| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 1885475 = | 74 (0.920) | 8 (0.110) | 7/252 | 9.8 | 10.1% | intergenic (‑257/+69) | fmtB1/USA300HOU_1748 | cell surface anchored protein/possible rhodanese domain sulfurtransferase |
| ? | CP000730 | 1885505 = | 73 (0.970) | intergenic (‑287/+39) | fmtB1/USA300HOU_1748 | cell surface anchored protein/possible rhodanese domain sulfurtransferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AATGGCATTGATGCCGTAAATGTCGAAGGCGGCATGCACGCATGGGGCGATGAAGGTTTGGAAATAAAAAGTATTTAAAGTAGTGACATAATTTAAAATAATATTACATTTGTAATGACACCAAGTAACGTTTCGGTTGCTTGGTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1885621‑1885475‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttggtgtCATTACAAATGTAATATTATTTTAAATTATGTCACTACTTTAAATACTTTTTATTTCCAAACCTTCATCGCCCCATGCGTGCATGCCGCCTTCGACATTTACGGCATCAATGCCATTTGCCTCTAAATATTCTACAACTT > CP000730/1885505‑1885644 AATGGCATTGATGCCGTAAATGTCGAAGGCGGCATGCACGCATGGGGCGATGAAGGTTTGGAAATAAAAAGTATTTAAAGTAGTGACATAATTTAAAATAATATTACATTTGTAATGACACCAAGTAACGTTTCGGTTGCT > 1:615839/1‑141 GGCATTGATGCCGTAAATGTCGAAGGCGGCATGCACGCATGGGGCGATGAAGGTTTGGAAATAAAAAGTATTTAAAGTAGTGACATAATTTAAAATAATATTACATTTGTAATGACACCAAGTAACGTTTCGGTTGCTTGG > 2:22941/1‑141 GGCATTGATGCCGTAAATGTCGAAGGCGGCATGCACGCATGGGGCGATGAAGGTTTGGAAATAAAAAGTATTTAAAGTAGTGACATAATTTAAAATAATATTACATTTGTAATGACACCAAGTAACGTTTCGGTTGCTTGG < 1:463970/141‑1 ATTGATGCCGTAAATGTCGAAGGCGGCATGCACGCATGGGGCGATGAAGGTTTGGAAATAAAAAGTATTTAAAGTAGTGACATAATTTAAAATAATATTACATTTGTAATGACACCAAGTAACGTTTCGGTTGCTTGGTGT > 2:582343/1‑141 ATTGATGCCGTAAATGTCGAAGGCGGCATGCACGCATGGGGCGATGAAGGTTTGGAAATAAAAAGTATTTAAAGTAACCGAATAATTTAAAATAATATTACATTTGTAATGACACCAAGTAACGTTTCGGTTGCTTGGTGT > 1:531360/1‑141 TTTAAAGTAGTGACATAATTTAAAATAATATTACATTTGTAATGACACCAAGTAACGTTTCGGTTGCTTGG > 2:993316/1‑71 TTTAAAGTAGTGACATAATTTAAAATAATATTACATTTGTAATGACACCAAGTAACGTTTCGGTTGCTTGG < 1:993316/71‑1 AAAGTAGTGACATAATTTAAAATAATATTACATTTGTAATGACACCAAGTAACGTTTCGGTTGCTTGGTGTCATTACAAATGTAATATTATTTTAAATTATGTCACTACTTTAAATACTTTTTATTTCCAAACCTTCATCG > 1:232798/1‑141 GTGACATAATTTAAAATAATATTACATTTGTAATGACACCAAGTAACGTTTCGGTTGCTTGGTGTCATTACAAATGTAATATTATTTTAAATTATGTCACTACTTTAAATACTTTTTATTTCCAAACCTTCATCGCCCCAT > 1:212589/1‑141 TAAAATAATATTACATTTGTAATGACACCAAGTAACGTTTCGGTTGCTTGGTGTCATTACAAATGTAATATTATTTTAAATTATGTCACTACTTTAAATACTTTTTATTTCCAAACCTTCATCGCCCCATGCGTGCATGCC < 2:232798/141‑1 AATAATATTACATTTGTAATGACACCAAGTAACGTTTCGGTTGCTTGGTGTCATTACAAATGTAATATTATTTTAAATTATGTCACTACTTTAAATACTTTTTATTTCCAAACCTTCATCGCCCCATGCGTGCATGCCGCC > 1:923585/1‑141 ACATTTGTAATGACACCAAGTAACGTTTCGGTTGCTTGGTGTCATTACAAATGTAATATTATTTTAAATTATGTCACTACTTTAAATACTTTTTATTTCCAAACCTTCATCGCCCCATGCGTGCATGCCGCCTTCGACATT > 1:740626/1‑141 TAATGACACCAAGTAACGTTTCGGTTGCTTGGTGTCATTACAAATGTAATATTATTTTAAATTATGTCACTACTTTAAATACTTTTTATTTCCAAACCTTCATCGCCCCATGCGTGCATGCCGCCTTCGACATTTACGGCA > 2:581586/1‑141 CGTTTCGGTTGCTTGGTGTCATTACAAATGTAATATTATTTTAAATTATGTCACTACTTTAAATACTTTTTATTTCCAAACCTTCATCGCCCCATGCGTGCATGCCGCCTTCGACATTTACGGCATCAATGCCATTTGCCT > 1:314440/1‑141 CGTTTCGGTTGCTTGGTGTCATTACAAATGTAATATTATTTTAAATTATGTCACTACTTTAAATACTTTTTATTTCCAAACCTTCATCGCCCCATGCGTGCATGCCGCCTTCGACATTTACGGCATCAATGCCATTTGCCT > 2:609101/1‑141 TGGTGTCATTACAAATGTAATATTATTTTAAATTATGTCACTACTTTAAATACTTTTTATTTCCAAACCTTCATCGCCCCATGCGTGCATGCCGCCTTCGACATTTACGGCATCAATGCCATTTGCCTCTAAATATTCTAC > 2:577738/1‑141 TGGTGTCATTACAAATGTAATATTATTTTAAATTATGTCACTACTTTAAATACTTTTTATTTCCAAACCTTCATCGCCCCATGCGTGCATGCCGCCTTCGACATTTACGGCATCAATGCCATTTGCCTCTAAATATTCTAC < 1:337482/141‑1 TCATTACAAATGTAATATTATTTTAAATTATGTCACTACTTTAAATACTTTTTATTTCCAAACCTTCATCGCCCCATGCGTGCATGCCGCCTTCGACATTTACGGCATCAATGCCATTTGCCTCTAAATATTCTACAACTT > 2:183967/1‑141 TCATTACAAATGTAATATTATTTTAAATTATGTCACTACTTTAAATACTTTTTATTTCCAAACCTTCATCGCCCCATGCGTGCATGCCGCCTTCGACATTTACGGCATCA > 1:87421/1‑110 TCATTACAAATGTAATATTATTTTAAATTATGTCACTACTTTAAATACTTTTTATTTCCAAACCTTCATCGCCCCATGCGTGCATGCCGCCTTCGACATTTACGGCATCA < 2:87421/110‑1 AATGGCATTGATGCCGTAAATGTCGAAGGCGGCATGCACGCATGGGGCGATGAAGGTTTGGAAATAAAAAGTATTTAAAGTAGTGACATAATTTAAAATAATATTACATTTGTAATGACACCAAGTAACGTTTCGGTTGCTTGGTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1885621‑1885475‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttggtgtCATTACAAATGTAATATTATTTTAAATTATGTCACTACTTTAAATACTTTTTATTTCCAAACCTTCATCGCCCCATGCGTGCATGCCGCCTTCGACATTTACGGCATCAATGCCATTTGCCTCTAAATATTCTACAACTT > CP000730/1885505‑1885644 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |