New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 885389	50 (0.560)	5 (0.060)	4/232	NT	9.3%	intergenic (+18/+55)	gpmA1/yisU	phosphoglycerate mutase/LysE family L‑lysine exporter
	?	CP000730	= 885408	52 (0.650)					intergenic (+37/+36)	gpmA1/yisU	phosphoglycerate mutase/LysE family L‑lysine exporter

TTAAGATATTGCCTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTA  >  CP000730/885249‑885529                                                                                                                                             |                                                                                                                                              ttAAGATATTGCCTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCTTTATACA                                                                                                                                               <  1:858156‑M1/141‑1 (MQ=255) ttAAGATATTGCCTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACA                                                                                                                                               <  2:744713‑M1/141‑1 (MQ=255) ttAAGATATTGCCTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACA                                                                                                                                               <  1:336474‑M1/141‑1 (MQ=255)  tAAGATATTGCCTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAt                                                                                                                                              >  2:15166/1‑141 (MQ=255)   aaGATATTGCCTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATa                                                                                                                                             <  1:630231/141‑1 (MQ=255)   aaGATATTGCCTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATa                                                                                                                                             <  1:128908/141‑1 (MQ=255)   aaGATATTGCCTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATa                                                                                                                                             <  1:630210/141‑1 (MQ=255)   aaGATATTGCCTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATa                                                                                                                                             <  2:578480/141‑1 (MQ=255)         ttGCCTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GAcaca                                                                                                                                      >  1:462984/1‑141 (MQ=255)          tGCCTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACaa                                                                                                                                     <  1:869145/141‑1 (MQ=255)            ccTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAaaagacatact                                                                                                                                    <  1:192785‑M1/141‑12 (MQ=255)            ccTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAaaagacatact                                                                                                                                    <  1:517236‑M1/141‑12 (MQ=255)            ccTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGt                                                                                                                                   <  1:434888/141‑1 (MQ=255)            ccTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGt                                                                                                                                   <  2:118663/141‑1 (MQ=255)              ttAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTAt                                                                                                                                 <  1:516334/141‑1 (MQ=255)              ttAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTAt                                                                                                                                 >  1:514917/1‑141 (MQ=255)              ttAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTAt                                                                                                                                 >  1:586925/1‑141 (MQ=255)                  aCTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCt                                                                                                                             <  2:743143/141‑1 (MQ=255)                     aGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAaaagacatacttgtgtctat                                                                                                                           <  2:384428‑M1/141‑21 (MQ=255)                     aGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTt                                                                                                                          <  2:509538‑M2/141‑2 (MQ=255)                     aGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTt                                                                                                                          <  1:201736‑M2/141‑2 (MQ=255)                          aaGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtata                                                                                                                     >  2:251907‑M2/1‑135 (MQ=255)                          aaGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAAGATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtata                                                                                                                     >  1:117008‑M2/1‑135 (MQ=255)                               ttAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtataacgct                                                                                                                >  1:600750‑M2/1‑130 (MQ=255)                                tAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAaaagacatacttgtgtctatgtataacgctt                                                                                                                <  2:233736‑M1/141‑32 (MQ=255)                                 aaaGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtatcacgcttt                                                                                                              >  1:861038‑M2/1‑128 (MQ=255)                                 aaaGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtataacgcttt                                                                                                              >  1:171107‑M2/1‑128 (MQ=255)                                 aaaGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtataacgcttt                                                                                                              <  2:838675‑M2/141‑14 (MQ=255)                                   aGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTGGTGTTAATTGGTCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTa                                                                                                            >  1:648155/1‑141 (MQ=255)                                       taataTCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAAt                                                                                                        >  1:352830/1‑141 (MQ=255)                                        aataTCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAAAAGACATACTTGTGTCTATgtataacgctttatttatt                                                                                                        >  1:420072‑M2/1‑122 (MQ=255)                                              ggTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTa                                                                                                 >  1:241905/1‑141 (MQ=255)                                                 aaTTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACAt                                                                                              <  2:383367/141‑1 (MQ=255)                                                  aTTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATa                                                                                             >  1:441256/1‑141 (MQ=255)                                                    tGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCGTTTTTATAACGCTTTTAAAATACAACTACATAAc                                                                                           <  1:303964/141‑1 (MQ=255)                                                        atatCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCtt                                                                                       >  1:48795/1‑141 (MQ=255)                                                         tatCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCttt                                                                                      <  2:611765/141‑1 (MQ=255)                                                           tCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAg                                                                                    <  1:288562/141‑1 (MQ=255)                                                            ccTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGa                                                                                   <  1:595228/141‑1 (MQ=255)                                                            ccTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGa                                                                                   <  1:148353/141‑1 (MQ=255)                                                            ccTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGa                                                                                   <  1:119293/141‑1 (MQ=255)                                                               gAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGaata                                                                                <  1:174170/141‑1 (MQ=255)                                                                     tGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAAtt                                                                          >  1:1034440/1‑141 (MQ=255)                                                                     tGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAAtt                                                                          >  2:156/1‑141 (MQ=255)                                                                       aaTATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGa                                                                        >  1:592270/1‑141 (MQ=255)                                                                       aaTATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGa                                                                        >  2:200555/1‑141 (MQ=255)                                                                       aaTATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGa                                                                        >  2:97084/1‑141 (MQ=255)                                                                       aaTATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGa                                                                        >  2:1079417/1‑141 (MQ=255)                                                                        atacGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATACAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGaa                                                                       >  2:336011/1‑141 (MQ=255)                                                                                  ggAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTg                                                             >  1:62517/1‑141 (MQ=255)                                                                                   gAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTACGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGt                                                            <  1:478030/141‑1 (MQ=255)                                                                                     aCATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATCAAACTCGAATAAGTTTTTGTaa                                                          >  1:825790/1‑141 (MQ=255)                                                                                     aCATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTaa                                                          >  1:512682/1‑141 (MQ=255)                                                                                       aTTTAAATTTGTTGAGTTAATTGCTCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATAAAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAata                                                        <  2:648155/141‑1 (MQ=255)                                                                                             aTTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATAtcatca                                                  >  1:107937/1‑141 (MQ=255)                                                                                                 gttgAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGc                                              >  1:345596/1‑141 (MQ=255)                                                                                                           ttGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACaataata                                    <  1:773060/141‑1 (MQ=255)                                                                                                              aTCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAatt                                 >  2:1065384/1‑141 (MQ=255)                                                                                                              aTCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAatt                                 <  2:347038/141‑1 (MQ=255)                                                                                                              aTCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAatt                                 >  2:238717/1‑141 (MQ=255)                                                                                                                   aaTTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATtattat                            >  2:971367/1‑141 (MQ=255)                                                                                                                   aaTTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATtattat                            >  2:247683/1‑141 (MQ=255)                                                                                                                    aTTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATg                           <  1:770680/141‑1 (MQ=255)                                                                                                                      ttATAATAAATAAAGCGTTATACATA‑GAAACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCt                         <  2:1014309/141‑1 (MQ=255)                                                                                                                         taataaATAAAGCGTTATACATA‑GACACCAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTGTGTAATATCATCTGAGGAACAATAATAATTATTATGCTTGa                      <  2:652582/141‑1 (MQ=255)                                                                                                                         taataaATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGa                      <  2:251809/141‑1 (MQ=255)                                                                                                                          aataaataAAGCGTTATACtagacacaagtatgtcttttgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatatt                       >  1:420072‑M1/1‑20 (MQ=255)                                                                                                                           ataaataaAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGata                    <  2:119967/141‑1 (MQ=255)                                                                                                                           ataaataaAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGata                    >  1:344365/1‑141 (MQ=255)                                                                                                                                taaaGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTa               >  1:714156/1‑141 (MQ=255)                                                                                                                                 aaaGCGTTATACAaaagacatacttgtgtctatgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatattatgcttt               <  2:838675‑M1/141‑129 (MQ=255)                                                                                                                                 aaaGCGTTATACAaaagacatacttgtgtctatgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatattatgcttt               >  1:171107‑M1/1‑13 (MQ=255)                                                                                                                                 aaaGCGTGATACAaaagacatacttgtgtctatgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatattatgcttt               >  1:861038‑M1/1‑13 (MQ=255)                                                                                                                                  aaGCGTTATACATA‑GACACAAGTATGTCTTTtgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatattatgcttta             <  2:233736‑M2/141‑111 (MQ=255)                                                                                                                                  aaGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTAtt             <  2:794837/141‑1 (MQ=255)                                                                                                                                   aGCGTTATACAaaagacatacttgtgtctatgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatattatgctttaa             >  1:600750‑M1/1‑11 (MQ=255)                                                                                                                                        tataCAaaagacatacttgtgtctatgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatcttcaaatttcaggatattacaattaccgatattatgctttaatgctt        >  1:117008‑M1/1‑6 (MQ=255)                                                                                                                                        tataCAaaagacatacttgtgtctatgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatattatgctttaatgctt        >  2:251907‑M1/1‑6 (MQ=255)                                                                                                                                        tataCATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGattat       <  1:620063/141‑1 (MQ=255)                                                                                                                                         ataCATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGattatt      >  1:558578/1‑141 (MQ=255)                                                                                                                                          taCATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTg     <  2:394493/141‑1 (MQ=255)                                                                                                                                             aaaagacatacttgtgtctatgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatattatgctttaatgcttcatct   <  1:201736‑M1/141‑141 (MQ=255)                                                                                                                                             aaaagacatacttgtgtctatgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatattatgctttaatgcttcatct   <  2:509538‑M1/141‑141 (MQ=255)                                                                                                                                             aTA‑GACACAAGTATGTCTTTtgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatattatgctttaatgcttcatct  <  2:384428‑M2/141‑122 (MQ=255)                                                                                                                                             |                                                                                                                                              TTAAGATATTGCCTTAAACTAGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTA  >  CP000730/885249‑885529

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.