| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,850,007 | 0 | G | A | 43.2% | 85.1 / 39.2 | 74 | P44S (CCG→TCG) | uhpB | sensory histidine kinase in two‑component regulatory sytem with UhpA |
| Reads supporting (aligned to +/- strand): ref base G (36/6); new base A (0/32); total (36/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.15e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTCAGTAAACTACCGATCATCAATAACGGAAAATGGGTTAAA‑CCGACCGCC‑TGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCGGGAGAACAACGTCTTCATCACCAGCCATCAAAC > NC_000913/3849859‑3850151 | gTCAGTAAACTACCGATCATCAATAACGGAAAATGGGTTAAA‑CCGACCGCC‑TGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑a > 1:136200/1‑150 (MQ=255) cAGTAAACTACCGATCATCAATAACGGAAAATGGGTTAAA‑CCGACCGCC‑TGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑aaa < 1:1452848/150‑1 (MQ=255) cAGTAAACTACCGATCATCAATAACGGAAAATGGGTTAAA‑CCGACCGCC‑TGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAAt > 2:1453262/1‑151 (MQ=255) cAGTAAACTACCGATCATCAATAACGGAAAATGGGTTAAA‑CCGACCGCC‑TGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAAt < 1:1329535/151‑1 (MQ=255) aaaCTACCGATCATCAATAACGGAAAATGGGTTAAA‑CCGACCGCC‑TGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAAc < 2:874488/150‑1 (MQ=255) aaaCTACCGATCATCAATAACGGAAAATGGGTTAAA‑CCGACCGCC‑TGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAAc > 1:248159/1‑150 (MQ=255) tACCGATCATCAATAACGGAAAATGGGTTAAA‑CCGACCGCC‑TGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCAc > 2:1086253/1‑151 (MQ=255) aCCGATCATCAATAACGGAAAATGGGTTAAA‑CCGACCGCC‑TGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCAcc > 1:369427/1‑151 (MQ=255) cGATCATCAATAACGGAAAATGGGTTAAA‑CCGACCGCC‑TGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGc > 1:460495/1‑151 (MQ=255) atcatcAATAACGGAAAATGGGTTAAA‑CCGACCGCC‑TGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGcc > 1:34888/1‑150 (MQ=255) tcatcaATAACGGAAAATGGGTTAAA‑CCGACCGCC‑TGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCat > 2:598036/1‑151 (MQ=255) catcaATAACGGAAAATGGGTTAAA‑CCGACCGCC‑TGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCat > 1:703125/1‑150 (MQ=255) aaTAACGGAAAATGGGTTAAA‑CCGACCGCC‑TGCGTTAGCCAGTAAATCAGCAGCAACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATc > 2:198732/1‑149 (MQ=255) tAACGGAAAATGGGTTAAA‑CCGACCGCC‑TGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAggg > 1:510181/1‑151 (MQ=255) aaaaGGGTTAAACCCGCCCGCC‑TGCGTTAGCAAGAAAACCAGCAGCCCCCCCGCGCCCAGAAATACGGGCCAGTACCCGCGCGGGCA‑TGGCAGCATTAGCCCCAGACGCAGACCAAACGA‑AAATAACAGCACCGCCATATCAGGGCGCTCa < 2:787267/151‑1 (MQ=255) aaaaGGGTTAAACCCGCCCCCC‑TGGGTTACCCAGAAAACCAGCAGCCCCCCCGCCCCCAGAAATACGGGCAAGTACCCGCGCGGGCA‑TTGCAGCATTACCCCCAGCCGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCa < 2:181978/151‑1 (MQ=255) aTGGGTTAAA‑CCGACCGCC‑TGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAAcc > 2:1038934/1‑151 (MQ=255) ggTTAAA‑CCCCCCCCCTTGCTTTAGCCAGAAAATCAGCAGCCACCCCCCCCCCAGCAATACGGGCAGGAACCCGCG‑GGGCATTTGCAGCATTAGCCCCAGACGCACCCAAAAAGA‑AAAAAACAGCACCGCCATATCAGGGCGCTCAACCAg < 1:645869/151‑1 (MQ=255) gTTAAA‑CCGACCGCC‑TGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAAcc > 1:762841/1‑147 (MQ=255) tAAA‑CCGACCGCC‑TGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGc > 1:1188571/1‑151 (MQ=255) aaa‑CCGACCGCC‑TGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGc > 1:485022/1‑150 (MQ=255) ccgCC‑TGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGAt > 1:234563/1‑151 (MQ=255) gCC‑TGCGTTAGCAAAAAAACCAGCACCCCCCCCGCGCCCAGAAATCCGGGCCAGTACCCGCGCGGGCA‑TTGCAGCATCACCCCCAGACGCAGACAAAACGA‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATAc < 1:862844/151‑1 (MQ=255) gTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCcac > 2:1213939/1‑150 (MQ=255) aGTAAATCAGCAGCCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCaaa > 2:1419643/1‑150 (MQ=255) cagcacCCCCCCCGCGCCCAGAAATGCGGGCAAGTACCCGCGCGGGCA‑TTGCACCATTAGCCCCAGACGCAGCCAAAACGA‑AAAAAACACCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCg < 1:597981/151‑1 (MQ=255) agccgcccccccccccccAGCAATCCGGCCCAGTACCCGCGGGGGCA‑TGGCAGCATTACCCCCAGCCGAAAACAAAAGGA‑AAAAAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCgg < 2:879523/136‑1 (MQ=255) cagcCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGc > 1:1055477/1‑150 (MQ=255) gcCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGc > 2:488667/1‑148 (MQ=255) ccccccGCGCCAAGAAATCCGGGCCAGTACCCGCGGGGGCA‑TTGCAGCATTACCCCCAGACGCAGACAAAACGA‑AAAAAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAgaga < 2:732032/147‑1 (MQ=255) ccccccGCCCCCAGCAATGCGGGCCAGTACCCGCGCGGGCA‑TTGCAGCATTAGCCCCGGACGCAGACAAAAGGA‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAgaga < 2:1308149/147‑1 (MQ=255) ccccGCCCCCAGCAATACGGGCCAGTACCCGCGCGGGCA‑TTGCAGCATTACCCCCAGACGCAAACAAAACGA‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGagaag < 2:665853/149‑1 (MQ=255) ccGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAgaga > 1:1311977/1‑147 (MQ=255) gcCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATaaa > 1:715744/1‑150 (MQ=255) ccccAGAAAACCGGGCCAGTACCGGCGCGGGCA‑TTGCAGCATTACCCCCAGACGCAGACAAAACGA‑AAAAAACGGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATaaaa < 1:1453266/150‑1 (MQ=255) cccagaaaccgggcccAGTACCCGCGGGGGAA‑TTGCAGCATTACCCCCAGCCGAAGACAAAACGA‑AAAAAACCGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATaaaaa < 1:1204382/137‑1 (MQ=255) cccAGAAATCGGGCCCAGTACCCGGGGGGGCA‑TTGCACCATGAGCCCAAGCCGCAGCCAAAAGGA‑AAATAACACCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATaaaaa < 2:136193/151‑1 (MQ=255) ccgccaaggcGGGCCAGTACCCGCGGGGGCA‑TTGCAGCATAGGCCCGAGACGAAAAACAAGCGA‑AAAAACCGGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATaaaaaa < 1:938557/142‑1 (MQ=255) aGCAATACGGCCCATTACCCGCGGGGGCA‑TTGCAGCATTACCCCCAGACGCAGCCAAAACGA‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGc < 2:507434/151‑1 (MQ=255) cAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGc > 1:520503/1‑149 (MQ=255) aaTACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAgg > 1:1432974/1‑151 (MQ=255) gggCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAAt > 1:454017/1‑150 (MQ=255) gggCCAGTACCCGCGGGGGCA‑TTGCAGCTTTAGCCCAAGACGCAAACCAAACGA‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATa < 2:40927/151‑1 (MQ=255) ccattccccgggggggCA‑TTGAATCTTTACCCCCAGACGCAGACCAAACGA‑AAAAACCAGCCCCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACg < 1:435485/138‑1 (MQ=255) agtccccGCGCGGGCA‑TTGCAGAATTACCCCCAGACGCAGACAAAACGA‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGt < 1:1291505/146‑1 (MQ=255) gTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGt > 1:729431/1‑150 (MQ=255) ccccGCGCGGGCT‑TGGCAG‑AATAGCCCCCAGCCCAAGCCAAACGGAAAAAAAAAACACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAAt < 1:635167/149‑1 (MQ=255) acccGCGCGGGCA‑TTGCAGCATTACCCCCAGACGCAGACAAAACGA‑AAAAAACAGCCCCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTaa < 1:1177260/148‑1 (MQ=255) ccGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACAAAACGA‑AAAAAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTa < 2:8464/151‑1 (MQ=255) cgcgggGGCT‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGA‑AAAAAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTaa < 2:369420/151‑1 (MQ=255) gcgGGCA‑TTGAAGCATGAGCCCCAGACGAAAACAAAACGA‑AAAAAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCg < 1:486973/151‑1 (MQ=255) gggCA‑TTGCAGCATTACCCCGAGACGCAGACCAAACGA‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCggg < 2:1156143/151‑1 (MQ=255) gCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCggg > 2:734480/1‑149 (MQ=255) gCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCggg > 1:992763/1‑149 (MQ=255) cA‑TGGCAGCATCAGCCCCAGACGCAGACAAAACGA‑AAAAAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCGGgaga < 1:1452181/151‑1 (MQ=255) atagcagatttccccccAGCCGCAGACAAAAGGA‑AAAAAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCGGGAGaa < 2:1220276/138‑1 (MQ=255) gtGCGGCATTACCCCCAGACGCAAACAAAAAGA‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCGGGAGaac < 2:223089/150‑1 (MQ=255) ggcagcaTTACCCCCAGCCGCAGACCAAACGG‑AAAAAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCGGGAGaac < 2:510175/149‑1 (MQ=255) ggcagcaTTACCCCCAGCCGAAGACCAAACGA‑AAAAAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCGGGAGaac < 2:1071053/149‑1 (MQ=255) gcaccaTTACCCCCAGACGCAGACAAAAGGA‑AAAAAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCGGGAGaacaa < 2:460486/151‑1 (MQ=255) cgcattgccccccAGCCCCACACCAACCAA‑AAAAAACACCTCCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCGGGAGaacaac < 2:931455/142‑1 (MQ=255) cagcaTTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCGGGAGaacaac > 1:118496/1‑151 (MQ=255) caccttcccccccAGAGCCAAACAAAACAA‑AAAAAACACCCCCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCGGGAGaacaac < 1:1086252/142‑1 (MQ=255) agcaTTACCCCAAGACGAAAACCAAACGA‑AAATACCAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCGGGAGAACAACg < 2:485014/151‑1 (MQ=255) aTTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCGGGAGAACAACGTCt > 1:1447383/1‑151 (MQ=255) acccccCGACGCAGACCAAGGAA‑AAAAAACCTCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCGGGAGAACAACGTCTtca < 1:1076757/149‑1 (MQ=255) aGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCGGGAGAACAACGTCTtc > 2:1146176/1‑150 (MQ=255) cccAGCCGAACACAAAACGA‑AAAAAACACCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCGGGAGAACAACGTCTtcatca < 1:655628/151‑1 (MQ=255) ccAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCGGGAGAACAACGTCTTCATCAc > 1:1014127/1‑151 (MQ=255) cAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCGGGAGAACAACGTCTTCATCAcc > 1:276467/1‑151 (MQ=255) gCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCGGGAGAACAACGTCTTCATCACCAGcc > 1:499908/1‑150 (MQ=255) gACCAAACAA‑AAAAAACACCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCGGGAGAACAACGTCTTCATCACCAGCCATCa < 1:1133293/151‑1 (MQ=255) aaaCGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCGGGAGAACAACGTCTTCATCACCAGCCATCAAAc > 2:1118629/1‑150 (MQ=255) aaaCGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCGGGAGAACAACGTCTTCATCACCAGCCATCAAAc > 1:1314089/1‑150 (MQ=255) | GTCAGTAAACTACCGATCATCAATAACGGAAAATGGGTTAAA‑CCGACCGCC‑TGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATACGGGCCAGTATCCGCGCGGGCA‑TTGCAGCATTAGCCCCAGACGCAGACCAAACGG‑AAATAACAGCACCGCCATATCAGGGCGCTCAACCAGATGCAGGCTGATACTCCACAGGCAAAACCATGCGGCAGAGAAGATAAAAAAGCAGGCAATAACGGTAATTAAGCGGGAGAACAACGTCTTCATCACCAGCCATCAAAC > NC_000913/3849859‑3850151 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |