| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,603,342 | 0 | A | C | 45.3% | 133.8 / 113.4 | 117 | T509P (ACC→CCC) | hyfB | hydrogenase 4, membrane subunit |
| Reads supporting (aligned to +/- strand): ref base A (60/4); new base C (0/53); total (60/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.40e-29 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 117 total aligned reads displayed.
GCGCAGTACACACGCTGAAGAGGCACAGGAAGTGCCAAATACGATGATCGTCGCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGCCTTTACTGGCTGTGGTGTCGTTCGCGCCGCGC > NC_000913/2603194‑2603487 | gcgcAGTACACACGCTGAAGAGGCACAGGAAGTGCCAAATACGATGATCGTCGCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATAc < 3:267302/150‑1 (MQ=255) gTACACACGCTGAAGAGGCACAGGAAGTGCCAAATACGATGATCGTCGCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTcc < 2:1111378/151‑1 (MQ=255) gTACACACGCTGAAGAGGCACAGGAAGTGCCAAATACGATGATCGTCGCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTc > 3:242472/1‑150 (MQ=255) cacGCTGAAGAGGCACAGGAAGTGCCAAATACGATGATCGTCGCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGcc > 4:1427402/1‑150 (MQ=255) acGCTGAAGAGGCACAGGAAGTGCCAAATACGATGATCGTCGCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCa > 1:71060/1‑150 (MQ=255) acGCTGAAGAGGCACAGGAAGTGCCAAATACGATGATCGTCGCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCAc < 1:104616/151‑1 (MQ=255) cGCTGAAGAGGCACAGGAAGTGCCAAATACGATGATCGTCGCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCa > 1:313884/1‑149 (MQ=255) cGCTGAAGAGGCACAGGAAGTGCCAAATACGATGATCGTCGCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCa > 1:329409/1‑149 (MQ=255) cGCTGAAGAGGCACAGGAAGTGCCAAATACGATGATCGTCGCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCa > 3:143251/1‑149 (MQ=255) gCTGAAGAGGCACAGGAAGTGCCAAATACGATGATCGTCGCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTg > 4:718873/1‑151 (MQ=255) cTGAAGAGGCACAGGAAGTGCCAAATACGATGATCGTCGCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCa > 3:200477/1‑147 (MQ=255) cTGAAGAGGCACAGGAAGTGCCAAATACGATGATCGTCGCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGt > 2:213479/1‑151 (MQ=255) gAAGAGGCACAGGAAGTGCCAAATACGATGATCGTCGCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCg > 3:461374/1‑151 (MQ=255) agGCACAGGAAGTGCCAAATACGATGATCGTCGCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGcc > 2:88620/1‑149 (MQ=255) aGGAAGCGCAAAATACGTTGTTCGTCGCCATCCTCTCCCCCGCGGCCTTTTGCTTATTATTTGCGTTTCGTCCCAGTT‑GG‑CTGCCAC‑CG‑AAGATAATCAATATTG‑CCA‑TTGTTTTCACCAATCCCCCTCCCGCCACTGTCGCCAGCGGAAt < 4:110575/151‑1 (MQ=255) tGCCAAATACTATGATCGCCCCCATGCTCCTCCTCGCGGCACTCTGCTTATTAATTGCGCTTAGTCCCGTTT‑GG‑CTGGCAC‑CG‑AAGATAATCAATTTTG‑CCT‑ATGCTTTAACCAATCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCAc < 1:510305/150‑1 (MQ=255) aaaaTACGTTGATCGTCGCCTTGCTTCTGCCCGCGCCCCTCTGCTTATTATTTGCGTTTAGTGCCGGTT‑GG‑CGGCCCC‑AA‑AAGATAATGCATTTTC‑CCC‑TTGTTTTTACAAATCCCCCCCCCGCCACTGTCGCCAGCGGAATAGCACTTGt < 2:140023/150‑1 (MQ=255) aaaTAAGATGATCGTCGCCTTGCTCCCGCTCGCGCCTCTTGGTGTATAATTTCCTATAAGGCCTAGTT‑GC‑CGGCCAC‑AG‑AAGAAAATGCATATCG‑CCC‑ATGTTTTTACCAACCCCCCCCCCGCCACTGTCGCCAGCGGAATAGCACTTGTa < 2:422037/151‑1 (MQ=255) aTACGATGATCGTCGCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTAcc > 2:111216/1‑151 (MQ=255) tatgttgacCGCCGCCTTTCTCCTCCTCGCGCCTCTCTGATTATTATTTGCGTTTAGGGCCGGTT‑GG‑CTGCCAC‑AA‑AAAATAATGAATATTC‑CCC‑ATGCTTTTCCCAACCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTAccc < 3:444338/146‑1 (MQ=255) tACGATGATCGCCGCCATGCTCCTGCTCGCGGCACTCTGCGTTTTAATTGCGTTTAGTGCCAGTG‑GG‑CTGGCAC‑CA‑AAAATAATGCATATTG‑CCC‑ATGCTTTTACCAATCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTAccc < 1:128738/151‑1 (MQ=255) aCGATGTTCGTCCCCATGCTCCTGCCCGCGGCACTGTGTGTATTATTTGCGTTTGGTGCCATTT‑GG‑GGGGCAC‑GA‑AAAATAACACAT‑TTG‑CCCTATGTGTTTCCCACCCCCCCCCCCGCCACTGTCGCCAGCGGAATAGCACTTGTAccc < 4:898411/150‑1 (MQ=255) aCGATGATCGTCGCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCg > 2:570492/1‑151 (MQ=255) aCGATGATCCCCGCTATCCTCCTGCCCGCGCCACTCTGCGTATTACTTGCGCTTGGTGCCAGTG‑GG‑GTGGCCC‑GA‑AAAATAAGGCATATCC‑CCC‑TTCCTTTACCCATTCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTAccc < 2:764162/150‑1 (MQ=255) gatgatCGTCGCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTCAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGc > 4:105117/1‑151 (MQ=255) gtccgtccCCTTTCTTCTGCCCGCGGCCCTTTGTTTATTATTTGCTTTTAGTGCTGTTG‑GG‑CTGGCAC‑CA‑AAAATAATGCTTTTTC‑CCC‑TTGCTTTTCCCAATCCCCCCCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCAc < 2:1058485/147‑1 (MQ=255) atCGCCCCCATGCTCCTGCCCGCGCCCCTCTGCGTATTAATTGCGTTTGGTGCCTGTG‑GG‑CTGGCAC‑AA‑AAGAAAATGAATATTC‑CCC‑ATGCGTTTACCAATCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGt < 2:847003/151‑1 (MQ=255) tcgtcgCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGtt > 2:274343/1‑151 (MQ=255) ccgCCTTGCTCCTCCCCGCGGCACTCTGTTTATTATTTGCTTTTGGTCCCGGTT‑GG‑CGGCCAC‑AA‑AAAAAAATGAATTTCC‑CCC‑TTGCTTTCACCACCCCCCCCCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCa < 4:1320312/150‑1 (MQ=255) cgCCATGCTCCTGCCCGCGCCCCTCTGCTTTTTAATTGCTTTTGGTCCATGTT‑GG‑CGGCCCC‑CA‑AAGAAAATGTTTTTTC‑CCC‑ATGCTTTTCCCATTCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCAt < 2:212820/151‑1 (MQ=255) cgCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCAt > 2:1387853/1‑151 (MQ=255) ccccATTCTCCTGCGCGCGCCTCTCTGCGTATTCTTTTCCTTTAGTGCTGGTT‑GG‑TCGGCAC‑GA‑AAAAAAATCAATATTC‑CCC‑TTTCTTTTCCCAACCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCa < 2:712541/148‑1 (MQ=255) ccgtcctccTGCGCGCGCCCCTCGGTGTATTATTGGCGTTTGGTGCCGGTG‑GG‑CTGCCCC‑AG‑AAAATAATGCATATTC‑CCC‑TTGTTTTTCCCAACCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATac < 3:465658/143‑1 (MQ=255) ccATGCTCCTGCCCGCGGCCCTTTGCTTATTAATTGCGTTTAGTCCGGGTG‑GG‑CGGGCAC‑CA‑AAAATAATGCATTTTC‑CCC‑TTGCTTTAACAAACCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATac < 1:383940/151‑1 (MQ=255) ctGCTACTGCTCGCGGCACTCTGCTTTTTATTTGCGTTTAGTGCCTGTG‑GG‑CGGCCAC‑CA‑AAAAAAATGCATATCG‑CCC‑GTGTTTTTCCCAACCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATacac < 3:557465/150‑1 (MQ=255) aTGCTCCTGCCCGCGGCCCTCTGCTTATTAATTGCGTTTAGTGCATGTT‑GG‑CTGCCAC‑GA‑AAGAAAATGCATATTC‑CCC‑TTGTTTTAACCAACCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATacac < 1:501751/151‑1 (MQ=255) aTGCTCCTGCCCGCGGCCCTCTGCGTATTAATTGCGTTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAAATAATGCATATTG‑CCC‑ATGCTTTTACCAATCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATacac < 1:391208/151‑1 (MQ=255) aTGCTCCTGCCCGCGGCACTCTGCTTATTAATTGCGTTTAGTGCCGGTT‑GG‑CGGGCAC‑AG‑AAGATAATGCATTTTC‑CCC‑ATGCTTTTCCCAACCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATacac < 2:1192005/151‑1 (MQ=255) aTGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATaca > 3:473550/1‑150 (MQ=255) tcctcctccccgcgACCCTCTGAGTATTAATTCCGAGTATTGCTTG‑T‑GG‑CCGCCACGCA‑AAAATAAGGATTATTC‑CCC‑TTGCTTTTACAAACCCCCCCCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATaca < 4:1312901/139‑1 (MQ=255) tGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATacac > 4:708587/1‑150 (MQ=255) tGCAACTGCTCGCGCCATTCTTCTTTTTATTTGCGTTTAGTGCTGTTT‑GG‑C‑GGCCC‑CGAAAGAAAAGTCTTATTG‑CGC‑ATGCTTTAACACACCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATacac < 4:274137/150‑1 (MQ=255) ggctccggCTCGCGGCCCTCTGCTTATTATTGGCGTTTAGTGCAGGTT‑GG‑CTGGCAC‑CA‑AAGAAAATGCATATTG‑CCC‑AGGTTTATACAAACCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATacac < 1:64239/143‑1 (MQ=255) gCTACTGCTCGCGGGACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATacac > 4:832666/1‑149 (MQ=255) cTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAgg > 2:1346561/1‑151 (MQ=255) cTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAgg > 1:338759/1‑151 (MQ=255) ccggcccgcgGCTCTCTGTTTATTAATTGCTTTTAGTGCCGGTG‑GG‑CGGCCAC‑AG‑AAAATAATCCATTTTC‑CCC‑TTGTTTTTCCCAATCCCCCCCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTc < 4:1121273/145‑1 (MQ=255) ccTGCCCGCGCCATTCTTTTTATTATTTCCGTTTAGTGCAGTTT‑GG‑CGGCCAC‑GA‑AAAAAAATG‑ATTTTGCCCC‑ATGTTTTTACCACCCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTc < 3:77891/150‑1 (MQ=255) gcgcgcgGCTCTCTGTTTATTAATTGCGCTTGGTGCGGTTT‑GG‑CGGGCAC‑CA‑AAAATATTGATTATCC‑CCC‑TTGCTTTTACCAATCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCa < 4:117817/146‑1 (MQ=255) cgcgGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCAccccc > 4:1342178/1‑151 (MQ=255) ggcccctctGTGTATTATTGGCG‑TTTGGGCCGGTTGGG‑CGGCCCC‑CA‑AAGATAATATATTTTC‑CCC‑TTGCTTTTCCCAACCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTc < 2:1027592/146‑1 (MQ=255) cattttgtttATTAATTGCGTTTAGTG‑CGGTT‑GGCCTGGCAC‑CA‑AAAATAATCCATTTTC‑CCC‑TGGCGTTTCCAAACCCCCCCCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCAtt < 4:25441/142‑1 (MQ=255) aCTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCAtt > 2:649888/1‑150 (MQ=255) ctctGTGTATAATTTGCGTTGGGTCCTGGTG‑GG‑CGGGCAC‑CA‑AAGATAATGCTTATTC‑CCC‑TTGCTTTTACCATCCCCCCCCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTAc < 1:352929/151‑1 (MQ=255) ctctGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTAc > 4:1304031/1‑151 (MQ=255) tgtttataatttGCGTTTTGTGCGTGTG‑GG‑CTGCCAC‑GA‑AAAATAATGTATATCC‑CCC‑TTGCTTTACCCTACCCCCCCCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGt < 3:462129/141‑1 (MQ=255) tgtgTATTATTGGCTCTTGGTCCTTGTT‑GG‑CTGCCAC‑CA‑AAAATAATGCATATTC‑CCC‑TTGTTTTTCCCAACCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGt < 3:387918/148‑1 (MQ=255) gcttataagttGCGTTTCGTGCAAGTG‑GG‑CTGGCAC‑AA‑AAAATAATGCATTTCC‑CCC‑TTGCTTTTACCACCCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACt < 4:1370157/139‑1 (MQ=255) gCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGtt > 3:348814/1‑151 (MQ=255) gCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGtt > 1:333517/1‑151 (MQ=255) gCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTCTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGtt > 1:191775/1‑151 (MQ=255) gTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGc > 4:1022204/1‑151 (MQ=255) aTTAATTGCGTTTAGTGCCGGTT‑GG‑CTGGCAC‑CA‑AAGATAATGCATATTC‑CCC‑ATGCTTTTACCAATCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCt < 2:643087/150‑1 (MQ=255) aTTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTg > 2:252475/1‑151 (MQ=255) aaTTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGtt > 4:865897/1‑150 (MQ=255) aaTTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGtt > 2:411428/1‑150 (MQ=255) aTTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTta > 3:146127/1‑150 (MQ=255) tgcgttgggTGCCATGT‑GG‑CTGGCAC‑CA‑AAGATAATGAATATTC‑CCC‑TTGCGTTTACCAACCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTtacta < 1:2080/143‑1 (MQ=255) cttttAGTGCCAGTT‑GG‑CTGGCCC‑CA‑AAAAAAATGCATATTG‑CCC‑ATGCTTTTACCAATCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTtactac < 1:563219/147‑1 (MQ=255) gcTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTg > 4:608451/1‑151 (MQ=255) cgtttggtccgggtggg‑ctggcAC‑CA‑AAGATAATGCATATTC‑CCC‑ATGCTTTTACCAACCCCCCCCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTactact < 1:242474/136‑1 (MQ=255) cTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTgg > 4:1390373/1‑151 (MQ=255) ttAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGc > 2:1038789/1‑151 (MQ=255) aGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCg > 2:1057028/1‑150 (MQ=255) gggcAC‑CG‑AAAATAATGTATATTG‑CCC‑ATGCTTTTACCACCCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGcc < 4:498428/150‑1 (MQ=255) ggcAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCt > 4:917660/1‑151 (MQ=255) ggcAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCt > 2:958998/1‑151 (MQ=255) ggcAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCt > 2:911711/1‑151 (MQ=255) gcAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTg > 4:801461/1‑151 (MQ=255) gcAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTg > 2:286274/1‑151 (MQ=255) c‑cG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGcc > 4:729392/1‑151 (MQ=255) c‑cG‑AAGATAATGCATATTC‑CCC‑ATGCTTTTCCCAATCCCCCCCCCGCCTCTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGcc < 1:185965/151‑1 (MQ=255) c‑cG‑AAAATAATGCATATTG‑CCC‑ATGCTTTTCCAAACCCCCCCCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGcc < 2:1359964/151‑1 (MQ=255) g‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCTCTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGCCtt > 4:32816/1‑151 (MQ=255) aaTAATGCATTTCC‑CCC‑AGGCTTTTACCAATCCCCCCCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGCCTTTAc < 2:281629/150‑1 (MQ=255) tAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGCCTTTACTg > 4:1073422/1‑151 (MQ=255) aTGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGCCTTTACTGGc > 2:1107575/1‑151 (MQ=255) gtattttcccc‑ATGCTTTTCCCAACCCCCCCCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGCCTTTACTGGCt < 2:111905/142‑1 (MQ=255) ttG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGCCTTTACTGGCTgtggtg > 1:561028/1‑151 (MQ=255) ttG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGCCTTTACTGGCTgtggtg > 3:373368/1‑151 (MQ=255) cg‑CCC‑CTGCGTTAACCACCCCCCCCCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGCCTTTACTGGCTGTGgtgt < 3:332401/150‑1 (MQ=255) cccctgtGCTTTTACCCCTCCCCCCCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGCCTTTACTGGCTGTGgtgt < 3:332393/145‑1 (MQ=255) tgtttttACAAACCCCCCCCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGCCTTTACTGGCTGTGGTGTCGTTc < 4:88622/146‑1 (MQ=255) tGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGCCTTTACTGGCTGTGGTGTCGTTcg > 1:317624/1‑151 (MQ=255) gtttttACCAACCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGCCTTTACTGGCTGTGGTGTCGTTcg < 2:806417/147‑1 (MQ=255) gCGTTTCCCACCCCCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGCCTTTACTGGCTGTGGTGTCGTTcg < 4:1228055/150‑1 (MQ=255) gCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGCC‑TTACTGGCTGTGGTGTCGTTcgcg > 1:513044/1‑151 (MQ=255) tttACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGCCTTTACTGGCTGTGGTGTCGTTcgcgc > 1:542725/1‑150 (MQ=255) ttACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGCCTTTACTGGCTGTGGTGTCGTTcgcgccg > 4:1296390/1‑151 (MQ=255) aaTACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGCCTTTACTGGCTGTGGTGTCGTTcgcgccgcgc > 2:1360048/1‑149 (MQ=255) | GCGCAGTACACACGCTGAAGAGGCACAGGAAGTGCCAAATACGATGATCGTCGCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTT‑GG‑CTGGCAC‑CG‑AAGATAATGCATATTG‑CCC‑ATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGCCTTTACTGGCTGTGGTGTCGTTCGCGCCGCGC > NC_000913/2603194‑2603487 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |