Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	15,410	0	T	G	41.7%	112.5 / 10.5	60	intergenic (+112/‑35)	dnaJ/insL1	chaperone Hsp40, DnaK co‑chaperone/IS186 transposase
Reads supporting (aligned to +/- strand):  ref base T (4/31);  new base G (25/0);  total (29/31)
Fisher's exact test for biased strand distribution p-value = 4.57e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTC‑TGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGG  >  NC_000913/15263‑15530                                                                                                                                                     |                                                                                                                          ggTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTtgt                                                                                                                        <  1:719963/151‑1 (MQ=255)    gtgAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTgg                                                                                                                      <  2:383479/150‑1 (MQ=255)    gtgAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGT‑AAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTa                                                                                                                    <  2:287577/151‑1 (MQ=255)      gaagaaGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACACCCCCAAGAGCAAACTT‑TAGGGGTGTGGGAt                                                                                                                   >  1:334653/1‑151 (MQ=255)      gaagaaGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGCAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGGCACTCTCATAAGGGCTAACTT‑AAGGGGTGTggga                                                                                                                    >  2:967089/1‑148 (MQ=255)        agaagTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTa                                                                                                                 <  1:19967/151‑1 (MQ=255)            gTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGGTACTCCCACAAAAGCTAAACT‑AAGGGGTggggggttaaggc                                                                                                             >  2:1191922/1‑142 (MQ=255)              tttttGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGGCACTCCCCTAAGCGCTAACTT‑TAGGGGTGTGGGATTACGCCTg                                                                                                           >  1:814925/1‑151 (MQ=255)                tttGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGACACTCCCCTAAGCGCCAACTT‑AAGGGGTGTGGTATTACGCCCGat                                                                                                         >  2:1203842/1‑151 (MQ=255)                tttGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGa                                                                                                          <  2:718641/150‑1 (MQ=255)                 ttGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGGCACTCCCATAAAAGGTAAATT‑AAAGGGTGTggggttttgcctggt                                                                                                         >  2:358681/1‑137 (MQ=255)                   gacgacCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGGCGCTTCCAAAAACGCCAACTT‑TAGGGGTGTGGGTTTACGACTggtttt                                                                                                      >  2:839733/1‑146 (MQ=255)                   gacgacCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATg                                                                                                      <  2:319252/151‑1 (MQ=255)                   gacgacCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATg                                                                                                      <  1:1030536/151‑1 (MQ=255)                    acgacCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGa                                                                                                     <  2:254265/151‑1 (MQ=255)                       acCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGAttt                                                                                                  <  1:736244/151‑1 (MQ=255)                           gACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTCACTCCCCTAAGCGCTAACTT‑AAAGGGTGTGGTATTACGCCTGGTATGAtttta                                                                                                >  1:835689/1‑147 (MQ=255)                           gACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGAGCACTCCCCCAAACGCTAACTT‑AAGGGGTTTGGGATTAAGCCTGATATGATTTaa                                                                                                >  2:175229/1‑149 (MQ=255)                              ccGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGGCACTCCCCCAAGCGCCTACTT‑TAAGGGTGTGGGATTACGCCCGGTATTATTTTAAGTGc                                                                                           >  2:593181/1‑151 (MQ=255)                                   aaCCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATg                                                                                      <  2:29080/151‑1 (MQ=255)                                            aaaaGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTActct                                                                             <  2:425702/151‑1 (MQ=255)                                              aaGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATAAATCCCCCAAACGCCAAATT‑TAAGGGTGGGGGATTACGCCTGGTATGATTTTAAGTGCCGATGAATTaatttcc                                                                           >  2:54190/1‑145 (MQ=255)                                               aGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCAc                                                                          <  1:910756/151‑1 (MQ=255)                                                gCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGGCACTCCCATAAACGCTAACTT‑AAAGGGTGTGGGATTATGCCTGAGATTATTTTACATGCCCGTGAAATAATCTCAcc                                                                         >  2:965632/1‑150 (MQ=255)                                                gCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACg                                                                         <  2:139825/151‑1 (MQ=255)                                                  cTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGAGGCGGGGAAAACTCCCCAAAGCGCTAATTT‑AAAGGGTGTGGTCTTACGCCTTCTATTATTTTAAGTGGCGATTAATTACTTTCACGa                                                                        >  1:487194/1‑150 (MQ=255)                                                    gCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATa                                                                      <  1:1232032/150‑1 (MQ=255)                                                        gTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGAGCACTCCCATAAGCGCTAAATT‑TAGGGGTGTGGGATTTTGCCTGATTTTGTTTTAAGGGGCGAAGAATTAATCTCTCGATAAATgg                                                                 >  2:783970/1‑151 (MQ=255)                                                          gggCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTCACTCCCCTAAACGCTAACTT‑AAGGGGTGTGGGATTTCGCCTGATATGATTTTACGTGCCGATGAATTACTCTCCCGATAAATGGTc                                                               >  1:1044021/1‑151 (MQ=255)                                                          gggCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTCACTCCCATAAACGCCCACTT‑AAAGGGTGTGGGGTTTCGCCTCATATTATTTTAAGTGCCGATGAATTACTCTCCCGATAAATGGTc                                                               >  1:114960/1‑151 (MQ=255)                                                            gCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAg                                                             <  1:829684/151‑1 (MQ=255)                                                             cAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGc                                                            <  1:295397/151‑1 (MQ=255)                                                             cAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGc                                                            <  1:14023/151‑1 (MQ=255)                                                                 ccTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAAtt                                                        <  2:398991/151‑1 (MQ=255)                                                                    gggTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCCTAAAAGCCAACTT‑TATGGTTTTTGTGGTAGTCCTTGAATTATTTAACGTGCCGGTGAATTACTCTCACCATAAATgggtaatgattttc                                                     >  1:216257/1‑139 (MQ=255)                                                                         aaaaTAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGAGGACTCCCATAAACGCTAACTT‑AAGGGGTGTGGGGTTATGCCTGATATGATTTAACGTGCCGATGAAATACTTTCACGATAAATGGTCAGCAATTCTTGGccc                                                >  2:286605/1‑151 (MQ=18)                                                                            aTAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTC‑TGGCCCatat                                            <  2:1418337/151‑1 (MQ=255)                                                                            aTAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAAATT‑AAGGGGTGTGGGATTACGCCTGATATGATTTTACGTGCCGATGAATTAATCTCACGATAACTGGTCAGCAATTC‑TTGcccctct                                            >  1:587136/1‑147 (MQ=18)                                                                              aGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGTCACTCCCCTAAAAGCCAACTT‑AAAGGGGGTGGGATTTTGGCTGATATAATTTTAAACGCCGATTGAATACTCTTCCCATAACAGGTCAGCAAATT‑TGGCCCATATTg                                          >  2:1232607/1‑151 (MQ=255)                                                                              aGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTC‑TGGCCCATAtt                                           <  2:334658/150‑1 (MQ=255)                                                                               gggTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTC‑TGGCCCATATTgg                                         <  1:1230773/151‑1 (MQ=255)                                                                                   gCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTC‑TGGCCCATATTGGTAAg                                     <  2:288971/151‑1 (MQ=255)                                                                                   gCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAACGCCAAATT‑TAGGGGTGTGGGATTTAGCCTGATATGATTTTAAGTGCCGGTGAAATACTCTCACGATAAATGGTCAGCAATTC‑TTGcccccatttgtta                                      >  1:404174/1‑140 (MQ=255)                                                                                     gTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGGGCACTCCCCTAAGCGCTAAATTAAAGGGTGTTGGTTTTA‑GCCCGCTATGATTTTAAGTGCCGATGAAATACTCTCCACATAAATTGTTAGCAATTT‑TGGCCCATATTGGGAAggc                                   >  1:1219264/1‑149 (MQ=255)                                                                                      gtGAAGATATGCGATCACCGGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATAACTCTCACGATAACTGGTCAGCAATTC‑TGGCCCATATTGGTAAGccc                                  <  2:1240712/150‑1 (MQ=255)                                                                                          aGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCCTAAACGCTAACTT‑AAGGGGTGTGGGATTACGCCTGATATGATTTAAACTGCCGGTGAATTACTCTCCCGATAACTGGTCAGCAATTC‑TGGCCCATATTTGTAAACCCga                                >  1:731781/1‑149 (MQ=17)                                                                                          aGATATGCGAGCACCTGTAAAGTGGCGGGGATCAATCCCATAAGCGGTAACTT‑AAGGGGTGGGGGGTTAAGCCCGATATGGTTTAAAGTGCCGGTGAAATTATTTCCCCGTAACTGGGCAGCAAATT‑TGGGCCCTATTTGTAAGCCCga                                >  2:911316/1‑149 (MQ=255)                                                                                               tGCGAGCACCTGTAAAGTGGCGGGGGGCACCCCCATAAGCGCTGACTT‑TAAGGGTGTGGGTTTTAGCCCGGTATTATTTTACGGGCCGATGAATTATTTTCACGATAAATGGGTAGCAATTT‑TTGGCCATATTTGTAAAACCGAAGAACTg                         >  2:192091/1‑151 (MQ=255)                                                                                                gCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTTACTT‑AAGGGGTGGGGTATTAAGCCTGATATGATTTAAAGTGGCGATGAATTAATCTCACGAAAACTGGTCAGCAATTC‑TTGCCCATATTGGTAAGCCCGAAGAAATgg                        >  1:720446/1‑151 (MQ=17)                                                                                                  gAGCACCTGTAAAGTGGCGGGGGTCACTCCCCTAAACGCTCACTT‑AAAGGGTGTGGGATTACGCCCGGTATGATTTAAAGTGGCGATGAATTACTCTCCCCATAAATTGTCAGCAATTT‑TGGCCCCTATTTGTTAGACCCCAGAAATGGAt                      >  2:245991/1‑151 (MQ=255)                                                                                                  gAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTC‑TGGCCCATATTGGTAAGCCCGAAGAACTGGAt                      <  1:1296590/151‑1 (MQ=255)                                                                                                     cACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTC‑TGGCCCATATTGGTAAGCCCGAAGAACTGGATACt                   <  2:750907/151‑1 (MQ=255)                                                                                                       ccTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTC‑TGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTc                 <  2:488320/151‑1 (MQ=255)                                                                                                            aaaGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTC‑TGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCAc            <  1:221310/151‑1 (MQ=39)                                                                                                              aGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTC‑TGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGt          <  1:166263/151‑1 (MQ=37)                                                                                                               gTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTC‑TGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTa         <  1:358760/151‑1 (MQ=37)                                                                                                                 ggCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTC‑TGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTaa        <  1:859569/150‑1 (MQ=35)                                                                                                                   cGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTC‑TGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGc     <  2:390899/151‑1 (MQ=33)                                                                                                                    ggggATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTC‑TGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGcc    >  2:44862/1‑151 (MQ=33)                                                                                                                      ggATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTC‑TGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCgg  >  2:1439086/1‑151 (MQ=33)                                                                                                                                                     |                                                                                                                          GGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCTGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTT‑AAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTC‑TGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGG  >  NC_000913/15263‑15530

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑