| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3299599 = | 15 (0.500) | 4 (0.140) | 4/278 | 2.3 | 22.2% | coding (317/444 nt) | yhbP | UPF0306 family protein |
| ? | NC_000913 | 3299641 = | 14 (0.500) | coding (275/444 nt) | yhbP | UPF0306 family protein | |||||
CCAAATCATTTTTTTACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAG‑GTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGACCGTTTACCGTTCCGGCAACCGCAGCCTGCGGCCCACTCATCTGCGCGTGGCGCGTTTTTTCTTCCGTCAAAATGTAGAA > NC_000913/3299502‑3299789 | ccAAATCATTTTTTTACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAG‑GTCGCTTTCCTCACCTTCCAGc < 2:83519/151‑1 (MQ=255) tACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAG‑GTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCAcc < 1:207317/151‑1 (MQ=255) ggtaaacggtcagccgaaaacggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGCGACC‑TCGCGCGCAAGGCGTACAATCGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTaa < 2:113440‑M1/73‑1 (MQ=255) cccAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAG‑GTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAAc < 2:471908/150‑1 (MQ=255) cccAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAG‑GTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAAc < 2:413816/150‑1 (MQ=255) cggtcagccgaaaacggtagcgttaattcgcggtgtgcagtttaaaggggagatccgcaggctggaaggtgaggaaagcgacgattgtacgccttgcgcgcgaggtcgctttccTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGca > 1:92021‑M2/115‑151 (MQ=255) cGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAG‑GTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGcac < 2:67010/150‑1 (MQ=255) cGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAG‑GTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGcac < 2:14438/150‑1 (MQ=255) gaaaacggtagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaggaaagcgacgattgtacgccttgcgcgcgaggtcgctttccTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGaa > 2:438023‑M2/106‑151 (MQ=255) tagcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGCGACC‑TCGCGCGCAAGGCGTACAATCGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGc > 1:113440‑M1/56‑150 (MQ=255) gcgttaattcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaggaaagcgacgattgtacgccttgcgcgcgaggtcgctttccTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTa > 1:113440‑M2/96‑150 (MQ=255) ttcgcggtgtgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGCGACC‑TCGCGCGCAAGGCGTACAATCGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTc > 2:438023‑M1/47‑151 (MQ=255) aGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAG‑GTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCgg > 1:411554/1‑149 (MQ=255) ggATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAG‑GTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGAc > 1:17308/1‑150 (MQ=255) tgcagtttaaaggtgagatccgcaggctggaaggtgaGGAAAGCGACC‑TCGCGCGCAAGGCGTACAATCGTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCCCCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGACCg > 1:92021‑M1/38‑151 (MQ=255) cccACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAG‑GTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGACCGTTTAc < 2:150188/151‑1 (MQ=255) ttaaaggtgagatccgcaggctggaaggtgaggaaagcgacgattgtacgccttgcgcgcgaggtcgctttccTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGACCGTTTAcc < 2:113440‑M2/78‑1 (MQ=255) gCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAG‑GTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGACCGTTTACCGTTCCGGCAACCGCAg > 1:80313/1‑150 (MQ=255) cATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAG‑GTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGACCGTTTACCGTTCCGGCAACCGCAGcc < 2:11508/151‑1 (MQ=255) AAAGCGACGATTGTACGCCTTGCGCGCGAG‑GTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGACCGTTTACCGTTCCGGCAACCGCAGCCTGCGGCCCACTCATc > 2:142250‑M1/1‑151 (MQ=255) ACGATTGTACGCCTTGCGCGCGAG‑GTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGACCGTTTACCGTTCCGGCAACCGCAGCCTGCGGCCCACTCATCTgcgc > 2:193890‑M1/1‑150 (MQ=255) gTACGCCTTGCGCGCGAG‑GTCGCTTTCCTCACCTTCCAGcc < 2:169957/41‑1 (MQ=255) gTACGCCTTGCGCGCGAG‑GTCGCTTTCCTCACCTTCCAGcc > 1:169955/1‑41 (MQ=255) gTACGCCTTGCGCGCGAG‑GTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGACCGTTTACCGTTCCGGCAACCGCAGCCTGCGGCCCACTCATCTGCGCGTGgcg > 1:138342/1‑150 (MQ=255) gtcgctttccTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGACCGTTTACCGTTCCGGCAACCGCAGCCTGCGGCCCACTCATCTGCGCGTGGCGCGTTTTTTCTTCCGCCaaa > 2:341595‑M2/11‑151 (MQ=255) ctttccTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGACCGTTTACCGTTCCGGCAACCGCAGCCTGCGGCCCACTCATCTGCGCGTGGCGCGTTTTTTCTTCCGTCAAAATGt > 1:110747‑M2/7‑151 (MQ=255) ccTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGACCGTTTACCGTTCCGGCAACCGCAGCCTGCGGCCCACTCATCTGCGCGTGGCGCGTTTTTTCTTCCGTCAAAATGTAGaa > 1:393274‑M2/3‑151 (MQ=255) | CCAAATCATTTTTTTACCAAAGCCCAGCGTGTTGTCGGTGAATTTGATTTCATCGAGCCGGATTTCCCACACCGGGGCCGACAGCATTCTGGCAACCGGAAAGCGACGATTGTACGCCTTGCGCGCGAG‑GTCGCTTTCCTCACCTTCCAGCCTGCGGATCTCACCTTTAAACTGCACACCGCGAATTAACGCTACCGTTTTCGGCTGACCGTTTACCGTTCCGGCAACCGCAGCCTGCGGCCCACTCATCTGCGCGTGGCGCGTTTTTTCTTCCGTCAAAATGTAGAA > NC_000913/3299502‑3299789 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |