915/150‑1 (MQ=255) gcCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCAc > 1:377870/1‑150 (MQ=255) gcCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCAc > 4:75954/1‑150 (MQ=255) ccccccTACCCCCCCCCCCCGGGGAGGGGGGC‑CCGTCCGGCTCTTTTTGTCCCCCCTCACTCTAAACCCCCCCCGCCCTTTTTTTTCCCCCCCCGCCCCTCGGGGGGGGGGGCC‑GGGGGGAGGGGAAAAGGCCGCACTGCTCACCAAttt < 1:501333/147‑1 (MQ=255) ccgaaCCCGCCCCCGCGGGGGGGGGGGA‑CCGTGGGGCGCTGTTGTTCCTCCCCCACTCGGAACCACCCCCGCCCTTTTTTTTCCCCCCCCGCCCCCCGGGGGGGGGGGCG‑GGGGGGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg < 4:654097/147‑1 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg > 2:1175220/1‑150 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg > 2:696312/1‑150 (MQ=255) cccaCCCCCCCCCCCCGGGGGGGGGGACCCGTCCGGCGCTTTTTGTCCCCCCCCCCCCTAAACCGCCCCCACCCCCTTTTTTCCCCCCCCCCCCCCCGGGGGGGGGGGCG‑GGGGGGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg < 2:464480/147‑1 (MQ=255) cccccccccGCAGGAGGAGGGGA‑CCTTTCGGGTCTTTATTTCCCCCCCCCCTCTGAAACGACACCGCCGTCTTTTTTTCCCCCTCGCCCCTCCGGGGAGGGGGCC‑GTGGGGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATc < 1:806225/144‑1 (MQ=255) ctctCCCTGAGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCt > 3:77576/1‑150 (MQ=255) ctctCCCTCAGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCt > 1:82359/1‑150 (MQ=255) ctctCCCTCAGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGGGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCt > 4:373135/1‑150 (MQ=255) ccTCAGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcccc > 2:496096/1‑150 (MQ=255) cTCAGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGccccc > 3:239473/1‑150 (MQ=255) aGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCa > 1:742402/1‑150 (MQ=255) ggAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACt > 1:667574/1‑150 (MQ=255) ggggggC‑CTGTTCGGCGCTGTATGTCCTCCCTCACTTGAAAACGCCCCCGCCTTTTTTTTTTCCCCCCCCCCCCCCGGGGGGGGGGGCG‑GGGGGGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAg < 1:307012/148‑1 (MQ=255) gggccccGTCCGGCGCGGTATGCCCCCCCCCCCTCGAAAACGCCCCCCCCCTTTTTTTTCCCCCCCCGCCCC‑CCGGGGGGGGGGCCGGGGGGGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggg < 1:696312/145‑1 (MQ=255) gggA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACCGCCCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgcgg > 1:33756/1‑150 (MQ=255) cGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAgg < 1:36187/90‑1 (MQ=255) cGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAgg > 2:36187/1‑90 (MQ=255) gTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGaaaa < 4:179178/95‑1 (MQ=255) gTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGaaaa > 3:179178/1‑95 (MQ=255) gcgcTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGAGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTa > 1:927097/1‑150 (MQ=255) ttgtcccccctccctCTAAACGGCCACCGCCCTTTTTTTTTCCCCCGCCCCCCGCGGGGGAGGGGGCG‑GGGGGGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCg < 2:1179171/143‑1 (MQ=255) tttaCTCCCCCCCTCTGAACCGACCCCGCGCTTTTTTTTTCCCCCCCCCCCCTCGGGGGGGGGGGCG‑GGGGTGGGGGCAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGt < 4:139812/148‑1 (MQ=255) gtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGtc > 1:757584/1‑149 (MQ=255) taCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCTTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAg < 1:626109/81‑1 (MQ=255) taCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCTTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAg > 2:626109/1‑81 (MQ=255) aCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACt > 1:360193/1‑150 (MQ=255) aCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACt > 1:667258/1‑150 (MQ=255) cTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACtt > 1:1079955/1‑150 (MQ=255) tCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACttt > 1:190773/1‑150 (MQ=255) ccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc > 3:205301/1‑150 (MQ=255) cctctGAACCGCCCCCGGTCTTTTTTTTCCCCCCTCGCCCCCCCGGGGGGGGGGCG‑GGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAc < 4:342523/149‑1 (MQ=255) aCTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAc > 1:906575/1‑150 (MQ=255) aCTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAc > 1:115950/1‑150 (MQ=255) tctGAAACGACACCGCACTCTTTTTTTTTTTTTTTTCCATCCGGGGAGGGGGCC‑CGGGTGAGGGGGAAAGGCCGCACTGCTCACCAATTTTCTCCTCTCCTTCCCCCGCACTAAGGGGCCAGTATTCTATACTTCTTTCTTTTCGAACCa > 2:778524/1‑150 (MQ=255) ctaaaccGACCCCGACCTTTTTTTTTCCCCCCCGCCCCCCGGGGGAGGGGGCG‑GGGGTGGGGGAAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAg < 2:628841/144‑1 (MQ=255) tGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGa > 1:1134370/1‑150 (MQ=255) gAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGaa > 3:444586/1‑150 (MQ=255) cGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTc > 1:911544/1‑150 (MQ=255) gccttttttttttCCCCCGCGCCCCGCGGGGGGGGGGGCG‑GGGGGGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCaaa < 2:688547/144‑1 (MQ=255) cACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAAt > 2:386719/1‑150 (MQ=255) ttttttttCCCCCCGCCCCCTGCGGGGGGGGGGCG‑GGGGTGGGGGAAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTg < 1:680839/149‑1 (MQ=255) tttttcCGCCCCCCCCCCCCGGGGGGGGGGGCG‑GGGGGGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGc < 4:657475/150‑1 (MQ=255) tcCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcatca > 1:620830/1‑150 (MQ=255) cccTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcatcat > 1:628667/1‑150 (MQ=255) cTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATcc > 4:468994/1‑150 (MQ=255) cGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATg > 2:794662/1‑93 (MQ=255) cGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATg < 1:794662/93‑1 (MQ=255) cGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACa < 3:537632/100‑1 (MQ=255) cGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACa > 4:537632/1‑100 (MQ=255) ccccccGGGGGAGGGGCCG‑GGGGGGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCt < 2:742402/150‑1 (MQ=255) cccTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTa < 1:1025575/102‑1 (MQ=255) cccTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTa > 2:1025575/1‑102 (MQ=255) cccgggggggggggCCGGGGGTGGGGAGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCttt < 3:79857/146‑1 (MQ=255) cTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTg > 3:456452/1‑150 (MQ=255) cgggggAG‑GGGCC‑GGGGGGGGGCGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGTCAAATACTGGCAACATCATCCGTCTTTgcgc < 1:482855/148‑1 (MQ=255) gggggggggggCG‑GGGGGGGGGGAAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTgcgc < 3:433762/149‑1 (MQ=255) cGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTgcgc > 3:249880/1‑150 (MQ=255) gggAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcat > 3:675139/1‑133 (MQ=255) gggAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcat < 4:675139/133‑1 (MQ=255) ggCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCgg > 1:323962/1‑150 (MQ=255) gCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGc < 2:377870/150‑1 (MQ=255) cgggggTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCt < 3:730402/148‑1 (MQ=255) c‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCtt > 1:227202/1‑150 (MQ=255) c‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCtt > 3:699445/1‑150 (MQ=255) gggTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTc < 1:1016953/150‑1 (MQ=255) tGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTc < 4:456452/150‑1 (MQ=255) tGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTc > 2:952764/1‑150 (MQ=255) gAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCt < 3:239238/150‑1 (MQ=255) aGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg > 2:582441/1‑58 (MQ=255) aGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg < 1:582441/58‑1 (MQ=255) | ATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGA‑CCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCT > NC_000913_3_hsa_tpiA/3781007‑3781300 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |