| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2900520 = | 105 (0.910) | 8 (0.070) | 7/278 | 13.4 | 7.6% | intergenic (‑247/‑72) | ygcW/yqcE | putative SDR family oxidoreductase/putative MFS transporter, inner membrane protein |
| ? | NC_000913 | 2900560 = | 98 (0.910) | intergenic (‑287/‑32) | ygcW/yqcE | putative SDR family oxidoreductase/putative MFS transporter, inner membrane protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACGTAAATAAGCCAGGTCGAAACTAACGCCGCCGCTAAAACTAATTATCGCGAGGGTTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2900678‑2900520‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttacttttctc‑TTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTAGCGGCGGCGTTAGTTTCGACCTGGCTTATTTACGTTATATTTATCAAATTCCCATGGCGAAATTTA > NC_000913/2900560‑2900709 ACGTAAATAAGCCAGGTCGAAACTAACGCCGCCGCTAAAACTAATTATCGCGAGGGTTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTA > 2:959322/1‑151 CGTAAATAAGCCAGGTCGAAACTAACGCCGCCGCTAAAACTAATTATCGCGAGGGTTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTAC > 1:720781/1‑151 GTAAATAAGCCAGGTCGAAACTAACGCCGCCGCTAAAACTAATTATCGCGAGGGTTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACT > 2:1278032/1‑151 AAATAAGCCAGGTCGAAACTAACGCCGCCGCTAAAACTAATTATCGCGAGGGTTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTT > 2:1778775/1‑151 AAATAAGACAGCTCGAAACTAACGCCGCCACTAAAACTAATTATCGAGAGGGATATCCAAAGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTCATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTT < 1:1371452/151‑1 ATAGGCCAGCTCGAAACTAACGCCGCCGCTAAAACTAATTATCGCGAGGGTTATCCAACGGAGATATGAGTTGTGTGGGATATCGTATTACCATTTAAAAAAAAAAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTC < 2:1905510/151‑1 AAGCCAGGTCGAAACTAACGCCGCCGCTAAAACTAATTATCGCGAGGGTTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGAAAAAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTC < 2:1156773/151‑1 TTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTC‑TTTTTTTTGTCTATTACAAATGGGAATACGATATTCAACACAACTCATATCGCCGTTTGATATCCCTCGCGATAATTAGTTTTATAGGCGGC > 1:429496/1‑151 caACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTC‑TTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTAGCGGCGGCGTTAGTT < 1:972823/149‑1 AAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTC‑TTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTAGCGGCGGCGTTAGTTTCGATCTtg > 1:239423/1‑149 AAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTC‑TTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCAGTTGGATAACCCTCGCGATAATTGGTTTTAGCGGCGGCGGTAGTGTCGACCTAGC > 1:1981600/1‑151 GAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTCTTTTTTTTTTTTTTTTTCAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTAGCGGCGGCGTTAGTTTCGACCTGGCT > 2:1158366/1‑151 GAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTC‑TTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCTGTTGGATACCCCTCGCGATAATTAGTTTTAGCGGCGGCGTTAGTTTGGACCTGGATT > 1:1819725/1‑151 GAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTC‑TTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGAAAATTAGTTTTAGCGGCGGCGTTAGTTTCGACCTGACTTAT > 1:85012/1‑151 AAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTC‑TTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCTTTGGATAACCCCCGCGAAAAATAATTTTAGTGGCGGCATTAGCATCGACGTGGATTAGTT > 1:917730/1‑151 TTACTTTTCTCTTTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTAGCGGCGGCGTTAGTTTCGACCTGGCTTATTTACGTTATATTTATCAAATTCCCAT < 1:1158382/151‑1 TTACTTTTCTC‑TTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTAGCGGCGGCGTTAGTTTCGACCTGGCTTATTTACGTTATATTTATCAAATTCCCATG < 1:1624216/151‑1 CTTTTCTC‑TTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGTTAACCCCCGCGATAATTAGTTTTAGCGGCTGCGTTAGTTTCGACCTGGCTTATTTACGTTATATTTATCAAATTCCCATGGCG > 2:734477/1‑151 CTTTTCTC‑TTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGGTAACCCTCGCGATAATTAGTTTTTGTGGCGGCGTTAGTTTCGACCTGGTTTATTTACGCTATATTTATCAAATTTTCATAGCG > 1:1128056/1‑151 TTCTC‑TTTTTTTTTTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTATCGGCGGCGTTAGTTTCGACCTGGCTTATTTACGTTATATTTATCAAATTCCCATGGCGAAA > 2:1057496/1‑151 C‑TTTTTTTTTTTTTTTACAAATGGGAATACGATATGCAACACAACTCGTATCGCCGTTGGATAACGCTCGCGATAATTAGTTTTAGCGTCGGCGTTATTTTCGACCTGGCTTATTTACGTTATATTTATCAAATTCCCATGGCGAAATTTt > 2:1081820/1‑150 C‑TTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGTTAACTCTCGCGATAATTAGTTTTATCGGCGGCGTTAGTTTCGACCTGGCTTATTTACGTTATATTTATTAAATTCCCATGGTGAAATTTA > 1:570804/1‑151 C‑TTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCTCGATAATTAGATTTAGCGGCTGCGTTATTTTCGACCTGGCTTATTTACGTTATATTTATCAAATTTCCATGGCGAAATGTA > 2:1895346/1‑151 C‑TTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGAGCATAAGTTCTATCTGCTGCGTTATTTTCCACCGGGCTTATTTACGTTATCTTTATCACATTCCCATGGCGAAgtata > 1:1742585/1‑146 ACGTAAATAAGCCAGGTCGAAACTAACGCCGCCGCTAAAACTAATTATCGCGAGGGTTATCCAACGGCGATATGAGTTGTGTTGCATATCGTATTCCCATTTGTAATAGACAAAAAAAAGAGAAAAGTAAGCCGCCCTTTCAGGTGGATTACTTTTCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2900678‑2900520‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttacttttctc‑TTTTTTTTGTCTATTACAAATGGGAATACGATATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTAGCGGCGGCGTTAGTTTCGACCTGGCTTATTTACGTTATATTTATCAAATTCCCATGGCGAAATTTA > NC_000913/2900560‑2900709 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |