| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 2,532,298 | A→T | 100% | T15T (ACA→ACT) | femA_3 → | Aminoacyltransferase FemA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 2,532,298 | 0 | A | T | 100.0% | 236.7 / NA | 73 | T15T (ACA→ACT) | femA_3 | Aminoacyltransferase FemA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (26/47); total (26/47) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
GTATTTGTAATCAGTTTTTGATAAAATAAAAAAATAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACAACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAGATGACAATGGTCAAGTGATTGCAGGATGCTTATTGACAGAAGCAC > USA300TCH1516_ALE/2532164‑2532434 | gtATTTGTAATCAGTTTTTGATAAAATAAAAAAATAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAg < 2:525645/141‑1 (MQ=255)gtATTTGTAATAAGTTTAAGATAAAATAAAAAAATAGCATTATTAATAAATTCAAAAATGATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAg < 2:310715/141‑1 (MQ=255) tataTGTAATAAGATTTAGATAAAATAAAAAAATAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGc < 2:227456/141‑1 (MQ=255) tATTTGTAATTAGTGTTTGATAAAATAAAAAAATAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGc < 2:32778/141‑1 (MQ=255) tttGTAATCATTATTTGAAAAAATAAAAAAATAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCAt < 2:270854/141‑1 (MQ=255) tGTAATCAGTTTTTGATAAAATAAAAAAATAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAACATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCAttt < 1:620783/141‑1 (MQ=255) tGTAATCAGTTTTTGATAAAATAAAAAAATAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCAttt < 1:621215/141‑1 (MQ=255) tAATCAGTTTTTGATAAAATAAAAAAATAGCATTATTAATAAATTCAAAAATTATAGTTCAATTAAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCAttttt > 1:370359/1‑141 (MQ=255) aGTTTTTGATAAAATAAAAAAATAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGTAGGGGTTCAATGCGGTTACTACAAAGCATTTTTCACAt > 2:625140/1‑141 (MQ=255) aGTTTTTGATAAAATAAAAAAATAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGAGGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACAt < 1:660744/141‑1 (MQ=255) aGTTGTTGATAAAATAAGAAAATGGGATTATTAATAAATTCAAGAATTATAGTTCAATTCAGAGAGGGAGGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACAt < 2:146565/141‑1 (MQ=255) gTTTTTGATAAAATAAAAAAATAGCATTATTAATAAATTCAAAAATAATAGATCAATTCAGGTGGGGATGGATTAAAATAAACTTTATAACATTGACTTCTGATAGGTTAAATGCTTTTACTACAAAACATCTTTcaaact > 2:10566/1‑137 (MQ=255) tttttGATAAAATAAAAAAATAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTa > 1:84405/1‑141 (MQ=255) tttGATAAAATAAAAAAATAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTaca > 1:234652/1‑141 (MQ=255) agATAAAATAAAAAAATAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTacaca < 2:727485/140‑1 (MQ=255) gATAAAATAAAAAAATAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTacacac > 1:80894/1‑141 (MQ=255) aataaaataaaAAAATAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTacacac < 2:167497/140‑1 (MQ=255) aataaaaAAATAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCa < 1:588545/141‑1 (MQ=255) taaaaAAATAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑c > 1:552129/1‑141 (MQ=255) taaaaAAATAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑c < 1:609351/141‑1 (MQ=255) aaaaaaaTAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑Ct < 2:19664/141‑1 (MQ=255) aaaaaaaTAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑Ct < 1:314096/141‑1 (MQ=255) aaaaaaaTAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑Ct < 1:393290/141‑1 (MQ=255) aaaaaaaTAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑Ct > 1:611998/1‑141 (MQ=255) aaaaTAGCATTATTAATAAATTCACAAAGTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTAtt > 2:57872/1‑141 (MQ=255) aaaaTAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTAtt > 1:235925/1‑141 (MQ=255) aaaTAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTCTTc > 1:287589/1‑141 (MQ=255) aaTAGCATTGTAAATAAAGTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCa < 2:272206/141‑1 (MQ=255) aaTAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCa < 2:660212/141‑1 (MQ=255) aaTAGCATTATTAATAAATTCAAAAATTATAGTTAAATCTATAGAGGGATGGGATGAAATGAAGTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCa < 2:588403/141‑1 (MQ=255) tttaAAAGATTCAAAAAGTATAGTTCAAATAAGAGAGGGATGGGATAAAATGAATTTTGTAACGTTGATTTCGGATGGGTTCAAGGCTGTGACTACAAAGCATTATTCACATTACACACAATCAG‑CTATTCATTACAATCa < 2:13252/140‑1 (MQ=255) attaATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCa < 1:594889/141‑1 (MQ=255) aaTTCAAAAAGTATAGTTGAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGtt < 2:269745/141‑1 (MQ=255) tCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGAt > 1:144692/1‑141 (MQ=255) aaaaaaTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGAttt < 1:141408/141‑1 (MQ=255) aaaTTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTaa < 1:229694/141‑1 (MQ=255) aaTTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTATACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTaaa < 1:751500/141‑1 (MQ=255) aaTTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTaaa < 2:445487/141‑1 (MQ=255) ataGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGc < 1:553468/141‑1 (MQ=255) ataGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGc > 1:138218/1‑141 (MQ=255) ttCAATTCAGAGAGGGATGGGATAGAATGAACTTTGTAACGTTGAGTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGAtg < 2:574226/141‑1 (MQ=255) ttCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGAtg < 2:363498/141‑1 (MQ=255) aaTTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGc < 1:312405/141‑1 (MQ=255) aTTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCa < 2:377273/141‑1 (MQ=255) aagagggGGATGGGATAAAATGATCTTTGTAACGTTGACTTCGGATGAGTTGAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑TTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCt < 2:574626/140‑1 (MQ=255) agagagGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAACAGGCGATGTGCACCtt > 1:621269/1‑141 (MQ=255) gggatgggatAAGATGAACTGTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTAACATGACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAgg < 2:8091/141‑1 (MQ=255) atgggatAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGt < 2:186031/141‑1 (MQ=255) ataggatAAAATGAAGTTTGTAATGTTGAATTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTTTTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGt < 2:659170/138‑1 (MQ=255) atAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAg < 1:116538/141‑1 (MQ=255) aaaaTGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTGAAAGGCGATGTGCATCTTGGAGGGGTGAAGGAt > 1:114246/1‑141 (MQ=255) aaaaTGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATAAG‑CTATTCATTACACTCATAGAGTTGATTTAAAAAACCATGTGCATTTTGTAAGTGTTAAAGaa > 2:429862/1‑140 (MQ=255) ataTGAACTTTGTACCTTTGCCGTCTGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAA‑CAGCCTATTCATGACAATAATATAGGTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAGATg < 2:95086/139‑1 (MQ=255) aaaTGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAGATg < 2:235925/141‑1 (MQ=255) aaaTGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAGATg < 2:646195/141‑1 (MQ=255) cTTTGTAACGTTTACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAGATGACAATgg < 1:297958/141‑1 (MQ=255) tttGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAGATGACAATGGt < 2:510401/141‑1 (MQ=255) tGTAACGTTGACTTCGGATGCGTTCACTGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCGTAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAGATGACAATGGTCa < 2:125539/141‑1 (MQ=255) tGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAACTGCGTTGAGACAGTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAGATGACAATGGTCa < 2:756938/141‑1 (MQ=255) tAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAGATGACAATGGTCAAg > 1:453202/1‑141 (MQ=255) tAACGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAGATGACAATGGTCAAg > 1:141451/1‑141 (MQ=255) aaCGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATATTGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAGATGACAATGGTCAAGt > 2:634735/1‑141 (MQ=255) aaCGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAGATGACAATGGTAAAga > 2:631164/1‑140 (MQ=255) aCGTTGACTTCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAGATGACAATGGTCAAGTg > 1:10984/1‑141 (MQ=255) ttCGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAGATGACAATGGTCAAGTGATTGCAgg < 2:80894/141‑1 (MQ=255) cGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAGATGACAATGGTCAAGTGATTGCAGGAt > 1:506338/1‑141 (MQ=255) cGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAGATGACAATGGTCAAGTGATTGCAGGAt > 1:148707/1‑141 (MQ=255) cGGATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATATTGTAGGGGTTAAAGATGACAATGGTCAAGTGATTGCAGGAt > 2:739037/1‑141 (MQ=255) gATGAGTTCAATGCGTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAGATGACAATGGTCAAGTGATTGCAGGATGc > 1:476203/1‑141 (MQ=255) tccacgCGTTTACTACAAAGCATTCTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAGATGACAATGGTCAAGTGATTGCAGGATGCTTATTGa < 1:81939/136‑1 (MQ=255) gTTTACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAGATGACAATGGTCAAGTGATTGCAGGATGCTTATTGACAGAAgc > 1:150369/1‑141 (MQ=255) tttACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAGATGACAATGGTCAAGTGATTGCAGGATGCTTATTGACAGAAgca < 1:57872/141‑1 (MQ=255) ttACTACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAGATGACAATGGTCAAGTGATTGCAGGATGCTTATTGACAGAAgcac < 2:552129/141‑1 (MQ=255) | GTATTTGTAATCAGTTTTTGATAAAATAAAAAAATAGCATTATTAATAAATTCAAAAATTATAGTTCAATTCAGAGAGGGATGGGATAAAATGAACTTTGTAACGTTGACTTCGGATGAGTTCAATGCGTTTACAACAAAGCATTTTTCACATTACACACAATCAG‑CTATTCATTACAATCATAGAGTTGATTTAAAAGGCGATGTGCATCTTGTAGGGGTTAAAGATGACAATGGTCAAGTGATTGCAGGATGCTTATTGACAGAAGCAC > USA300TCH1516_ALE/2532164‑2532434 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |