Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 2,744,205 A→G 5.7% intergenic (+142/+51) fdaB → / ← mqo2 fructose‑bisphosphate aldolase/malate dehydrogenase (acceptor)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007302,744,2050AG 5.7% 490.9 / 14.3 159intergenic (+142/+51)fdaB/mqo2fructose‑bisphosphate aldolase/malate dehydrogenase (acceptor)
Reads supporting (aligned to +/- strand):  ref base A (74/76);  new base G (5/4);  total (79/80)
Fisher's exact test for biased strand distribution p-value = 7.46e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.39e-01

Only 100 of 165 total aligned reads displayed.

TATACATTAAACTATTTTTTGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCTTCAATTAATGATTCA  >  CP000730/2744066‑2744343
                                                                                                                                            |                                                                                                                                           
tataCATTAAACTATTTTTTGATATAAACTACTAAAAAGGAGTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑aaa                                                                                                                                            <  1:593310/141‑1 (MQ=255)
tataCATTAAACTATTTTTTGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑aaa                                                                                                                                            <  2:1130464/141‑1 (MQ=255)
  taCATTAAACTATTTTTTTTTTTTTTTTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTTCAGTTGATTTTGCCTTATGTATTAGATTACGTAAAAAAATCGTACAGCTG‑aaaaa                                                                                                                                          >  2:866712/1‑141 (MQ=255)
  taCATTAAACTATTTTTTGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑aaaaa                                                                                                                                          <  1:1016760/141‑1 (MQ=255)
   aCATTAAACTATTTTTTGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAAt                                                                                                                                         <  2:1623824/141‑1 (MQ=255)
      ataaattagtttttGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCtt                                                                                                                                      >  2:1351345/10‑141 (MQ=255)
       tAAACTATTTTTTGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCttt                                                                                                                                     <  1:125706/141‑1 (MQ=255)
       tAAACTATTTTTTGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCttt                                                                                                                                     <  2:616176/141‑1 (MQ=255)
         accTATTTTTGGATATAAACTACTAAAAGGGACTCATACATGTGTTTTAAAGGTATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAACTCGGACAGCTG‑AAAAATCTTaaa                                                                                                                                   <  2:816657/139‑1 (MQ=255)
          aCTATTTTTTGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAACTG‑AGAAATCTTAAAg                                                                                                                                  <  1:1208673/141‑1 (MQ=255)
              ttttttGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGAttt                                                                                                                              >  1:1442138/1‑141 (MQ=255)
               tttttGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTt‑c                                                                                                                            >  1:592621/1‑141 (MQ=255)
               tttttGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTt‑c                                                                                                                            <  1:568428/141‑1 (MQ=255)
               tttttGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTt‑c                                                                                                                            <  2:1311519/141‑1 (MQ=255)
                ttttGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTt‑ct                                                                                                                           <  1:1177706/141‑1 (MQ=255)
                ttttGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGAAAACATAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTt‑ct                                                                                                                           <  2:1602302/141‑1 (MQ=255)
                    gATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGt                                                                                                                       <  2:1110642/141‑1 (MQ=255)
                     atatAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTTTTTTTTTTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGtt                                                                                                                      >  2:1152038/1‑141 (MQ=255)
                     atatAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGtt                                                                                                                      >  1:1186062/1‑141 (MQ=255)
                      tataAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTg                                                                                                                     <  2:519694/141‑1 (MQ=255)
                        taAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTc                                                                                                                   <  2:748733/141‑1 (MQ=255)
                         taaCTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAACTG‑AGAAATCTTAAAGATTT‑TTCAGCTGTcc                                                                                                                  <  1:1648845/140‑1 (MQ=38)
                         aaaCTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTcc                                                                                                                  <  1:109868/141‑1 (MQ=255)
                         aaaCTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTcc                                                                                                                  <  1:1510063/141‑1 (MQ=255)
                         aaaCTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTcc                                                                                                                  <  1:673473/141‑1 (MQ=255)
                          aaCTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCg                                                                                                                 >  2:1044268/1‑141 (MQ=255)
                           actactAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGa                                                                                                                >  1:69282/1‑141 (MQ=255)
                             tactaAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAAATCTTTAAGATTT‑CTCAGTTGTCCGAt                                                                                                               >  2:982945/1‑141 (MQ=255)
                             tactaAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGAtt                                                                                                              <  2:1253759/141‑1 (MQ=255)
                             tactaAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGAtt                                                                                                              <  1:1425576/141‑1 (MQ=255)
                             tactaAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGAtt                                                                                                              <  2:835809/141‑1 (MQ=255)
                              actaAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGAttt                                                                                                             <  2:1496721/141‑1 (MQ=255)
                              actaAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGAttt                                                                                                             <  2:1216180/141‑1 (MQ=255)
                                taAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTaa                                                                                                                                   <  2:332295/118‑1 (MQ=255)
                                taAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTaa                                                                                                                                   >  1:332295/1‑118 (MQ=255)
                                  aaaaGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTCGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTGAAGATTT‑CTCAGTTGTCCGATTTTaaa                                                                                                         >  2:730067/1‑141 (MQ=255)
                                   aaaGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAat                                                                                                        >  2:10308/1‑141 (MQ=255)
                                        aCTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTTTTTTTTTTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGc                                                                                                   >  2:584765/1‑141 (MQ=255)
                                        aCTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGc                                                                                                   <  1:1015641/141‑1 (MQ=255)
                                         cTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCt                                                                                                  >  1:1505285/1‑141 (MQ=255)
                                         cTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCt                                                                                                  >  2:486974/1‑141 (MQ=255)
                                         cTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCt                                                                                                  >  1:750640/1‑141 (MQ=255)
                                           aatatatGTGCTTTAAATGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGAAAAAGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTAt                                                                                                <  2:813372/140‑1 (MQ=255)
                                               cATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGa                                                                                            <  1:625928/141‑1 (MQ=255)
                                                 tgtgCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAAt                                                                                          >  2:1650539/1‑141 (MQ=255)
                                                         aaaGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGtttt                                                                                  >  2:214151/1‑141 (MQ=255)
                                                         aaaGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATATTAAAGCTTTCCTCA‑TTATCTGCATTTTATTTTTTCTATTAGAAATTAGtttt                                                                                  >  1:1562504/1‑141 (MQ=255)
                                                            ggCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAACATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCgt                                                                               >  1:323185/1‑141 (MQ=255)
                                                            ggCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCgt                                                                               >  1:1041783/1‑141 (MQ=255)
                                                              cATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAg                                                                                                                        <  1:782687/98‑1 (MQ=255)
                                                              cATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCgtag                                                                             >  1:754867/1‑141 (MQ=255)
                                                               aTTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGGTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCgtagt                                                                            >  1:1306073/1‑141 (MQ=255)
                                                                ttGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAAttaggttactacgaaa                                                                           <  1:139090/141‑15 (MQ=255)
                                                                ttGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCgtagta                                                                           >  1:1134581/1‑141 (MQ=255)
                                                                   tgtATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAAcc                                                                        <  2:546931/141‑1 (MQ=255)
                                                                     tATGAGTCTTTTTTTATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTa                                                                      >  1:1347143/1‑141 (MQ=255)
                                                                      aTGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTaa                                                                     >  1:995964/1‑141 (MQ=255)
                                                                          gTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCt                                                                 >  1:1261098/1‑141 (MQ=255)
                                                                          gTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCt                                                                 >  2:192216/1‑141 (MQ=255)
                                                                             ttttttGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAg                                                              <  2:146319/141‑1 (MQ=255)
                                                                                ttttttttttgTTGATTTTGACGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTACGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCt                                                           >  2:1120566/11‑141 (MQ=255)
                                                                                 ttGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCtt                                                          >  1:176471/1‑141 (MQ=255)
                                                                                 ttGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCtt                                                          >  2:1543274/1‑141 (MQ=255)
                                                                                  tGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCttt                                                         >  1:242663/1‑141 (MQ=255)
                                                                                   gATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCtttt                                                        <  1:1584375/141‑1 (MQ=255)
                                                                                   gATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCtttt                                                        <  1:1109747/141‑1 (MQ=255)
                                                                                     ttAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTgt                                                      >  2:1359450/1‑140 (MQ=255)
                                                                                     taaaaGTTGATGTTGCCGTATGTATTAGATTACGTAAAAAAATCGAACAGCTT‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGa                                                      <  2:1035861/139‑1 (MQ=255)
                                                                                         aGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAgtt                                                  >  1:713739/1‑141 (MQ=255)
                                                                                          gTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAgttt                                                 <  2:249640/141‑1 (MQ=255)
                                                                                                 ttGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACg                                          <  1:1110392/141‑1 (MQ=255)
                                                                                                 ttGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACg                                          <  2:1465051/141‑1 (MQ=255)
                                                                                                  tGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACgg                                         <  2:1378565/141‑1 (MQ=255)
                                                                                                             ttAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCAt                              <  1:1071912/141‑1 (MQ=255)
                                                                                                             ttAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCAt                              <  2:25117/141‑1 (MQ=255)
                                                                                                                gATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTaa                           >  1:669750/1‑141 (MQ=255)
                                                                                                                gATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTaa                           >  2:1657688/1‑141 (MQ=255)
                                                                                                                 aTTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAAt                          <  1:459276/141‑1 (MQ=255)
                                                                                                                   tACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAAttt                        >  2:69516/1‑141 (MQ=255)
                                                                                                                   tACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAAttt                        <  2:1168808/141‑1 (MQ=255)
                                                                                                                    aCGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAAtttt                       >  2:1442637/1‑141 (MQ=255)
                                                                                                                     cGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAAttttt                      <  2:935466/141‑1 (MQ=255)
                                                                                                                      gTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTAt                                                                                                >  1:128940/1‑66 (MQ=255)
                                                                                                                      gTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTc                     >  2:1506564/1‑141 (MQ=255)
                                                                                                                      gTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTc                     >  1:934678/1‑141 (MQ=255)
                                                                                                                         aaaaaaTCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTCGTTTTCGTAGTAACCTAATTTTAAGTATTTTGGAGTTTGTTTATGGATTTTTTTCATTAATTTTTTGTc                  >  1:322834/1‑141 (MQ=255)
                                                                                                                         aaaaaaTCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTc                  >  1:99285/1‑141 (MQ=255)
                                                                                                                         aaaaaaTCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTc                  >  1:346889/1‑141 (MQ=255)
                                                                                                                          aaaaaTCTGACAGCTG‑AAAAATCTTTAAGATTT‑CACAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCt                 <  1:97366/141‑1 (MQ=255)
                                                                                                                          aaaaaTCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGACTTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTcc                 <  1:1570284/141‑2 (MQ=255)
                                                                                                                          aaaaaTCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCt                 <  1:341153/141‑1 (MQ=255)
                                                                                                                            aaaTCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCTTc               >  1:463082/1‑141 (MQ=255)
                                                                                                                            aaaTCGGACAACTG‑AGAAATCTTAAAGATTT‑TTCAGCTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCTTc               >  1:418798/1‑141 (MQ=37)
                                                                                                                               tCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCTTCAAt            >  2:1250812/1‑141 (MQ=255)
                                                                                                                                cGGACAACTG‑AGAAATCTTAAAGATTT‑TTCAGCTGTCCGATATTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTACTTCTGAGTCTTTTGAAGTTTATTTACGGATTTTTCTCATTAATTTTTCGTCTTCAAtt           >  2:56772/1‑141 (MQ=37)
                                                                                                                                 ggACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCTTCAATTa          >  2:1403353/1‑141 (MQ=255)
                                                                                                                                     aacTG‑AGAAATCTTAAAGATTT‑TTCAGCTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCTTCAATTAATGa      >  1:1381579/3‑141 (MQ=38)
                                                                                                                                      gCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCTTGAATTCATGAt     >  2:1396080/1‑141 (MQ=255)
                                                                                                                                      gCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCTTCAATTAATGAt     >  1:725328/1‑141 (MQ=255)
                                                                                                                                         g‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCTTCAATTAATGATTCa  <  1:863805/141‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                           
TATACATTAAACTATTTTTTGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTG‑AAAAATCTTTAAGATTT‑CTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCTTCAATTAATGATTCA  >  CP000730/2744066‑2744343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑