New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	533277 =	93 (1.160)	6 (0.080)	6/250	10.3	6.4%	intergenic (+2848/‑2877)	veg/rplY	hypothetical protein/ribosomal protein L25
	?	CP000730	= 533297	88 (1.180)					intergenic (+2868/‑2857)	veg/rplY	hypothetical protein/ribosomal protein L25
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTATTTTTGAAGTAAGAAAAAAGTTGTTTTT  >  CP000730/533158‑533435                                                                                                                                             |                                                                                                                                           gATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATg                                                                                                                                           >  2:655653/1‑141 (MQ=255)   tAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGtt                                                                                                                                         <  2:105839/141‑1 (MQ=255)    aaaaaCGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGACGGCAG‑TTTTTTTAGTTTGTATTAATGttt                                                                                                                                        >  1:782852/1‑141 (MQ=255)     aaaaCGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCGTTGTCGGCAG‑TATTTTTAGTTTGTATTAATGtttt                                                                                                                                       <  2:785708/141‑1 (MQ=255)      aaaCGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGttttt                                                                                                                                      <  2:220021/141‑1 (MQ=255)       aaCGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGtttttt                                                                                                                                     <  2:995852/141‑1 (MQ=255)        aCGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGttttttt                                                                                                                                    <  1:281612/141‑1 (MQ=255)             aCATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTtttttatttt                                                                                                                               <  2:757240/141‑1 (MQ=255)             aCATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTtttttatttt                                                                                                                               >  2:171174/1‑141 (MQ=255)               aTCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTtttttattttta                                                                                                                             <  2:513604/141‑1 (MQ=255)                  agaagaTTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTtttttagtttgtatt                                                                                                                          <  2:909668/141‑6 (MQ=255)                     agaTTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGaaa                                                                                                                       >  1:724111/1‑141 (MQ=255)                       aTTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAgg                                                                                                                     <  2:287112/141‑1 (MQ=255)                       aTTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAgg                                                                                                                     <  2:243951/141‑1 (MQ=255)                        ttCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAgg                                                                                                                     <  2:481063/141‑1 (MQ=255)                        ttCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGc                                                                                                                    <  1:981935/141‑1 (MQ=255)                        ttCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGc                                                                                                                    >  2:676913/1‑141 (MQ=255)                         tCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTtttttatttttactccacgcct                                                                                                                   >  2:452676/1‑131 (MQ=255)                         tCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCt                                                                                                                   >  2:168387/1‑141 (MQ=255)                          cAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCta                                                                                                                  >  1:135585/1‑141 (MQ=255)                          cAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCta                                                                                                                  >  1:490148/1‑141 (MQ=255)                          cAGAAGAAGCTTAATAAAGTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCta                                                                                                                  >  1:749906/1‑141 (MQ=255)                              agaagCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCtaataa                                                                                                              <  1:493905/141‑1 (MQ=255)                                    ttAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAatatat                                                                                                        <  2:647808/141‑1 (MQ=255)                                      aaTCANATTAATAGTAAGCGATTTAATAAAATTACCATAAGTTGATTTGATACGGTAGATATATCATAAATCTTTGTCGTCAG‑TTTTTTTAGTTTGTATTAATGTTTNTTTATTTNTAATGAAAGGCTAATAAATATATAc                                                                                                      <  1:93444/141‑1 (MQ=255)                                           aTTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATACATATATACGTTaa                                                                                                 >  2:604327/1‑141 (MQ=255)                                           aTTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTaa                                                                                                 <  1:48158/141‑1 (MQ=255)                                           aTTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTaa                                                                                                 >  1:883840/1‑141 (MQ=255)                                            ttttATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAAc                                                                                                <  1:655653/141‑1 (MQ=255)                                             tttATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACa                                                                                               >  1:697573/1‑141 (MQ=255)                                             tttATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACa                                                                                               <  2:802948/141‑1 (MQ=255)                                                atatTTAGCGATGTAATACCTTCGCAATAAGTTGATTGGATACTGGCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTCGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGAt                                                                                            <  2:97136/141‑1 (MQ=255)                                                atatTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGtagacaatt                                                                                            >  2:192043/1‑133 (MQ=255)                                                  atTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTa                                                                                          >  1:556828/1‑141 (MQ=255)                                                   tttAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTat                                                                                         >  1:990648/1‑141 (MQ=255)                                                   tttAACAATGTAATAAATTTGAAATAAGTTAATTTGATACTGTCGATAAAGCATAAAACTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATTAAAGGCTAAGAAATATATACGTTAACAGATTat                                                                                         <  1:493017/141‑1 (MQ=255)                                                           tGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGatat                                                                                 <  1:536196/141‑1 (MQ=255)                                                            gTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATg                                                                                <  2:232702/141‑1 (MQ=255)                                                            gTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGGCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATg                                                                                <  2:807363/141‑1 (MQ=255)                                                             tAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGttt                                                                                                                                        >  1:93722/1‑84 (MQ=255)                                                             tAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGttt                                                                                                                                        <  2:93722/84‑1 (MQ=255)                                                                 aCATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAat                                                                           >  2:56808/1‑141 (MQ=255)                                                                  cATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAatt                                                                          >  1:996441/1‑141 (MQ=255)                                                                    tttGAAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAattat                                                                        <  1:636620/141‑1 (MQ=255)                                                                             aGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTATGGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCAtt                                                               >  1:761033/1‑141 (MQ=255)                                                                             aGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCAtt                                                               >  1:209903/1‑141 (MQ=255)                                                                             aGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCAtt                                                               >  2:735670/1‑141 (MQ=255)                                                                                  atttgatACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGa                                                          >  1:937625/1‑141 (MQ=255)                                                                                   tttgatACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATACACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGAt                                                         >  2:695967/1‑141 (MQ=255)                                                                                    ttgatACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTTTTTTTTTTGAAAGGTTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTTATTGCtttta                                                        >  2:278892/1‑137 (MQ=255)                                                                                          cTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAAtt                                                  <  1:390403/141‑1 (MQ=255)                                                                                             tCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCg                                               <  2:342365/141‑1 (MQ=255)                                                                                             tCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCg                                               >  2:459504/1‑141 (MQ=255)                                                                                               gATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATTAAAATTATTGATTCATTGCTGATAAAAATTGCGtt                                             >  1:998796/1‑141 (MQ=255)                                                                                                  aaagcataaagcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGc                                                             <  1:923666/122‑1 (MQ=255)                                                                                                  aaagcataaagcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGc                                                             <  1:923665/122‑1 (MQ=255)                                                                                                  aaagcataaagcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGc                                                             <  1:923797/122‑1 (MQ=255)                                                                                                  aaagcataaagcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGc                                                             >  2:923665/1‑122 (MQ=255)                                                                                                  aaagcataaagcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGc                                                             >  2:923797/1‑122 (MQ=255)                                                                                                  aaagcataaagcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGc                                                             >  2:923666/1‑122 (MQ=255)                                                                                                    agcataaagcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAat                                        >  1:830480/1‑141 (MQ=255)                                                                                                      ctttatgcTTTATCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAatga                                      >  1:534276/7‑141 (MQ=255)                                                                                                      ctttatgcTTTATCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAatga                                      >  1:591681/7‑141 (MQ=255)                                                                                                      cataaagcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAatga                                      >  2:692800/1‑141 (MQ=255)                                                                                                       tttatgcTTTATCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACa                                                                                               >  2:571708/6‑83 (MQ=255)                                                                                                       tttatgcTTTATCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACa                                                                                               <  1:571708/78‑1 (MQ=255)                                                                                                         aaagcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTTTTTTTTTTTAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGc                                   >  2:106136/1‑141 (MQ=255)                                                                                                         aaagcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCATTTGAATGATGc                                   >  1:315754/1‑141 (MQ=255)                                                                                                           agcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTTTTTTTTTTTAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTc                                 >  2:49155/1‑141 (MQ=255)                                                                                                           agcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTc                                 >  1:75170/1‑141 (MQ=255)                                                                                                             tttgtattaatg‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTTATTGCTGATAAAAATTGCGTTTGAATGATGCTCGt                               >  2:403108/12‑141 (MQ=255)                                                                                                             cTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCGTTGCTGATAAAAATTGCGTTTGAATGATGCTCGt                               >  1:559984/1‑141 (MQ=255)                                                                                                             cTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGt                               <  2:649424/141‑1 (MQ=255)                                                                                                             cTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGt                               <  2:724111/141‑1 (MQ=255)                                                                                                              tttGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTa                              <  1:876393/141‑1 (MQ=255)                                                                                                               ttGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTggggaagaattgttt                             >  2:552047/1‑127 (MQ=255)                                                                                                               ttGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAt                             >  2:106199/1‑141 (MQ=255)                                                                                                               ttGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGAGTTTGAATGATGATAGTAt                             >  1:302772/1‑141 (MQ=255)                                                                                                                 gTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAttt                           >  2:115664/1‑141 (MQ=255)                                                                                                                 gTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAttt                           >  2:626611/1‑141 (MQ=255)                                                                                                                 gTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAttt                           >  1:138437/1‑141 (MQ=255)                                                                                                                 gTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAttt                           >  2:523856/1‑141 (MQ=255)                                                                                                                  tCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAtttt                          >  1:237145/1‑141 (MQ=255)                                                                                                                  tCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAtttt                          <  1:172697/141‑1 (MQ=255)                                                                                                                  tCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAtttt                          >  2:364408/1‑141 (MQ=255)                                                                                                                          tttttttAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTATTTTTGAAGTa                   <  2:639881/141‑1 (MQ=255)                                                                                                                          tttttttAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTATTTTTGAAGTa                   <  1:757879/141‑1 (MQ=255)                                                                                                                              tttAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTATTTTTGAAGTAAGaa               >  1:968663/1‑141 (MQ=255)                                                                                                                              tttAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTATTTTTGAAGTAAGaa               <  2:422303/141‑1 (MQ=255)                                                                                                                               ttttttttttttAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTTATTTTTGTTAAAAATTGCGTTTGAATGATGCTCGTATTTTTGAAGTAAGaaa              >  2:574328/11‑141 (MQ=255)                                                                                                                               ttAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGt                               <  2:693148/124‑1 (MQ=255)                                                                                                                               ttAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGt                               >  1:693148/1‑124 (MQ=255)                                                                                                                                tAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTATTTTTGAAGTAAGaaaa             <  1:887276/141‑1 (MQ=255)                                                                                                                                 aGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGATCGTATTTTTTAAGTAAGaaaaa            >  2:753511/1‑141 (MQ=255)                                                                                                                                  gTTTGTATTAATGTTTTTTTTTTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTTCTTTTTAATGATGCTCGTATTTTTTAAGTAAGaaaaaa           >  2:785137/1‑141 (MQ=255)                                                                                                                                   tttGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTATTTTTGAAGTAAGAAAAAAg          >  1:94800/1‑141 (MQ=255)                                                                                                                                     tGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTTATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTATTTTTGAAGTAAGAAAAAAgtt        <  1:489687/141‑1 (MQ=255)                                                                                                                                       tATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTATTTTAAAAAAAAAAAAAAAgttgt      <  2:937625/141‑1 (MQ=255)                                                                                                                                           aaTGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAGAATTATTGATTTATTGCTGATAATAATTGCGTTTGAATGATGCTCGTATAATTGTAGTAAGAAAAAAGTTGttttt  >  2:123866/1‑141 (MQ=255)                                                                                                                                             |                                                                                                                                           GATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTATTTTTGAAGTAAGAAAAAAGTTGTTTTT  >  CP000730/533158‑533435

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.