| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 925901 = | 74 (0.850) | 22 (0.250) +C |
17/298 | 9.0 | 26.2% | noncoding (71/88 nt) | serW | tRNA‑Ser |
| ? | NC_000913 | = 1097399 | 51 (0.580) | intergenic (+570/+166) | ycdU/serX | putative inner membrane protein/tRNA‑Ser | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCT‑CGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTC‑GAACCCCGGTC > NC_000913/1097255‑1097488 | cACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGa > 1:899853/1‑150 (MQ=14) cGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgct < 2:1269511/151‑1 (MQ=33) cGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgct < 1:1124175/151‑1 (MQ=33) gTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGGGGGGGGGGTTGaacgggct > 2:1321652/1‑144 (MQ=9) cACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgcttcg < 1:147407/150‑1 (MQ=33) aCGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGATGACtcgcttcgct > 1:1316613/1‑151 (MQ=18) cGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTtcgct‑c < 1:389847/151‑1 (MQ=33) cGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGAGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTtcgct‑c < 2:385579/151‑1 (MQ=18) cGGTCTGTCCAACTGGCTGTCGCCAGTTGACGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTtcgct‑c < 2:495043/151‑1 (MQ=18) gTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGCGGGGGGGGTTTAAACGCTTCGCT‑CGCCCTg > 1:183369/1‑151 (MQ=255) gTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCT‑CGcc < 2:904262/148‑1 (MQ=33) aCTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTTACTCCCTTCCCC‑CGCCCCCCGGGc > 1:663632/1‑151 (MQ=11) cTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCAT‑CCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGATCCCCTTCGCT‑CGCCCTTCgggg > 1:1156395/1‑148 (MQ=11) tGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGGGGGGGGGGTTGACTCGGTTCGCT‑CGCCCTGTgggggg > 2:1359084/1‑148 (MQ=255) ggCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCT‑CGCCCTGCGGGCa < 1:465086/149‑1 (MQ=33) ggCTGTCGCCAGTTGTCGAACACAGCTCCGCGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCT‑CGCCCTGCGGGCa < 2:172166/149‑1 (MQ=255) gCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGGGGGGGGGGTTGAATCGCCTCCCT‑CGcccctccggccgcc > 2:1038990/1‑140 (MQ=11) tGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGAGGGGGGGGATTTCTCGGTTCTCG‑CCCCCTCCTGGGAGcccc > 2:1085753/1‑150 (MQ=1) gTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCT‑CGCCCTGCGGGCAGccc < 1:1082616/149‑1 (MQ=33) gTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCT‑CGCCCTGCGGGCAGCCCg < 1:714276/150‑1 (MQ=33) ccAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCT‑CGCCCTGCGGGCAGCCCGCTCAc < 2:287971/151‑1 (MQ=33) cAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGGGGGGGGGGTTTACTCCCCTCCCT‑CGCCCTCCGGGGAGCCCGGTcggg > 2:1001216/1‑148 (MQ=11) gTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCT‑CGCCCTGCGGGCAGCCCGCTCACTGc < 1:1318131/151‑1 (MQ=33) gTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGAGAGGGGGGGGTTTAAACGCCTCGCC‑CGCCCCGCGGGCAGCCCCCTCCCTgg > 2:882141/1‑150 (MQ=11) tCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGGGAAGAACGCCGGGACTTTCGTACGAGCTCTTCTTTAAATATGGCGGATAGTTGGGGAAAGAATCGGTTCGCC‑CCCCCTTCGGGGCGCCCGCCCACTGCggtt > 2:240244/1‑148 (MQ=2) tCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGACTCCCCCCCCT‑CCCCCCGCGGGGCGCCCCCTccccggggtt > 2:1097114/1‑142 (MQ=11) cGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTTACTCGCCTCCCT‑CCCCCTGCGGGGAGCCCGCTCCCCGCGGTcc > 1:582367/1‑150 (MQ=11) cGAACCCCCGTCGTGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCT‑CGCCCTGCGGGCAGCCCGCTCACTGCGTTc < 2:241872/150‑1 (MQ=18) aaCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGTGAAACCCCTCCAC‑CGCCCTCCGGGACGCCCCCTCCCTGCGGTCACg > 1:286351/1‑151 (MQ=11) ccccGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCT‑CGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGt < 1:125425/151‑1 (MQ=31) ccccGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCT‑CGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGt < 1:1172147/151‑1 (MQ=31) cccGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGAGGGGGGGGTTGAACCCCTTCGCTCCCCCCTGC‑GGCCGCCCGCTCCCCGCGTTCACGGTc > 1:1101733/1‑151 (MQ=11) cGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGAGCGGGGGGGACTTACTCGCCTCGCA‑TGCCCTGCGGGGAGCGCGCCCACTGCGTTCACGGTCTg > 1:196267/1‑151 (MQ=11) ggCTCCTCATTCCCCCCGTGTTTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCT‑CGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACt < 2:591184/151‑1 (MQ=9) ttCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGTTAGACCCCTCCCT‑CTCCCTGGCGGCAGCCCGCCCACTGCGTTTACCGGCTGTcccaaatgg > 1:420374/1‑144 (MQ=11) tctcATCCCCCCGGTGTGTGCAATATACGGAAAAAAAGCCCGTACTTTCGGACGAGCTCTTCTTTAACTATGGCGGCCGGGGGGGGAATAAACCCCGTCGCT‑CGCCCCGCCGGGCGGCCGCTGACCGCGGTCCCGGTTTGTTCAAcctgcc > 2:191317/1‑146 (MQ=2) tctcATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCT‑CGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGc < 2:987678/150‑1 (MQ=31) tcATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGGATCCCCCCCCT‑CCCCCCGCGGGGAGCCCGCTCCCGGCGTGCTCCGTCTGTCCCACTGGCtcc > 2:408769/1‑149 (MQ=11) tcATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGACTCGCTTCGCT‑CGCCCCGCGGGCAGCCCCCCCACTGCGGTCACGGGCTTTCCCACCGGCTGt > 1:799031/1‑151 (MQ=11) cATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTCCGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCT‑CGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTc < 2:61569/151‑1 (MQ=14) gtgcccccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGACTGACTCGCTTCGCT‑CGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCg < 2:733015/148‑1 (MQ=14) tCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGGCTCCCCTCCCTCCTCCCTCGGGGCA‑CCCCCTCCCTGCGGTCCCCCTCTTCCCCACTGGCtctccc > 2:1140560/1‑149 (MQ=2) tCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGACTCGCCTCGCT‑CGCCCTGCGGGGAGCCCCCTCCCCGCGGTCACGGGCTGTCCCACCGGCTGTCGc > 1:623526/1‑151 (MQ=11) tCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGACCCCCCTCCCT‑CGCCCTCCGGGGAGCCCCCCCCCTGCGTTTCCGGGCTTGCCCACTGGCTGTccc > 1:1297323/1‑149 (MQ=11) ccccccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGACTCCCCCCGCC‑CGCCCCCCTGGCGGCCCCCTCCCTGCGGGTACCGTCTGTCCCACCGGccctcccc > 2:670463/1‑144 (MQ=2) cccccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGACTCGCTTCGCT‑CGCCCTGCGGGCAGCCCCCTCCCCGCGGTCACCGTCTGTCCCACCGGCTGTccccc > 1:452222/1‑150 (MQ=11) cccccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCT‑CGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCa < 1:46500/151‑1 (MQ=31) gtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCT‑CGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTC‑Gaa < 1:453781/150‑1 (MQ=11) tgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGAATCGCTTCGCT‑CGCCCCGCGGGCAGCCCGCTCCCTGCGTTCCCCGTCTGTCCCACTGGCTGTCGCCCGTTGTC‑GAAcc > 1:811355/1‑151 (MQ=11) aaTATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCT‑CGCCCTCCGGGCAGCCCGCTCACTGCGTTCACCGGCTGTCCCACTGGCTGTCGCCCGTTGTC‑GAAccccc > 1:933333/1‑150 (MQ=255) tataCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGACTCCCTTCTCC‑CGCCCCCCGGGCAGCCCCCTCACTTCGTTTACCGTCTGTCCCACTGGCTGTCGCCCGCTGTCGGAACCCCgg > 1:1346144/1‑151 (MQ=11) ataCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCT‑CGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTC‑GAACCCCGGTc < 1:945133/151‑1 (MQ=31) ataCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCT‑CGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTC‑GAACCCCGGTc < 1:1262942/151‑1 (MQ=31) | CACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCT‑CGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTC‑GAACCCCGGTC > NC_000913/1097255‑1097488 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |