| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 213,341 | 0 | A | G | 43.8% | 125.1 / 32.4 | 90 | G337G (GGA→GGG) | tilS | tRNA(Ile)‑lysidine synthetase |
| Reads supporting (aligned to +/- strand): ref base A (13/37); new base G (39/0); total (53/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.46e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTC‑GGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCC > NC_000913/213193‑213490 | aTGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGT‑GGGGAg > 3:484184/1‑151 (MQ=255)aTGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAg < 2:153110/151‑1 (MQ=255) tCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTAc < 1:268664/151‑1 (MQ=255) tCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTAc < 1:508326/151‑1 (MQ=255) cACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGT‑GGGGAGGGTAc > 4:501202/1‑150 (MQ=255) cACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTAc < 2:1331886/150‑1 (MQ=255) cACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACa < 4:788839/151‑1 (MQ=255) tGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGGACAGCtt > 2:22164/1‑150 (MQ=255) gTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGT‑GGGGAGTGTACAGCTTaa > 3:308218/1‑151 (MQ=255) gTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTa < 2:971966/150‑1 (MQ=255) gTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTa < 4:867599/150‑1 (MQ=255) ttACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAAt < 4:861648/150‑1 (MQ=255) tACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGTGTACAACTTAATGc > 2:878492/1‑151 (MQ=255) tACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATg < 2:1028748/150‑1 (MQ=255) gTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGGGTACAGCTTAATGCggg > 2:1113385/1‑151 (MQ=255) ttGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGAGGACAGCTTAATGCggggg > 2:841739/1‑149 (MQ=255) tGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGGGGACAGCTTAATACgggggg > 2:902291/1‑151 (MQ=255) gggCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAgg < 2:144979/150‑1 (MQ=255) cgcgTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGat < 4:1192634/151‑1 (MQ=255) tGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCG‑GGGGAGGGGAAAGCTTAAATCGGGAGGGGGTAATCGc > 4:491811/1‑151 (MQ=255) gAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGGGTACAGCTTAATGCGGGGGGGGGTATTTGcc > 2:2830/1‑151 (MQ=255) gAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGc < 2:281802/150‑1 (MQ=255) aaaTCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGccc < 4:93243/151‑1 (MQ=255) aaTCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGT‑GGGGAGTGGAGCACTTAATGAGGGAGGGGGTATTCccccc > 4:1269550/1‑150 (MQ=255) ccGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGG‑GGGGAGGGTGAAGCTTAAAGCGGGGGGCGATATTTGccccccc > 4:1019519/1‑150 (MQ=255) cGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGGGGAAAGCTTTATGCGGGGGGGGGTATTCGCGCTCcccggg > 4:524615/1‑149 (MQ=255) cTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGTGTACAGCTTTATACGGGAGGGGGTATTCGCCCTCCGCGTGc > 4:452734/1‑150 (MQ=255) tATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGGGGACAGCTTAATTCGGGAGGCGATATTCTCCCCCCCCGTGc > 4:554147/1‑149 (MQ=255) aTCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCa < 4:967777/149‑1 (MQ=255) aaaGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGAc < 2:947861/149‑1 (MQ=255) aGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGa < 4:956412/151‑1 (MQ=255) gTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGaa > 1:260925/1‑151 (MQ=255) gTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCC‑TGGCGGAGGGCGGCTTCATGGGGGAGGGGATTTTTGTCCTCCGGGTGCCGAcaga > 1:539874/1‑148 (MQ=255) aCTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGT‑GGGGAGTGGACAGCTTAAAGCGGGGGGGGATATTTGCCCCCCCCGGGCAGACGAAGCgggc > 4:144335/1‑149 (MQ=255) gtggtgGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAg < 4:1256139/150‑1 (MQ=255) tggATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGT‑GGGGAGGGGACAGCTTAATGCGGGGGGGGATATTTGCCCTCCGCGTGCAGACGAAGCGGGCAgcgtgg > 2:578864/1‑150 (MQ=255) ggATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAgcgtgcg < 4:384521/151‑1 (MQ=255) ggATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAgcgtgc < 2:1114818/150‑1 (MQ=255) gATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAgcgtgcgt < 2:801475/151‑1 (MQ=255) aTTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGTGTACAGCTTAATGCGGGGGGCGGTATTCGCCCTCCCCGTGCAGACGAAGCGGGCAgcgggcggt > 2:1060323/1‑149 (MQ=255) ttAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGC‑GGGGAGTGTACAGCTTAATGCGGGGGGCGGTATTTGCCCTCCGCGGGCAGACGAAGCGGGCAGCGGGCGgtt > 4:1429940/1‑151 (MQ=255) tAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCC‑GGGGAGGGTACAGTTTAATGCGGGTGGCGGAATTCGCCCTCCGCGCGCAGACGAAACgggtaacggggggttt > 4:287253/1‑137 (MQ=255) tAAATCCGTCACCGGGCAAAGCGAAAACATTGTGACGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGGAACGGAATAG‑TTAAATCGGGTGGGGGTATTTAGCCTCAGGCTGCAGACGAAGCgggctcggagcggttc > 2:374536/1‑137 (MQ=255) aaaTCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGTGTACAGCTTAATGCGGGGGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGGCAGCGTGCGTTTc > 2:1237842/1‑150 (MQ=255) aaaTCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGTGGACAGCTTAATGCGGGAGGCGATATTTGCCCTCCGCGTGCAGACGAAGCGGGCCGCGGGCGtttt > 2:801293/1‑149 (MQ=255) aaaTCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCa < 2:766877/151‑1 (MQ=255) aaTCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCaa < 4:420081/151‑1 (MQ=255) aTCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGTGTACAGCTTAATTCGGGAGGCGATATTCGCCCTCCGCGGGCAGACGAAGCGGGCCGCGGGCGTTTCaaa > 1:568316/1‑151 (MQ=255) aTCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCCCCTGCAGACGAAGCGGTCAGCGGGCGGTTCaa > 2:1311411/1‑150 (MQ=255) tCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGGGTACAGCTTAATGCGGGAGGCGATATTTGCCCTCCCCGTGCAGACGAAACGGTCAGCGGGCGGTTCAAAACGcc > 4:381454/1‑151 (MQ=255) ccGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGTGTACAGCTTAATGCGGGAGGCGATATTCCCCCTCCCCGTGCAGACGAAGCGGTCAGCGTGCGGTTTAAAACGCCCgg > 2:1326153/1‑151 (MQ=255) ccGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAgg < 4:1193114/151‑1 (MQ=255) gggCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGGCAGCGGGCGGTTCAAAACGCCAGGAt > 2:706193/1‑151 (MQ=255) ggCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGAtt < 4:319268/151‑1 (MQ=255) cAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGGCAGCGTGCGGTTCAAAACGCCAGGGTtgc > 2:656098/1‑151 (MQ=255) aGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGGT‑GGGGAGTGTACAGATTAATGGGGGGGGGGGTATTTGCCCTCCGCGTGCAGACGGAACGGGCCGCGGGCGGTTTAAAACGCCCGGATtgctgg > 2:1435078/1‑150 (MQ=255) aaaaCATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCatat < 3:275283/151‑1 (MQ=255) aaaaCATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCatat < 2:580679/151‑1 (MQ=255) aaaCATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATAtt < 4:194253/151‑1 (MQ=255) aaCATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCC‑GGGGAGGGGACAGCTTAAAGCGGGGGGCGATATTCGCCCCCCGCGTGCAGACGAAGCGGGCAGCGTGCGGTTCCAAGCGCCACGATTGCTGCCTAttt > 4:1431149/1‑150 (MQ=255) aCATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGTCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGAATATTGt < 3:137046/151‑1 (MQ=255) aCATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGGACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGGGCAGACGAAGCGGGCAGCGGGCGGTTCAAAGCGCCAGGGTTGCTGCATATTGt > 1:159636/1‑151 (MQ=255) gCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTC‑GGGCGt < 2:1402605/151‑1 (MQ=255) gTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGTGTACAGCCTAATGCGGGAGGCGATATTCCCCCCCCGCGTGCAGACGAAGCGGTCAGCGTGCGGTTCAAAACGCCAGGATTGCTGCATATTGTC‑GGGCGGAAc > 2:1431651/1‑151 (MQ=255) gTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGGGGACAGCTTAAAGCGGGGGGCGATATTTGCCCTCCGCGTGCAGACGAAGCGGTCAGCGGGCGGTTCAAAGCGCCAGGATTGCTGCATATTTTC‑ggggggaa > 4:504477/1‑145 (MQ=255) ggCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGTGTACAGCTTAATTCGGGAGGGGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGGGGGGTTTAAAACGCCAGGATTGCTGCATATTGTC‑GGGCGGAAcgg > 2:1055133/1‑151 (MQ=255) ggCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGGGTACAGCTTAATGCGGGAGGCGGTATTCGCCCCCCGCGTGCAGACGAAGCGGGCAGCGTGCGTTTCAAAACGCCCGGGTTGCTGCATATTTTC‑GGGCGGAAcgg > 2:520873/1‑151 (MQ=255) ggCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGCGGT‑GGGGAGTGGACAGATTAATGAGGGGGGGGGGATTTGCCCCCCGCCGGGCGACGAAACGGGGAGCGGGGGGTTCAAAGCGCCCGGATTGGTTCCTATTGTC‑CGGCGTAAcgg > 4:877320/1‑151 (MQ=255) gCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTC‑GGGCGTAAcggc < 2:1366491/151‑1 (MQ=255) aGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGTGGACAGCTTAATGCGGGGGGGGGTATTTGCCCTCCCCGTGCAGACGAAGCGGGCAGCGGGCGGTTTAAAACGCCAGGAGTGGTGCATATTGTC‑GGGCGGAAaggcgg > 4:1301942/1‑151 (MQ=255) aGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGGGGACAGCCTAATGCGGGGGGGGGTATTTGCCCTCCCCGTGCCGACGAAGCGGGGAGCGGGCGGTTCAAAACGCCAGGATTGCTGCATATTGTC‑GGGCGTAAaggcgg > 4:179182/1‑151 (MQ=255) cGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGGGGACAGAGTAAAACCGGGGGGGATATTTGACCCCCCCGCGCCGGCGGAACGGGCAGAGCGCGTTTCCAAACGCCCGGATTGCTGCATATTGTA‑GGGGGTAACGGGGGGCg > 4:1392904/1‑151 (MQ=255) gTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTC‑GGGCGTAACGGCGGACGt < 4:296420/151‑1 (MQ=255) ggCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTC‑GGGCGTAACGGCGGACGTa < 2:813179/150‑1 (MQ=255) gCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGTGTACAGCTTAATGCGGGGGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGGGCGTTTCAAAACGCCCGGGTTGCTGCATATTTTC‑GGGGGGAACGGCGGGCGGAAg > 3:461998/1‑151 (MQ=255) gCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTC‑GGGCGTAACGGCGGACGTAAg < 2:165351/151‑1 (MQ=255) tCAACCGCTGGAATTACCGGCGGGGCT‑GGGGAGGGTAAAGCTTAATTCGGGGGGCGATATTTGCCCTCCCCGTGCAGACGAAGCGGTCCGCGGGCGTTTCAAAACGCCAGGATTGGTGCATATTGTC‑GGGCGTAACGGGGGACGTAAGCtt > 2:1233633/1‑150 (MQ=255) tCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCCCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGGTTCAAAGCGCCAGGATTGCTGCATATTGTC‑GGGCGTAACGGCGGGCGTAAggt > 2:1402513/1‑148 (MQ=255) tGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTC‑GGGCGTAACGGCGGACGTAAGCTAAAGAAAAt < 1:263826/151‑1 (MQ=255) ggAATTACCGGCGGGGCT‑GGGGAGTGGAAAGCTTAATGCGGGGGGGGATATTCGCCCTCCCCGTGCAGACGAAGCGGTCAGCGGGCGGTTCAAAACCCCCGGATTGCTGCATATTTTCGGGGGGCAACGG‑GGGCGTAAGGTAAAAAAAAtt > 4:237275/1‑150 (MQ=255) aTTACCGGCGGGGGT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCCCCGCGGGCAGACGAAGCGGTCAGCGTGCGGTTTAAAGCGCCAGGATTGCTGCATAATTTC‑GGGCGTAACGGCGGGCGGAAGCTAAAAAAAATCTgg > 4:1013686/1‑151 (MQ=255) cggGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTC‑GGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCt > 4:276911/1‑151 (MQ=255) ggggCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTC‑GGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTg < 2:491807/151‑1 (MQ=255) cT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTC‑GGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCg > 4:477660/1‑151 (MQ=255) cT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTC‑GGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCg < 3:42908/151‑1 (MQ=255) t‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGGTTCAAAGCGCCAGGATTGCTGCATATTGTC‑GGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCgg > 2:1152100/1‑150 (MQ=255) gAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTC‑GGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTgcc < 4:1326152/151‑1 (MQ=255) gAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTC‑GGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTgcc > 4:1239778/1‑151 (MQ=255) gAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTC‑GGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTgcc > 4:1032407/1‑151 (MQ=255) gAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTC‑GGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTgc > 1:526413/1‑150 (MQ=255) | ATGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCT‑GGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTC‑GGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCC > NC_000913/213193‑213490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |