| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 925901 = | 129 (0.990) | 42 (0.330) +C |
29/296 | 7.2 | 27.1% | noncoding (71/88 nt) | serW | tRNA‑Ser |
| ? | NC_000913 | = 1097399 | 99 (0.760) | intergenic (+570/+166) | ycdU/serX | putative inner membrane protein/tRNA‑Ser | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
TCCCTATAGTAGCGCCCCGTTGCCACCCATGAGGTTTGGTAGCAAAACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTT‑CGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/926024‑925901‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGC < NC_000913/1097399‑1097252 | cCCCTATAGTGGCCCCCCGTTGCCACCCATGGGGTTTGGTAGAAAAAAAATTGGGTGGGGTGTCCGGGTGGCGGAAGGAGCACGCCTGGAAAGTGTTTATACGGAAACGTATCGGGGGTG‑CGAACCCCCCCCTCACCGCCATATTTAAAGA < 3:86431/150‑1 CCTATAGTAGCGCCCGGTTGCCCCCCAGGAGGTTGGGAAGAAAAACAATTTGGTGGGGTGCCCGGGTGGCTGAAGGAGCCCGCCGGGAAGGTGTGTATACGGAAACGTATCGGGGGTT‑CGAACCCCCCCCTCACCGCCATATTTAAAGAAG < 2:261302/151‑1 ATAGTAGCGCCCCGTTGCCCCCCATGAGGTTTGGTAGCAAAACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTT‑CGACCCCCCCCCTCACCGCCATATTTAAAGAAGAG < 2:686516/150‑1 ccCCCCGTTCCCCCCCATGAGGTTTGGTAGCAAAACAATTGGGGGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGAAAAGTGTGTATCCGGCAACGTATCGGGGGTT‑CGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACG < 2:1193611/149‑1 CGCCCCGTTGCCACCCATGAGGTTTGGTAGAAAAACAATTTGGTGAGGTGTCCGGGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTT‑CGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACG < 1:204446/151‑1 CCCCGTTGCCACCCAGGGGGTTTGGAAGAAAAACATTTTGGTGAGGTGCCCGAGTGGCTGAAGGAGCCCCCCTGAAAAGTGTTTATACGGCAACGTATGGGGGTTT‑CGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAA < 2:1194647/151‑1 CCCCGTGGCCACCCAGGAGGTTTGGTAGAAAAAAATTTTGGTGGGGTGTCCGGGTGGCTGAGGGAGCCCGCCTGGAAAGGGTGTATACGGCAACGTATCGGGGGTT‑CGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAA < 2:1362792/151‑1 CCGTTGCCCCCAATGGGGTTTGGTAGAAAAAAATTTTGGTGGGGTGCCGGAGTGGCTGAAGGAGCACGCCGGAAAAGTGTGTATACGGCAACGTATCGGGGGTT‑CAAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAG < 1:380752/151‑1 acgaaAATTTGGTGAGGTGCCCGAGTGGCTGAAGGAGCACGCCTGAAAAGTGTGTATACGGCAACGTATGGGGGTTT‑CGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCAC < 2:1404443/146‑1 aaaAATTGGGGGGGGTGCCCGGGGGGCTGAAGGAGCACCCCTGGAAAGTGTGTATACGGAAACGTAGGGGGGGTG‑CAAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACAC < 3:231324/148‑1 AACAATTGGGTGGGGTGCCGGGGTGGCTGAAGGAGCCCCCGTGAAAAGTGTATATGCGGCAACGTATGGGGGTTT‑CGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACAC < 3:133827/151‑1 aaAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCGGGAAAGTGTGTATACGGCAACGTATCGGGGGTT‑CAAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACAC < 1:329315/148‑1 tgggggGGTGTCCGGGGGGCTGAAGGAGCCCGCCGGGAAATTGTGTATACGGCAACTTAGGGGGGGTT‑CAAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGG < 1:538589/145‑1 gggGTCCGAGGGGCTGAGGGAGCCCGCCTGGAAAGTGTGTATACGGAAAGGTATGGGGGGTT‑CGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATG < 3:195344/147‑1 GTGCCCGAGGGGCTGAAGGAGCACGCAGGGAAAGTGTGTTTACGCCAACGTTTGGGGGGTT‑GGACCCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAG < 2:1400651/151‑1 gccgggGTGGCGGAAGGAGCCCGCCTGGAAGGTGTGAATACGGAAACGTATCGGGGGTT‑CGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAA < 4:73393/145‑1 GTCGGAGTGGCTGAAGGAGCCCGCCGGGAAAGTGTGTATACGGCAACGTATGGGGGGTT‑CGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGA < 4:289507/150‑1 cccggggGGCGGAAGGAGCCCGCCGGGAAAGTGTGTATACGGCAACGTATCGGGGGTC‑CGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAG < 2:1027461/144‑1 cgGAAGGAGCACGCCGGAAAGGTTGGTATGCGACAAGGTAGGGGGGGTT‑CCACCCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGAta < 3:289427/148‑3 gggccCGCCTGGAAAGTGTGTATCCGGCAACGTAGCGGGGGTT‑CGACCCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTC < 4:1221521/146‑1 ccCGCCGGAAAAGTGTGTATACGGAAACGTATGGGGGGTT‑CAAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGAC < 2:894451/149‑1 cgGGAAGGGGTGTAAACGGAAACGTAGGGGGGTTG‑CGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTG < 4:1301933/149‑1 AAGTGTGTATACGGCAACGTATGGGGGTTT‑CGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGAC < 2:34309/151‑1 GTGTGTATACGGCAACGTGTGGGGGGTT‑CGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAG < 2:1418808/151‑1 GTATAGGGAACCGTAGGGGGGGTT‑CAACCCCCCCCCCCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAG < 4:1354866/151‑1 GTATACGGCAACGTATGGGGGGTT‑CGAACCCCCCCCTCCCCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCA < 4:379730/150‑1 aAACGTATGGGGGGTT‑CGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAG < 1:229529/150‑1 ggcgagggaGGGGTT‑TCAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAG < 1:4987/141‑1 aggGGGGGTT‑CAACCCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGT < 4:44569/147‑1 ATCGGGGTTT‑CGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGT < 2:590459/150‑1 atGGGGGTTCCGAACCCCCCCCTACCCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGT < 2:344679/148‑1 gGGGGGTC‑CAAACCCCCCCCTCCCCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGA < 4:1346853/149‑1 GGGTTT‑CGACCCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAAC < 3:22044/150‑1 gtTT‑CGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGC < 1:482118/148‑1 ggtttcaacCCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGC < 2:1240094/142‑1 gagagtaAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAAC < 3:20156/142‑1 GGTT‑CAAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGC < 1:63906/150‑1 gtttcaacCCCCCCCCCCCCCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGC < 1:418255/142‑1 GTT‑CAAACCCCCCCCCCGCCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAG < 2:229802/151‑1 ttcaacCCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAG < 4:35833/144‑1 gcccAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAG < 1:568832/146‑1 gtaAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTG < 2:640035/148‑1 caAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTG < 2:303232/148‑1 CGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTG < 2:273684/150‑1 atCCCCCCCCCCCCCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGC < 4:955195/149‑1 acCCCCCCCCTCCCCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAG < 3:244404/148‑1 ACCCCCCCCACCCCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGA < 2:26382/148‑1 | TCCCTATAGTAGCGCCCCGTTGCCACCCATGAGGTTTGGTAGCAAAACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTT‑CGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/926024‑925901‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGC < NC_000913/1097399‑1097252 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |