Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 821,052 T→A 5.4% intergenic (+129/+60) glxK → / ← pepT glycerate kinase/M20 family peptidase T

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP000730821,0520TA 5.4% 465.5 / 11.8 147intergenic (+129/+60)glxK/pepTglycerate kinase/M20 family peptidase T
Reads supporting (aligned to +/- strand):  ref base T (69/70);  new base A (5/3);  total (74/73)
Fisher's exact test for biased strand distribution p-value = 7.19e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.72e-01

Only 100 of 150 total aligned reads displayed.

TTGAGGTTTAGTAAAGAAGGACTAAATTGGTGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGCTTTTTCCATAACATCAATGGATGCATATTC  >  CP000730/820913‑821192
                                                                                                                                            |                                                                                                                                             
ttGAGGTTTAGTAAAGAAGGACTAAATTGGTGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑CATGtt                                                                                                                                              >  2:727054/1‑141 (MQ=255)
ttGAGGTTTAGTAAAGAAGGACTAAATTGGTGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGtt                                                                                                                                              >  1:81244/1‑141 (MQ=255)
   aGGTTTAGTAAAGAAGGACTAAATTGGTGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGc                                                                                                                                           <  2:1482479/141‑1 (MQ=255)
    ggTTTAGTAAAGAAGGACTAAATTGGTGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCg                                                                                                                                          <  1:1058645/141‑1 (MQ=255)
    ggTTTAGTAAAGAAGGACTAAATTGGTGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCg                                                                                                                                          <  2:160977/141‑1 (MQ=255)
    ggTTTAGTAAAGAAGGACTAAATTGGTGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCg                                                                                                                                          <  2:81244/141‑1 (MQ=255)
     gTTTAGTAAAGAAGGACTAAATTGGTGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGt                                                                                                                                         <  1:973639/141‑1 (MQ=255)
     gTTTAGTAAAGAAGGACTAAATTGGTGATGCTGNCATNATGGTTAATAACAGTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTNAGCGt                                                                                                                                         >  1:543659/1‑141 (MQ=255)
     gTTTAGTAAAGAAGGAATAAATTGGTGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGt                                                                                                                                         <  2:850145/141‑1 (MQ=255)
      tttAGTAAAGAAGGACTAAATTGGTGAGGCTGTCATGATGGTGAATAACATTTATGATGGTTAGAAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTg                                                                                                                                        <  2:513313/141‑1 (MQ=255)
       ttAGTAAAGAAGGGCTAAATTGGTGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTAACATT‑CAGTGCAATGATAGCGTGa                                                                                                                                       <  1:635428/141‑1 (MQ=38)
       ttAGTAAAGAAGGACTAAATTGGTGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGa                                                                                                                                       >  2:71126/1‑141 (MQ=255)
         aGTAAAGAAGGACTAAATTGGTGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGAtt                                                                                                                                     >  1:94511/1‑141 (MQ=255)
            aaaGAAGGACTAAATTGGTGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGAttttt                                                                                                                                  <  1:1337997/141‑1 (MQ=255)
             aagaagGAATGTATTGGTGATGCTGTCATGATGGTGAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTt‑a                                                                                                                                <  2:243859/141‑1 (MQ=255)
              agaagGACTAAATTGCTGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTt‑at                                                                                                                               <  1:1377636/141‑1 (MQ=255)
               gaagGACTAAATTGGTGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTt‑ata                                                                                                                              >  2:914280/1‑141 (MQ=255)
               gaagGACTAAATTGGTGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTAACATT‑CAGTGCAATGATAGCGTGAtttttcat                                                                                                                               <  1:861406/141‑4 (MQ=37)
                aagGACTAAATTGGTGATGCTGACATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTt‑atat                                                                                                                             <  2:924247/141‑1 (MQ=255)
                    aCTAAATTGGTGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAGACGAATTAGAAGATCGAAAGTGTACGTAAAAAATATGAAAAATCACGCTCTCATAGCACTG‑AACGTTAGCGTGATTTTT‑ATATatta                                                                                                                         >  2:795717/1‑141 (MQ=255)
                       aaaTTGGTGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAACGTGATTTTT‑ATATattaatt                                                                                                                      >  2:131926/1‑141 (MQ=255)
                        aaTTGGTGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATattaatta                                                                                                                     <  1:637118/141‑1 (MQ=255)
                        aaTTGGTGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATattaatta                                                                                                                     >  2:1549997/1‑141 (MQ=255)
                            ggTGATGCTGTCATTATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGcc                                                                                                                 <  1:1397265/141‑1 (MQ=255)
                              tGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTg                                                                                                               >  2:975517/1‑141 (MQ=255)
                              tGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTg                                                                                                               >  1:680806/1‑141 (MQ=255)
                               gATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGa                                                                                                              <  2:1573541/141‑1 (MQ=255)
                                 tGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGt                                                                                                            >  2:528639/1‑141 (MQ=255)
                                 tGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGt                                                                                                            <  2:798399/141‑1 (MQ=255)
                                        atgatgGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑ACAGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTa                                                                                                     >  1:1263799/1‑141 (MQ=255)
                                         tgatgGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAg                                                                                                    <  2:657861/141‑1 (MQ=255)
                                             ggTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGtata                                                                                                <  2:205763/141‑1 (MQ=255)
                                               ttAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGtatata                                                                                              >  2:1201402/1‑141 (MQ=255)
                                               ttAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGtatata                                                                                              <  2:973251/141‑1 (MQ=255)
                                                taataaCATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATaa                                                                                             <  1:528639/141‑1 (MQ=255)
                                                taataaCATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATaa                                                                                             <  2:138129/141‑1 (MQ=255)
                                                  ataaCATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAACTCACGCTATCCTTGCACTG‑AATATAAGAGTGATATTT‑ATATATTAATTAAGCCTGCGTTGAACTAGTATATAATc                                                                                           >  1:1485371/1‑141 (MQ=255)
                                                  ataaCATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATc                                                                                           <  2:612069/141‑1 (MQ=255)
                                                  ataaCATTTATGATGGTTAGCAAAACGAATTAGAACATCGAAAGTAGACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATc                                                                                           >  1:1447139/1‑141 (MQ=255)
                                                    aaCATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGt                                                                                         <  1:1565738/141‑1 (MQ=255)
                                                    aaCATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCCGAGTTGAACTAGTATATAATCGt                                                                                         <  1:1334087/141‑1 (MQ=255)
                                                      cATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTg                                                                                       >  2:229850/1‑141 (MQ=255)
                                                       agttATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTgg                                                                                      >  2:508799/3‑141 (MQ=255)
                                                       aTTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTgg                                                                                      <  2:301474/141‑1 (MQ=255)
                                                          tATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGttt                                                                                   >  1:1236069/1‑141 (MQ=255)
                                                          tATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGttt                                                                                   <  1:1251646/141‑1 (MQ=255)
                                                          tATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGttt                                                                                   <  2:247022/141‑1 (MQ=255)
                                                            tgatgGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGttttt                                                                                 <  2:825546/141‑1 (MQ=255)
                                                            tgatgGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGttttt                                                                                 >  1:786160/1‑141 (MQ=255)
                                                             gatgGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTa                                                                                >  2:1617414/1‑141 (MQ=255)
                                                                      cAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTc                                                                       <  2:627553/141‑1 (MQ=255)
                                                                        aaaCGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAg                                                                     <  2:194541/141‑1 (MQ=255)
                                                                        aaaCGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAg                                                                     <  1:1624008/141‑1 (MQ=255)
                                                                        aaaCGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAg                                                                     >  2:147456/1‑141 (MQ=255)
                                                                             aaTTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGata                                                                >  1:645618/1‑141 (MQ=255)
                                                                                tAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATAtct                                                             >  2:281463/1‑141 (MQ=255)
                                                                                  gaagaTCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATAtcttc                                                           >  1:261550/1‑141 (MQ=255)
                                                                                     gaTCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTAc                                                        <  2:1211869/141‑1 (MQ=255)
                                                                                     gaTCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTAc                                                        <  1:1321983/141‑1 (MQ=255)
                                                                                     gaTCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATAAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATAtcttcttc                                                        >  2:879577/1‑139 (MQ=255)
                                                                                       tCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACaa                                                      >  1:462391/1‑141 (MQ=255)
                                                                                       tCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACaa                                                      >  1:18675/1‑141 (MQ=255)
                                                                                        cGAAAGTATACGTAAAAAATATGAAAAATCAGGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATAtcttc                                                           >  2:742092/1‑135 (MQ=255)
                                                                                        cGAAAGTATACGTAAAAAATATGAAAAATCAGGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATAtcttc                                                           <  1:742092/135‑1 (MQ=255)
                                                                                           aaGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTcc                                                  >  1:727525/1‑141 (MQ=255)
                                                                                              tataCGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAAt                                               >  2:740807/1‑141 (MQ=255)
                                                                                                taCGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGa                                             <  2:637678/141‑1 (MQ=255)
                                                                                                   gTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTa                                          >  2:1180817/1‑141 (MQ=255)
                                                                                                         aaTATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGa                                             <  1:203897/132‑1 (MQ=255)
                                                                                                         aaTATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTa                                    <  1:1279347/141‑1 (MQ=255)
                                                                                                         aaTATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑‑T‑TATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTTGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACt                                  <  2:938610/141‑1 (MQ=255)
                                                                                                          atatGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTAc                                   <  1:866765/141‑1 (MQ=255)
                                                                                                            atGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTg                                 >  1:601251/1‑141 (MQ=255)
                                                                                                             tGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCaa                                                <  2:311855/125‑1 (MQ=255)
                                                                                                             tGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGc                                >  1:1143369/1‑141 (MQ=255)
                                                                                                             tGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGc                                >  2:274574/1‑141 (MQ=255)
                                                                                                             tGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGc                                <  1:1531378/141‑1 (MQ=255)
                                                                                                              gAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGCt                               >  1:354130/1‑141 (MQ=255)
                                                                                                              gAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGCt                               >  2:1317879/1‑141 (MQ=255)
                                                                                                              gAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCATTGGTTTTTAGTGATTTTCAGCGATATCTTCTACGATTCCAATGATTACTTGTACTGCt                               >  1:432281/1‑141 (MQ=255)
                                                                                                                  aaTCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGCttttt                           <  2:498831/141‑1 (MQ=255)
                                                                                                                  aaTCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGCttttt                           <  2:1445294/141‑1 (MQ=255)
                                                                                                                     cACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGACTTTCAGCGCTATCTTCTACACTTCCAATGATTACTTGTACTGCTTTTTCCa                        <  2:414343/141‑1 (MQ=255)
                                                                                                                      aCGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATCTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGCTTTTTCCAt                       <  1:613490/141‑1 (MQ=255)
                                                                                                                       cGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGCTTTTTCCATa                      >  1:1121676/1‑141 (MQ=255)
                                                                                                                       cGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGCTTTTTCCATa                      >  2:406797/1‑141 (MQ=255)
                                                                                                                       cGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGCTTTTTCCATa                      >  2:1592561/1‑141 (MQ=255)
                                                                                                                        gCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGCTTTTTCCATaa                     >  1:1012600/1‑141 (MQ=255)
                                                                                                                        gCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGCTTTTTCCATaa                     >  1:1454308/1‑141 (MQ=255)
                                                                                                                        gCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGCTTTTTCCATaa                     <  1:27363/141‑1 (MQ=255)
                                                                                                                        gCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGCTTTTTCCATaa                     >  2:1381576/1‑141 (MQ=255)
                                                                                                                         cTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGCTTTTTCCATAAc                    <  1:147456/141‑1 (MQ=255)
                                                                                                                              aTTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGCTTTTTCCATAACATCaa               <  2:1232296/141‑1 (MQ=255)
                                                                                                                                 tcagtgcaaTGATAGCGTGATTTTTCATATTTTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGCTTTTTCCATAACATCAAt              >  1:1076367/8‑141 (MQ=255)
                                                                                                                                   aCTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGCTTTTTCCATAACATCAATGGAt          >  2:910398/1‑141 (MQ=255)
                                                                                                                                     tG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAGTTCCAATGATTACTTGTACTGCTTTTTCCATAACATCAATGGATGc        <  1:1637674/141‑1 (MQ=255)
                                                                                                                                         aTGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGCTTTTTCCATAACATCAATGGATGCata     >  1:1095976/1‑141 (MQ=255)
                                                                                                                                         aTGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGCTTTTTCCATAACATCAATGGATGCata     >  1:479859/1‑141 (MQ=255)
                                                                                                                                         aTGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGCCTTTTCCATAACATCAATGGATGCata     >  2:1417505/1‑141 (MQ=255)
                                                                                                                                            ttAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGCTTTTTCCATAACATCAATGGATGCATATTc  >  1:1105303/1‑141 (MQ=255)
                                                                                                                                            |                                                                                                                                             
TTGAGGTTTAGTAAAGAAGGACTAAATTGGTGATGCTGTCATGATGGTTAATAACATTTATGATGGTTAGCAAAACGAATTAGAAGATCGAAAGTATACGTAAAAAATATGAAAAATCACGCTATCATTGCACTG‑AATGTTAGCGTGATTTTT‑ATATATTAATTAAGCCTGAGTTGAACTAGTATATAATCGTTGGTTTTTAGTGATTTTCAGCGATATCTTCTACAATTCCAATGATTACTTGTACTGCTTTTTCCATAACATCAATGGATGCATATTC  >  CP000730/820913‑821192

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑