BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 511972	106 (0.820)	9 (0.070)	6/248	NT	8.1%	intergenic (+40/‑821)	recR/rrs1	recombination protein RecR/16S ribosomal RNA
*	?	CP000730	= 512004	101 (0.800)	9 (0.070)	6/248	NT	8.1%	intergenic (+72/‑789)	recR/rrs1	recombination protein RecR/16S ribosomal RNA

Only 100 of 132 total aligned reads displayed.

AAGTGACGAGATTAGCACAAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCGTTGGTTGTG  >  CP000730/511832‑512111

aaGTGACGAGATTAGCACAAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAA                                                                                                                                              <  1:701513‑M1/141‑1 (MQ=255)

aaGTGACGAGATTAGCACAAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAA                                                                                                                                              <  1:1147244‑M1/141‑1 (MQ=255)

 aGTGACGAGATTAGCACAAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAg                                                                                                                                             <  2:14477/141‑1 (MQ=255)

 aGTGACGAGATTAGCACAAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAg                                                                                                                                             <  2:14476/141‑1 (MQ=255)

  gTGACGAGATTAGCACAAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGa                                                                                                                                            <  2:488656/141‑1 (MQ=255)

   tGACGAGATTAGCACAAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGaa                                                                                                                                           >  1:350676/1‑141 (MQ=255)

   tGACGAGATTAGCACAAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGaa                                                                                                                                           >  2:521865/1‑141 (MQ=255)

     aCGAGATTAGCACAAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGaaaa                                                                                                                                         <  1:111177/141‑1 (MQ=255)

     aCGAGATTAGCACAAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGaaaa                                                                                                                                         >  1:686126/1‑141 (MQ=255)

      cGAGATTAGCACAAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAg                                                                                                                                        >  2:878113/1‑141 (MQ=255)

         gaTTAGCACAAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTca                                                                                                                                     >  1:478425/1‑141 (MQ=255)

         gaTTAGCACAAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATAGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTca                                                                                                                                     >  1:633368/1‑141 (MQ=255)

          aTTAGCACAAGGGTTATCGGTAGGTGGCGATTTACAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTcac                                                                                                                                    <  1:1534397/141‑1 (MQ=255)

             aGCACAAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAgt                                                                                                                                 <  1:1648068/141‑1 (MQ=255)

               cacaAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAgtg‑t                                                                                                                              <  2:166933/141‑1 (MQ=255)

                acaAGGGTTATCGGTAGTTGGCGATTTAGAGTATGCTGACGAAGTAACACTAACTAAAGCAATCGCAGGAAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATAATATAGTAAGAAAAGTCACAGTG‑Ta                                                                                                                             >  2:1074792/1‑141 (MQ=255)

                 caAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCATGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑Taa                                                                                                                            <  2:900953/141‑1 (MQ=255)

                    gggTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCa                                                                                                                         <  1:1376893/141‑1 (MQ=255)

                       ttATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAgaaaagccacaatgattacactg                                                                                                                       <  2:246203‑M1/141‑24 (MQ=255)

                       ttATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAgaaaagccacaatgattacactg                                                                                                                       <  2:890835‑M1/141‑24 (MQ=255)

                       ttATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATtg                                                                                                                      >  1:1231504/1‑141 (MQ=255)

                        tATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAgaaaagccacaatgattacactgt                                                                                                                      <  2:31884‑M1/141‑25 (MQ=255)

                        tATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATtgt                                                                                                                     <  1:403862/141‑1 (MQ=255)

                          tCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAgaaaagccacaatgattacactgtga                                                                                                                    <  2:289402‑M1/141‑27 (MQ=255)

                          tCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAgaaaagccacaatgattacactgtga                                                                                                                    <  2:865227‑M1/141‑27 (MQ=255)

                           cGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGc                                                                                                                  >  2:642889/1‑141 (MQ=255)

                             gTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCtt                                                                                                                <  2:1483631/141‑1 (MQ=255)

                               aGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCtttt                                                                                                              >  2:41097/1‑141 (MQ=255)

                                ggTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCttttt                                                                                                             >  2:569185/1‑141 (MQ=255)

                                ggTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCttttt                                                                                                             >  1:15414/1‑141 (MQ=255)

                                ggTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCttttt                                                                                                             >  2:525612/1‑141 (MQ=255)

                                           agagTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTAtggtgtgg                                                                                                  <  2:1138017/141‑1 (MQ=255)

                                           agagTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTAtggtgtgg                                                                                                  >  2:634221/1‑141 (MQ=255)

                                           agagTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAAAAAAGCCACAATG‑ATTACACTGTGACTTTTCttactatagta                                                                                                  >  2:573187‑M2/1‑130 (MQ=255)

                                            gagTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TGATCATTGTGGCTTTTTTTAtggtgtggt                                                                                                 <  2:827391/141‑1 (MQ=255)

                                            gagTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTAtggtgtggt                                                                                                 <  1:776590/141‑1 (MQ=255)

                                            gagTATGCTGACGAAGTAACATTATCTAAAGCAACCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTAtggtgtggt                                                                                                 >  1:1255354/1‑141 (MQ=255)

                                              gTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATggtgtggtgt                                                                                               >  2:607357/1‑141 (MQ=255)

                                                 tGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGAt                                                                                            >  1:516212/1‑141 (MQ=255)

                                                  gCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAAAAAAGCCACAATGATTA‑CACTGTGACTTTTCttactatagtattaaaat                                                                                           >  2:1545418‑M2/1‑123 (MQ=255)

                                                         aaGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTactact                                                                                    <  2:1334649/141‑1 (MQ=255)

                                                          aGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGGACTACtt                                                                                   >  2:89980/1‑141 (MQ=255)

                                                          aGTAACATTATCTAAAGCAATCGCAGGGAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGCTTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACtt                                                                                   <  1:1159006/141‑1 (MQ=255)

                                                             aaCATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCCTCTATTAAACATTTTTTTTTTTTTTACTATAGTAAGAAAAGTCACAGTA‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACtttct                                                                                >  2:806312/1‑139 (MQ=255)

                                                                 ttATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGc                                                                            <  2:254640/141‑1 (MQ=255)

                                                                   aTCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCgg                                                                          <  2:1500945/141‑1 (MQ=255)

                                                                   aTCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCgg                                                                          <  1:159391/141‑1 (MQ=255)

                                                                   aTCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCgg                                                                          <  2:522532/141‑1 (MQ=255)

                                                                    tCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATTCTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGgt                                                                         <  1:619498/141‑1 (MQ=255)

                                                                     cTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGTAAAGACACAGTG‑TTATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGgtg                                                                        >  1:1313315/1‑141 (MQ=255)

                                                                          gCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCg                                                                   <  2:1109057/141‑1 (MQ=255)

                                                                          gCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCg                                                                   <  1:277373/141‑1 (MQ=255)

                                                                          gCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAAAAAAGCCACAATG‑ATTACACTGTGACTTTTCttactatagtattaaaatcaaaaatgtttaatagaagacatt                                                                   >  1:419078‑M2/1‑99 (MQ=255)

                                                                            aaTCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCggt                                                                 <  1:221388/141‑1 (MQ=255)

                                                                             aTCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCggtg                                                                >  1:806338/1‑141 (MQ=255)

                                                                             aTCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCggtg                                                                <  1:878113/141‑1 (MQ=255)

                                                                             aTCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCggtg                                                                <  1:700365/141‑1 (MQ=255)

                                                                              tCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCggtgg                                                               >  1:1218240/1‑141 (MQ=255)

                                                                              tCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCggtgg                                                               <  1:229422/141‑1 (MQ=255)

                                                                               cGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCggtggt                                                              >  2:178023/1‑141 (MQ=255)

                                                                                gCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTa                                                             >  1:171425/1‑141 (MQ=255)

                                                                                   ggTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATgg                                                          >  2:876847/1‑141 (MQ=255)

                                                                                     tAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGtt                                                        >  1:133458/1‑141 (MQ=255)

                                                                                     tAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGtt                                                        <  2:1087083/141‑1 (MQ=255)

                                                                                      aGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGttt                                                       >  1:730721/1‑141 (MQ=255)

                                                                                       gAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTa                                                      >  2:1168435/1‑141 (MQ=255)

                                                                                            gagatgtaatgtCTTCTATTAAACATTTTTGATTGTAATACTATGGTAAGAGAAGTCACAGTG‑TAGTCAGTGTGGCTTGTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAg                                                 <  2:1655833/138‑1 (MQ=255)

                                                                                             aaaTGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGt                                                <  2:739015/141‑1 (MQ=255)

                                                                                             aaaTGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGt                                                >  2:1435676/1‑141 (MQ=255)

                                                                                             aaaTGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAAACATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGt                                                >  1:425770/1‑141 (MQ=255)

                                                                                             aaaTGTAATGTCTTCTATTAAACATTTTTGATTTTAATAATATAGAAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGt                                                <  2:1146300/141‑1 (MQ=255)

                                                                                                 gtaatgtCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTa                                            >  1:1496442/1‑141 (MQ=255)

                                                                                                   aatgtCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAgaaaagtcacagtgtaatcattgtggctttttttactatagtattaaaatcaaaaatgtttaatagaagacattacatttctgttctacctgcgattgc                                           >  1:419078‑M1/1‑42 (MQ=255)

                                                                                                   aatgtCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACt                                          <  1:927772/141‑1 (MQ=255)

                                                                                                      gtCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAg                                       <  1:791366/141‑1 (MQ=255)

                                                                                                        cttctATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAggg                                     >  2:1104871/1‑141 (MQ=255)

                                                                                                         ttctATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGa                                    <  2:1079726/141‑1 (MQ=255)

                                                                                                           ctATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATg                                  <  2:598978/141‑1 (MQ=255)

                                                                                                             aTTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATggg                                >  1:1390025/1‑141 (MQ=255)

                                                                                                             aTTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATggg                                <  1:743146/141‑1 (MQ=255)

                                                                                                              ttAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGCGGGCTGGGt                               <  2:738285/141‑1 (MQ=255)

                                                                                                              ttAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGt                               <  2:15414/141‑1 (MQ=255)

                                                                                                                   cATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATTGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTTCCTAGTTTTACTGAGGGATGTGTAATCt                          >  2:630164/1‑141 (MQ=255)

                                                                                                                    aTTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTGATCtt                         >  2:840231/1‑141 (MQ=255)

                                                                                                                     tttttGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCttt                        >  1:303261/1‑141 (MQ=255)

                                                                                                                       tttGATTTTAATACTATAGTAAGAAAGGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAg                      <  2:1307924/141‑1 (MQ=255)

                                                                                                                       tttGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAg                      <  1:569185/141‑1 (MQ=255)

                                                                                                                        ttGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAgg                     <  2:527767/141‑1 (MQ=255)

                                                                                                                         tGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGa                    >  1:72408/1‑141 (MQ=255)

                                                                                                                          ttttttttttcTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGTGGTGTGGCTGTGTTATGGTTTACCTAGTTTTACTGAGGGATTGGTAATCTTTAGGaa                   >  2:1511692/11‑141 (MQ=255)

                                                                                                                          gATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGaa                   <  2:686126/141‑1 (MQ=255)

                                                                                                                           aTTTTAATACTATAGTAAgaaaagtcacagtgtaatcattgtggctttttttactatagtattaaaatcaaaaatgtttaatagaagacattacatttctgttctacctgcgattgctttagataatgttacttcgtcagc                   >  2:1545418‑M1/1‑18 (MQ=255)

                                                                                                                              ttAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGaagcaa               >  1:855574/1‑141 (MQ=255)

                                                                                                                                  tACTATAGTAAgaaaagtcacagtgtaatcattgtggctttttttactatagtattaaaatcaaaaatgtttaatagaagacattacatttctgttctacctgcgattgctttagataatgttacttcgtcagcatactct            >  2:573187‑M1/1‑11 (MQ=255)

                                                                                                                                  tACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCg           <  1:1220761/141‑1 (MQ=255)

                                                                                                                                   aCTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCgt          <  1:521865/141‑1 (MQ=255)

                                                                                                                                   aCTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCgt          <  1:1162808/141‑1 (MQ=255)

                                                                                                                                      ataGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCgttgg       >  1:188661/1‑141 (MQ=255)

                                                                                                                                          tAAaaaaagccacaatgattacactgtgacttttcttactatagtattaaaatcaaaaatgtttaatagaagacattacatttctgttctacctgcgattgctttagataatgttacttcgtcagcatactctaaatcgcc    >  2:616641‑M1/1‑3 (MQ=255)

                                                                                                                                            aaaaaagccacaatgattacactgtgacttttcttactatagtattaaaatcaaaaatgtttaatagaagacattacatttctgttctacctgcgattgctttagataatgttacttcgtcagcatactctaaatcgccac  >  1:261335‑M1/1‑1 (MQ=255)

AAGTGACGAGATTAGCACAAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCGTTGGTTGTG  >  CP000730/511832‑512111

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.