| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2866995 | 314 (0.880) | 10 (0.030) | 9/134 | NT | 3.4% | intergenic (‑394/+59) | USA300HOU_RS14695/noc_2 | hypothetical protein/Nucleoid occlusion protein |
| ? | USA300TCH1516_ALE | = 2867006 | 306 (1.030) | intergenic (‑405/+48) | USA300HOU_RS14695/noc_2 | hypothetical protein/Nucleoid occlusion protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 127 total aligned reads displayed.
ATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGACAAAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/2866893‑2866995‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaagacaaagctAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAATCAATG < USA300TCH1516_ALE/2867006‑2866916 ATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAA < 1:6311467/91‑1 aATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAAAAAAAAA < 2:846121/90‑1 TATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAA > 2:2377800/1‑91 TAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAA > 1:3436509/1‑91 TAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAA > 1:3954426/1‑91 TAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAA < 1:2262386/91‑1 AACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAG > 1:6547505/1‑91 AACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAG > 1:2451308/1‑91 AACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAG > 1:2063679/1‑91 AACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAG > 1:918563/1‑91 AACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAG > 1:1408213/1‑91 AACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAG > 1:115043/1‑91 ACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTTTGTTTTACGTGAAACATAAAAAttta < 2:2413728/91‑5 ACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGA > 2:3121101/1‑91 CTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGAC > 2:1281857/1‑91 CTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGAC > 1:753174/1‑91 CTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGAC < 1:6222931/91‑1 CTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGAC > 2:3440257/1‑91 CTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGAC < 1:5715141/91‑1 CTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGAC > 2:545916/1‑91 CTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGAC > 1:2989021/1‑91 CTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGAC > 2:5505731/1‑91 CTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTATAAAATAAAAAAAAAAAAAAGAC < 2:3340696/91‑1 TCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGACAA > 2:6941316/1‑91 TCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGACAA > 1:5659424/1‑91 TCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCAAATAAAAAAAAAAAAAAGACAA < 2:5679551/91‑1 CGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGACAAA < 1:1961523/91‑1 GTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTCCACGTAAAACAAAAAAAAAGACAAAa > 1:4725297/1‑90 GTAGAGCATAGAACATTGATTTATGTACCAGCCCGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGACAAAG < 1:5899004/91‑1 GTAGAGCATAGAACATTGATTTATGTACCAGCCCGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGACAAAG < 1:5897492/91‑1 TAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGACAAAGC > 1:6277959/1‑91 TAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGACAAAGC < 1:2278810/91‑1 TAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCAAGTAAAAAAAAAAAAAAGACAAAGC < 1:2801894/91‑1 AGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGACAAAGCT < 1:2777664/91‑1 TAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGACAAAGCTAAGATC < 2:6504360/91‑1 TGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGAAAAAAAAAAAAAAAGACAAAGCTAAGATCATAACAGC < 2:2525884/91‑1 GATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAG > 1:3396252/1‑68 GATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAG < 2:3396252/68‑1 TTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAGGACAAAGCTAAGATCATAACAGCTTTG < 1:5307482/91‑1 ATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGACAAAGCTAAGATCATAACAGCTTTGTC < 1:3606830/91‑1 ATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGACAAAGCTAAGATCATAACAGCTTTGTC < 1:3606750/91‑1 AGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTT < 1:4183377/91‑1 CCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTT < 2:4597413/91‑1 TGTTTCACGTAAAACAAAAAAAAAGACAAAGCTGTTATGATCTTAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATT > 1:6284556/1‑91 tcAAAGACAACGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGG < 2:5543455/89‑1 AAAAAGACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGG < 1:4959873/91‑1 AAAAGACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGT < 2:6153070/91‑1 AAAAGACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGT < 2:6153820/91‑1 AAAGACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTTTTTTTCGTTAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTA > 2:2638362/1‑91 AAAGACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTA < 1:2467831/91‑1 AAAGACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTA > 1:998498/1‑91 AAAGACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTA > 1:3380040/1‑91 AAGACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTAC > 1:5589015/1‑91 AAGACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTAC < 1:870577/91‑1 AGACAAAGCTAAGATCATAACAGCTTTGTCTTTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTAC > 1:2882653/1‑91 AGACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTTTTTTTCTTGAAACATAAAAATTTATATTTATATGTTTATCAGGCTGGTACA > 2:6997679/1‑91 AGACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACg < 1:5221253/91‑2 AGACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACA > 2:4970584/1‑91 AGACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACA < 2:6596189/91‑1 AGACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACA > 1:6571739/1‑91 AGACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACA < 2:1299659/91‑1 AGACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACA < 1:4603692/91‑1 AGACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACA > 1:2977631/1‑91 AGACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTGTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACA < 2:3183540/91‑1 GACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACAT < 1:2198114/91‑1 ACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATA > 1:5990890/1‑91 ACAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATA > 1:5990951/1‑91 CAAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAA < 2:2459123/91‑1 AAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAA < 1:2743214/91‑1 AAAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAA < 1:2743130/91‑1 AAAGCTAAGATCATAACAGCTTTGTC‑‑TTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAAT > 2:4387726/1‑91 AAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTTTTTTTTGTTAAAAATAAAAATTTATATTTATATGTTGATAAGGCTGGTACATAAAT > 2:1921615/1‑91 AAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAAT < 1:2935851/91‑1 AAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAAT < 1:6597688/91‑1 AAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAAT > 1:5350931/1‑91 AAGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAAT < 2:3544791/91‑1 AGCTAAGATCATAACAGCTTTGTT‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAATC < 2:2385173/91‑1 AGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTTTTTTTCGTGAAACATAAAAATTTTTATTTATATGTTGATCAGGTTGGTTCATAAATt > 2:2975984/1‑90 AGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTGTATTTATATGTTGATCAGGCTGGTACATAAATC < 1:6940918/91‑1 AGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAATC > 1:1662698/1‑91 AGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAATC > 2:1378624/1‑91 AGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAATC < 2:3100824/91‑1 AGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAA > 2:1012442/1‑88 AGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAA < 1:1012517/88‑1 AGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAA > 2:1012517/1‑88 AGCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAA < 1:1012442/88‑1 GCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTTTTTTACTTTATATATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAATta > 2:3847490/1‑89 GCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACTTTAAACATAAAAATTTTTATTTATATGTTTATCATGCTTGTACATAAATCt > 2:1895042/1‑90 GCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCATGCTGGTACATAAATCA > 2:1895043/1‑91 GCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAATCA < 2:4800849/91‑1 GCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAATCA > 1:609421/1‑91 GCTAAGATCATAACAGCTTTGTC‑TTTTTTTTTG‑TTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAATCAA < 2:4506895/91‑1 CTAAGATCATAACAGCTTTGTC‑TTTTTTTTTTTTTTTTGTTAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAATCAA > 2:2535229/1‑91 CTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAATCAA < 2:4725906/91‑1 CTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAATCAA > 1:3622774/1‑91 CTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAATCAA < 1:182735/91‑1 CTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAATCAA < 1:1352456/91‑1 CTAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAATCAA < 1:1068591/91‑1 TAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAATCAAT < 2:2047982/91‑1 TAAGATCATAACAGCTTTGTC‑‑TTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGACTGGTACATAAATCAATG < 2:1443741/91‑1 ATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAGACAAAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/2866893‑2866995‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaagacaaagctAAGATCATAACAGCTTTGTC‑TTTTTTTTTGTTTTACGTGAAACATAAAAATTTATATTTATATGTTGATCAGGCTGGTACATAAATCAATG < USA300TCH1516_ALE/2867006‑2866916 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |