| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 298,960 | 0 | A | C | 48.9% | 103.8 / 36.4 | 89 | Y659D (TAT→GAT) | paoC | PaoABC aldehyde oxidoreductase, Moco‑containing subunit |
| Reads supporting (aligned to +/- strand): ref base A (32/13); new base C (0/43); total (32/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.94e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTTATACACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTGCAGCACACAC > NC_000913/298811‑299107 | gTTATACACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑Ac > 1:65349/1‑151 (MQ=255) tataCACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑Accc > 2:997417/1‑151 (MQ=255) ataCACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑Acccc < 2:168654/151‑1 (MQ=255) cacCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGcc < 1:185508/151‑1 (MQ=255) acCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCa < 1:1065122/151‑1 (MQ=255) gcgTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCatat < 1:1033843/151‑1 (MQ=255) ggCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTg > 2:264812/1‑150 (MQ=255) gCGATAGCCGCGCTCCCGCCGCACAGGCCAAGCCCACCGACACTTTTGGCCTTCATCGGGGAGAATAGGGGGTCGTTACCATCCAGAAAAACCCCCCCCTTTTTTGGG‑ATA‑CCCGCATGAACCGGCCCCTCAT‑ACCCCGCCATATCGTGAt < 2:1383790/151‑1 (MQ=255) gCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGAt > 2:575584/1‑151 (MQ=255) cGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGAtt > 2:530934/1‑151 (MQ=255) cGATAGCCGCGCTCACCCCGCACAGGCCCAGCTCACCGACCCCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGAtt < 1:298977/151‑1 (MQ=255) gATGGCCGCGCTCACGCCGCACAGGCCCAGCTCCCCGACCCCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCACCCAGAAAAATCCCCTCCTTTTTGGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑CCCCCGCCATATCGTGATTa < 2:1296400/151‑1 (MQ=255) gATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGAtt > 2:191632/1‑150 (MQ=255) gCCGCGCTCACGCCGCACAGGCCCAGCTCCCCAACCCCTTTGGCCTTCATGGGGGAGGATAGGGGGTCGTTATCATCCAGAAAAACCCCCTCCTGTTTTGGA‑ATA‑TCCGCATGAACCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGa < 2:1330927/151‑1 (MQ=255) ccGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGa > 2:1406177/1‑150 (MQ=255) gcgcTCGCGCCGCACGGGCCCACCTCACCGCCCCCTTTGCCCTTCATCGGGGAGGATAGGGGGTCGGTATCACCCAGAAAAACCCCCCCCTGTTTGGGA‑ATA‑CCCGCATAAACCGCCACCTCAT‑CCCCCGCCATATCGTGATTAACGAAGt < 2:995188/151‑1 (MQ=255) gcgcTCACGCCGCACAGGCCCAGCTCACCGCCCCCTTTGGCTTTCATGGGGGAGGATATGGGGTCGGTATCATCCAGAAAAATCCCCTCCTGTTTTGGG‑ATA‑TCCGCATGACCCGGCACCTCAT‑CCCCCGCCATATCGTGATTAACGAAGt < 1:1195051/151‑1 (MQ=255) ccgccgcACAGGCCCAGCTCACCGACCCCTTTGGCCTTCATGGGGGAGGATATGGGGTCGGTATCACCCAGGAAAATCCCCTCCTTTTTGGGG‑ATA‑TCCGCATGAACCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCa < 1:1227648/150‑1 (MQ=255) ccgaACAGGCCCAGCCCACCGACCCTTTTGGCCTTCTTCGGGAAGAATAGGGGGTCGATATCATCCAGGAAAATCCCCTCCTTTTTTGGA‑ATC‑TCCGAAAGAACCGGCCCCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAAc < 2:1164510/151‑1 (MQ=255) agaGGCCCAGCTCCCCGACCCCTTTGGCCTTCATCGGGGAGGATATGGGGTGGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑CCCGCATGAACCGGCACCTTAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTc < 1:1215293/149‑1 (MQ=255) acaGGCCCAGCTCCCCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGAAAAATCCCCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCCCCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTc < 1:1263574/151‑1 (MQ=255) ggCCCAGCTCACCGACACCTTTCGCCTTCATCGGGTAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCTCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATc > 2:586779/1‑151 (MQ=255) gCCCAGCTCACCGACCCCTTTGGCCTTCATGGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCCCCTGTTTGGGG‑ATA‑TCCGCATGACCCGGCCCCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATcc < 1:1088370/151‑1 (MQ=255) cccAGCTCACCGACCCTTTTGCCCTTCAGCGGGGAGGATATGGGGTCGGTATCACCCAGAAAAACCCCCTCCTTTTTGGGG‑ATA‑CCCGCATGACCCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCa < 2:1120656/151‑1 (MQ=255) ccAGCTCACCGACCCCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCACCCAGAAAAACCCCCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCAc < 1:1039440/151‑1 (MQ=255) aGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCg > 2:1172748/1‑151 (MQ=255) cccccaacccttttGCCCTTCAGGGGGGAGAATATGGGTTCTATATCACCCAGAAAATTCCCCCCCTTTTTTGGA‑ATA‑CCCGCATGACCCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCa < 2:1050668/140‑1 (MQ=255) cACCGACACCTTGGGCCTTCAGGGGGGAGGATAGGGGGGCGGTACCACCCAGAAAAATCCCCTCCGTTTTGGGG‑ATA‑CCCGCATGACCCGCCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAg < 2:237593/151‑1 (MQ=255) ccGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGct > 2:1133087/1‑151 (MQ=255) gACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGctcc > 2:1434267/1‑151 (MQ=255) cccTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGAAAAATCCCCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCtcctcc < 1:150610/150‑1 (MQ=255) ccTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCtcctcc > 2:454117/1‑150 (MQ=255) ccTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGCCACATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCtcctcc > 1:269839/1‑150 (MQ=255) tttGCCTTTCATCGGGGAGGATATGGGGTCGGTATCACCCAGAAAAACCCCCCCCTTTTTGGGA‑ATA‑CCCGCATGACCCGCCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCa < 2:1157604/149‑1 (MQ=255) ttGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATc > 2:1413710/1‑150 (MQ=255) gggCCTTCTGCGGGGAGGATATGGGTGCGGTATCACCCAGGAAAATCCCCTCCTGTTTGGGG‑ATA‑CCCGCATGAACCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCa < 2:142908/149‑1 (MQ=255) caggggggAGGATAGGGGGTCGGTATCACCCAGAAAAACCCCCCCCTGTTTTGGG‑ATA‑CCCGAATGACCCGGCACCTCAC‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCcgc < 2:233402/146‑1 (MQ=255) cATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCcgcg > 1:1012435/1‑151 (MQ=255) gggagtcattGGGGACGGTATAACCCGGGAAACCCCCCCCCGGTTTT‑GG‑ATAGCCCTAATGAACCGGCCCCTCAG‑GCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccat < 2:1175868/142‑1 (MQ=255) gggAGGATATGGGTTGGAAATCCCCCAGAAAACTCCCCTCCTGTTTGGGC‑ATC‑TCCACATAAACCGCCACCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccat < 2:639232/151‑1 (MQ=255) gggAGGATATGGGGTCGGTATCATCCAGAAAAACCCCCTCCTGTTTTGGG‑ATA‑TCCGCATGACCCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccat < 1:142660/151‑1 (MQ=255) ggcggatggggtgtgggTACCACCCGGGAAACTCCCCCCCCGTTTGGGT‑ATA‑GCCGAACGACCGGGCCCCTCAC‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccatg < 1:106900/136‑1 (MQ=255) ggaTAGGGGGTCGGTATCACCCAGAAAAACCCCCTCCTGTTTTGGG‑ATA‑CCCGCAGAACCCGCCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccatgccc < 1:717853/151‑1 (MQ=255) gaTATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccatgccc > 1:1414554/1‑150 (MQ=255) atatGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccatgcccat > 2:1209039/1‑151 (MQ=255) agggtgTCGGTATCATCGAGAAAAATCCCCCCCTTTTTTGGT‑ATA‑CCCGTATAACCCGCCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATa < 2:862747/145‑1 (MQ=255) tGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGt > 1:544292/1‑151 (MQ=255) ggggTCGGTATCACCCAGAAAAATCCCCCCCTTTTTTGGG‑ATA‑CCCGCATGACCCGGCCCCCCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTc < 2:811901/151‑1 (MQ=255) ggggTCGGTATCACCCAGAAAAACCCCCCCCTGTTTTGGG‑ATA‑CCCGAATGAACCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTc < 2:1462430/151‑1 (MQ=255) gggTCGTTATCACCCAGAAAAATCACCTCCTTTTTTGGG‑ATA‑TCCGCAGGACCGGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCa < 1:925204/151‑1 (MQ=255) gggCCGTTATCACCAAGGAAAACCCCCCCCTTTTTGGGA‑ATA‑CCCGCATGACCCGCCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCa < 2:1045682/151‑1 (MQ=255) gTCGGTATCATCCAGAAAAACCCCCTCCTTTTTTGGG‑ATA‑CCCGCATGAACCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCAtt < 1:884473/151‑1 (MQ=255) cGGTATCATCCAGAAAAATCCCCTCCTGTTTTGGG‑ATA‑CCCGCATGACCCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTg < 1:202534/150‑1 (MQ=255) cGGTATCACCCAGGAAAACCCCCCCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTgc < 1:575586/151‑1 (MQ=255) atcatcCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGcc > 1:1307807/1‑150 (MQ=255) catcCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAAt > 2:414145/1‑151 (MQ=255) cacccAGAAAAACCCCCTCCTTTTTGGGG‑ATA‑CCCGCATAACCCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAAt < 1:695100/148‑1 (MQ=255) ccAGAAAAATCCCCTCCTGTTTTGGG‑ATA‑TCCGCATGACCCGGCACCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGa < 1:997424/150‑1 (MQ=255) ccAGAAAAATCACCTCCTGTTTGGGG‑ATA‑CCCGCATAACCCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGAc < 2:500812/151‑1 (MQ=255) agaaaaaTCCCCTCGTTTTTGGGG‑ATA‑TCCGATTAAACGGCCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCt < 2:885935/148‑1 (MQ=255) gaaaaaTCCCCTCCTGTTTTGGG‑ATA‑TCCGCATGACCCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTg < 1:125212/149‑1 (MQ=255) aaaTCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCt > 1:388822/1‑151 (MQ=255) aaTCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTg > 1:520079/1‑151 (MQ=255) cccctcctTTTTTGGG‑ATA‑TCCGCAGGAACCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTgcgc < 1:1451366/149‑1 (MQ=255) aCCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTgcgcg > 2:756843/1‑151 (MQ=255) cccctTTTTTGGA‑ATA‑CCCCAATAACCCGCCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCa < 2:1207344/149‑1 (MQ=255) cctGTTTTGGG‑ATA‑TCCGCATGAACCGGCCCCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGt < 1:129098/151‑1 (MQ=255) tttttcGGG‑ATT‑TCCGCTTAACCCGGC‑CCTCCTCCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGtt < 1:157594/148‑1 (MQ=255) tttgGGG‑ATA‑CCCGCATGACCCGCCACCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGtttt < 2:368302/150‑1 (MQ=255) tttGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCg > 2:871678/1‑151 (MQ=255) tttGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCg > 2:1361533/1‑151 (MQ=255) ttGGGAATA‑CCCGCATGACCCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTc < 2:308670/150‑1 (MQ=255) tGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCgg > 2:577042/1‑150 (MQ=255) g‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTc > 2:1354714/1‑151 (MQ=255) atcgccaggAACCGGCGCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAgg < 1:1304878/143‑1 (MQ=255) cccccATGACCCGGCACCTAAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAgg < 1:264808/146‑1 (MQ=255) ccGCATGACCCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGAt < 2:532321/151‑1 (MQ=255) cGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATg > 2:1418708/1‑151 (MQ=255) gcaacaaCCGCCACCACAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGc < 1:123669/146‑1 (MQ=255) gCATGACCCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGc < 1:1406172/151‑1 (MQ=255) gAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTcc > 1:1020115/1‑151 (MQ=255) atccggcccttatt‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCt < 1:43688/138‑1 (MQ=255) ccGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTgc < 1:667469/151‑1 (MQ=255) cGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTgc > 2:1368391/1‑150 (MQ=255) gccACCTCAC‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTgcag < 2:858537/149‑1 (MQ=255) cccccTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTgcagc < 2:1276049/148‑1 (MQ=255) ccACCTAAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTgcagc < 2:568498/150‑1 (MQ=255) aCCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTGCAGcac > 1:140213/1‑151 (MQ=255) aT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTGCAGcacacac > 1:1392370/1‑150 (MQ=255) | GTTATACACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGG‑ATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTGCAGCACACAC > NC_000913/298811‑299107 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |