BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 2716752	118 (0.910)	6 (0.050)	4/232	NT	4.9%	intergenic (+60/+90)	ynzC/USA300HOU_2569	hypothetical protein/possible lactoylglutatione lyase
*	?	CP000730	= 2716804	123 (1.040)	6 (0.050)	4/232	NT	4.9%	intergenic (+112/+38)	ynzC/USA300HOU_2569	hypothetical protein/possible lactoylglutatione lyase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 191 total aligned reads displayed.

CAACAATACGGTTATATTCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGCT  >  CP000730/2716666‑2716944

caacaaTACGGTTATATTCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgt                                                                                                                                             <  2:1052332‑M2/141‑3 (MQ=255)

  acaaTACGGTTATATTCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtat                                                                                                                                           >  1:819008‑M2/1‑137 (MQ=255)

  acaaTACGGGTATATNCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtat                                                                                                                                           <  2:458309‑M2/141‑5 (MQ=255)

       aCGGTTATATTCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgggct                                                                                                                                      <  2:1607635‑M2/141‑10 (MQ=255)

        cGGTTATATTCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgggctt                                                                                                                                     <  1:1007733‑M2/141‑11 (MQ=255)

         ggTTATATTCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgggcttt                                                                                                                                    <  2:432012‑M2/141‑12 (MQ=255)

         aagatcttgatggacaccattttaattttttggtctgctaaaatgaaattctcaaaagaataaataaAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCttt                                                                                                                                    >  1:1463664‑M1/68‑141 (MQ=255)

          gTTATATTCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGATCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCtttt                                                                                                                                   <  1:524925/141‑1 (MQ=255)

            atcttgatggacaccattttaattttttggtctgctaaaatgaaattctcaaaagaataactaaAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTttta                                                                                                                                 >  1:1159425‑M1/65‑141 (MQ=255)

              tatTCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTttta‑tt                                                                                                                              <  2:59297/141‑1 (MQ=255)

                         aaTATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTga                                                                                                                   >  1:1328686/1‑141 (MQ=255)

                         aaTATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTga                                                                                                                   >  1:441358/1‑141 (MQ=255)

                          atatTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCCCCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTgag                                                                                                                  >  1:1650264/1‑141 (MQ=255)

                           tatTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTgaga                                                                                                                 >  2:619846/1‑141 (MQ=255)

                           tatTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTgaga                                                                                                                 <  1:147958/141‑1 (MQ=255)

                           tatTTGCGCGCGCGGCTTTGCACTTGGGATGCCAACTGACCTCATCAACAAAGCCCATCCTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTCTGGGCTTTTTA‑TTTATTCTTTTgaga                                                                                                                 <  2:67258/141‑1 (MQ=255)

                            atTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGaa                                                                                                                <  2:487463/141‑1 (MQ=255)

                             tttGCTCACGAGGTATTGGACGTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAAt                                                                                                               <  1:13497/141‑1 (MQ=255)

                                   cACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCAtt                                                                                                         >  1:1565810/1‑141 (MQ=255)

                                   cACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCAtt                                                                                                         >  1:1138200/1‑141 (MQ=255)

                                    aCGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTttta‑tt                                                                                                                              <  1:1630618/119‑1 (MQ=255)

                                      gAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGACTTTCATTTTa                                                                                                      >  1:870192/1‑141 (MQ=255)

                                        ggTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGc                                                                                                    <  2:982748/141‑1 (MQ=255)

                                           aTTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGa                                                                                                 >  2:1167715/1‑141 (MQ=255)

                                            ttGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGAc                                                                                                <  1:1064994/141‑1 (MQ=255)

                                               cACTTAAGGGGCCAACTGGCCTCATAAACAAAGCTCATACTTATTGAAGACACTAATGTGTCTCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCaa                                                                                             <  1:1575601/141‑1 (MQ=255)

                                                aCTTAAGGTGCCAACCGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCaaa                                                                                            <  2:155584/141‑1 (MQ=255)

                                                    aaGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAAt                                                                                        <  1:94125/141‑1 (MQ=255)

                                                     aGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAAtt                                                                                       >  1:270592/1‑141 (MQ=255)

                                                     aGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAAtt                                                                                       <  1:728211/141‑1 (MQ=255)

                                                     aGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCCCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATCTCATTTTAGCAGACCAAAAAAtt                                                                                       >  2:936252/1‑141 (MQ=255)

                                                      ggTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTa                                                                                      >  1:770515/1‑141 (MQ=255)

                                                       gTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTttta‑tt                                                                                                                              >  1:1025491/1‑100 (MQ=255)

                                                       gTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTaa                                                                                     >  2:1641731/1‑141 (MQ=255)

                                                       gTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTaa                                                                                     <  1:666695/141‑1 (MQ=255)

                                                           cAACTGACCTCATAAACAAAGCCCACACTGTTTGTAGACACTAAGGTGTCGGACCAGGGTGCACATTTCGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTAAAAAAAAAAAAAAAATTAAAATg                                                                                 <  2:736479/141‑1 (MQ=255)

                                                             aCTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGgt                                                                               >  1:805501/1‑141 (MQ=255)

                                                             aCTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGgt                                                                               >  1:690892/1‑141 (MQ=255)

                                                                  ccTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCa                                                                          >  1:399164/1‑141 (MQ=255)

                                                                   ctaaTACACAAAGCCCATACTGATTGAAGTCACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCAt                                                                         <  2:1120858/138‑1 (MQ=255)

                                                                   cTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCGGACCAAAAAATTAAAATGGTGTCCAt                                                                         >  2:1434798/1‑141 (MQ=255)

                                                                    tCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATc                                                                        >  1:1419511/1‑141 (MQ=255)

                                                                    tCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATc                                                                        <  1:796039/141‑1 (MQ=255)

                                                                    tCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATc                                                                        <  1:1518818/141‑1 (MQ=255)

                                                                     cATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCa                                                                       >  1:519446/1‑141 (MQ=255)

                                                                          aCAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATc                                                                  <  1:127807/141‑1 (MQ=255)

                                                                           cAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCt                                                                 >  2:553473/1‑141 (MQ=255)

                                                                            AAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCtt                                                                <  2:441965‑M1/141‑1 (MQ=255)

                                                                            AAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCAAATTACGCTTCATCTCTGTATGCTCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCtt                                                                >  1:744704‑M1/1‑141 (MQ=255)

                                                                             AAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCttt                                                               <  2:356801‑M1/141‑1 (MQ=255)

                                                                             AAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCttt                                                               <  2:95421‑M1/141‑1 (MQ=255)

                                                                              AGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTCTGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTg                                                              <  2:1390377‑M1/141‑1 (MQ=255)

                                                                              AGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTg                                                              <  2:244243‑M1/141‑1 (MQ=255)

                                                                              AGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTg                                                              >  2:1419511‑M1/1‑141 (MQ=255)

                                                                               GCCCATACTGATTGAAGACACTAGTGTGTCGCACCATGGTGCACATTACGCTGCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGGGTATTTCATTTTAGCAGACCAAAAAAGTAAAATGGTGTCCATCAAGATCTTTGa                                                             >  2:1630255‑M1/1‑141 (MQ=255)

                                                                                 CCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAAc                                                           <  2:1551468‑M1/141‑1 (MQ=255)

                                                                                 CCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAAc                                                           <  1:1383058‑M1/141‑1 (MQ=255)

                                                                                   ttACTGATTGAGGACACTAATGTGTCGCTCTAAGGTGCACATTACGCTTCATCTCTGTATGGGCCTTTTA‑TTTATTCTTTTGAGACTGTCATTTTAGCAGACCAAAAAATTATAATTGTCTCAATCCAGATCCTTGAAcct                                                         <  2:629570/140‑3 (MQ=255)

                                                                                     ACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACattt                                                       <  1:349790‑M1/141‑2 (MQ=255)

                                                                                     ACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTg                                                       <  2:1032933‑M1/141‑1 (MQ=255)

                                                                                     ACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTg                                                       <  1:251069‑M1/141‑1 (MQ=255)

                                                                                       tGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgggctttgtttatgaggtcagttggcaccttaagtgcaatacctcgtgagcaaatattaattttgaatataaccgtattgttggc                                                      <  1:1163824‑M2/141‑90 (MQ=255)

                                                                                       tGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgggctttgtttatgaggtcagttggcaccttaagtgcaatacctcgtgagcaaatattaattttgaatataaccgtattgttggc                                                      <  1:1249156‑M2/141‑90 (MQ=255)

                                                                                       tGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCt                                                     >  1:1527474/1‑141 (MQ=255)

                                                                                        gATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTgtatgggctttgtttatgaggtcagttggcaccttaagtgcaatacctcgtgagcaaatattaattttgaatataaccgtattgttggcg                                                     <  2:295242‑M2/141‑91 (MQ=255)

                                                                                           tgacaacacTAATGTGTCGCACCATGGTAAACATTACGCTTCATTTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAACAGACAAAAAAATTAAAATGGTGTCCATCAAGATCTCTGAACATTGCTCCAt                                                 <  2:198882/136‑1 (MQ=255)

                                                                                            gAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATa                                                >  2:610526/1‑141 (MQ=255)

                                                                                              aGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATaaa                                              >  2:510396/1‑141 (MQ=255)

                                                                                              aGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATaaa                                              <  2:639575/141‑1 (MQ=255)

                                                                                                   cTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCt                                         <  1:236035/141‑1 (MQ=255)

                                                                                                     ttagtgtCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTg                                       >  1:1468992/4‑141 (MQ=255)

                                                                                                     aaTGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTGGGATAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTg                                       <  1:29645/141‑1 (MQ=255)

                                                                                                      aTGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAAATCTTTGAACATTGCTCCATAAAACCCTTgg                                      >  1:1354138/1‑141 (MQ=255)

                                                                                                       tgtgTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGc                                     <  2:1149445/141‑1 (MQ=255)

                                                                                                       tgtgTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGc                                     <  2:1131766/141‑1 (MQ=255)

                                                                                                        gtgtCGCACCGTGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCt                                    <  1:483687/141‑1 (MQ=255)

                                                                                                        gtgtCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAAt                                                                                        <  1:670254/89‑1 (MQ=255)

                                                                                                        gtgtCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCt                                    >  2:884359/1‑141 (MQ=255)

                                                                                                           tCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTAc                                 <  2:1596195/141‑1 (MQ=255)

                                                                                                           tCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTAAGCAGAACAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTAc                                 <  2:166234/141‑1 (MQ=255)

                                                                                                              cACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGt                              <  2:1133026/141‑1 (MQ=255)

                                                                                                               aCCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGtt                             >  1:846432/1‑141 (MQ=255)

                                                                                                               aCCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGtt                             >  2:1424827/1‑141 (MQ=255)

                                                                                                                 cATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTgg                           >  1:1648240/1‑141 (MQ=255)

                                                                                                                   tGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATAAAAGAAAAAAAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGtt                         <  2:1352964/141‑1 (MQ=255)

                                                                                                                    ggTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTc                        >  1:199149/1‑141 (MQ=255)

                                                                                                                    ggTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTc                        >  2:1259368/1‑141 (MQ=255)

                                                                                                                       gCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTg                     >  2:971094/1‑141 (MQ=255)

                                                                                                                        cacaTTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGa                    <  2:1444407/141‑1 (MQ=255)

                                                                                                                        cacaTTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGa                    >  2:1079383/1‑141 (MQ=255)

                                                                                                                          caTTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAAc                  >  2:1018882/1‑141 (MQ=255)

                                                                                                                           aTTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACg                 <  1:983627/141‑1 (MQ=255)

                                                                                                                               cGCTTCATCTCTGTATGGACTTTTTA‑TATATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACtg             <  2:374983/141‑1 (MQ=255)

                                                                                                                                 cTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACtgtg           >  2:573963/1‑141 (MQ=255)

                                                                                                                                   tCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGcc         <  1:619846/141‑1 (MQ=255)

                                                                                                                                    cATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTTCCa        >  1:649929/1‑141 (MQ=255)

                                                                                                                                    cATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCa        <  2:870468/141‑1 (MQ=255)

                                                                                                                                        tctGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCg    >  2:838883/1‑141 (MQ=255)

                                                                                                                                         ctGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGc   <  1:425131/141‑1 (MQ=255)

                                                                                                                                          tGTATGGGCTTTGTATTTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGc   <  2:268720/141‑1 (MQ=255)

CAACAATACGGTTATATTCAAAATTAATATTTGCTCACGAGGTATTGCACTTAAGGTGCCAACTGACCTCATAAACAAAGCCCATACTGATTGAAGACACTAATGTGTCGCACCATGGTGCACATTACGCTTCATCTCTGTATGGGCTTTTTA‑TTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGCT  >  CP000730/2716666‑2716944

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.