BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	1072168 =	94 (1.060)	5 (0.060)	3/256	NT	5.5%	intergenic (‑640/+165)	iraE/folD	possible chitinase/bifunctional methylenetetrahydrofolate dehydrogenase (NADP(+))/methenyltetrahydrofolate cyclohydrolase
*	?	CP000730	2716787 =	79 (0.900)	5 (0.060)	3/256	NT	5.5%	intergenic (+95/+55)	ynzC/USA300HOU_2569	hypothetical protein/possible lactoylglutatione lyase

Only 100 of 105 total aligned reads displayed.

TTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCAACTACTGCCATTATAACTTTGTAGAGCAT  >  CP000730/1072028‑1072305

ttCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAg                                                                                                                                            <  1:772259/141‑1 (MQ=255)

ttCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCATTACAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAg                                                                                                                                            <  1:246562/141‑1 (MQ=255)

   aaaGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGa                                                                                                                                         <  1:365107/141‑1 (MQ=255)

     aGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGt                                                                                                                                       >  2:159722/1‑141 (MQ=255)

         ttCATTTATTCAATGTCTACTTTGAAGTGAGCATTTGATCGTTTATTGGCCCAGATTTTTCTTGTGATTCAGTTCTATTGCAAAATAATATTTAATGTGGGTTAAAAGTCTTTATTAAAACTCAGTTATTAGGGATTGGGa                                                                                                                                   >  1:923715/1‑141 (MQ=255)

         ttCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGa                                                                                                                                   <  2:838872/141‑1 (MQ=255)

         ttCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGa                                                                                                                                   >  1:567822/1‑141 (MQ=255)

           cATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACa                                                                                                                                 <  1:128730/141‑1 (MQ=255)

                aTTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAAt                                                                                                                            <  1:367148/141‑1 (MQ=255)

                  tCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGa                                                                                                                          >  1:254442/1‑141 (MQ=255)

                  tCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGa                                                                                                                          >  1:1025329/1‑141 (MQ=255)

                   cAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGat                                                                                                                         >  1:313358/1‑141 (MQ=255)

                     aTGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGatat                                                                                                                       >  2:732606/1‑141 (MQ=255)

                     aTGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGatat                                                                                                                       >  2:136577/1‑141 (MQ=255)

                       gTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATAttt                                                                                                                     >  2:886679/1‑141 (MQ=255)

                          tACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCg                                                                                                                  >  1:524979/1‑141 (MQ=255)

                           aCTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGt                                                                                                                 <  1:45516/141‑1 (MQ=255)

                             tttGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTaa                                                                                                               <  1:532004/141‑1 (MQ=255)

                                   gggAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAattta                                                                                                         >  2:150165/1‑141 (MQ=255)

                                      aGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAatttattt                                                                                                      >  1:425488/1‑141 (MQ=255)

                                           ttGATCGATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTtcgtcg                                                                                                 <  1:582728/141‑1 (MQ=255)

                                             gATCGATTAATGTCCCAGATTTTACTTGTTATTCATTGCAATTGCAACACAATATTTAGCGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTACAATCTATTtcgcggtc                                                                                               >  2:491156/1‑136 (MQ=38)

                                               tCGATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGAccc                                                                                             >  1:177545/1‑141 (MQ=255)

                                                 gATTTATTTCTCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTATTACTCAGTTATTAGGGAGTGTGACAGAAATGATATTTTCGTATAATTTATTTCGTCGTCCCAc                                                                                           <  2:1061538/141‑1 (MQ=38)

                                                 gATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCAc                                                                                           <  2:831810/141‑1 (MQ=255)

                                                 gATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCAc                                                                                           >  2:238788/1‑141 (MQ=255)

                                                   ttAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCAccc                                                                                         >  1:476792/1‑141 (MQ=255)

                                                      tgtacaccattttaattttttagtctgctaaaatgaaattctcaaaagaataaataaaaagcccatacagagatgaagtttaatgtGGGAGGGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCgg                                                                                      >  2:644345‑M1/87‑141 (MQ=255)

                                                      aTGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCgg                                                                                      <  2:313249/141‑1 (MQ=255)

                                                      aTGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTAGTTCGTCGTCCCAACCCgg                                                                                      >  2:578631/1‑141 (MQ=255)

                                                      aTGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTCATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCgg                                                                                      <  2:74907/141‑1 (MQ=255)

                                                           ccAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAgg                                                                                 >  2:13717/1‑141 (MQ=255)

                                                           ccAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAgg                                                                                 >  1:1012709/1‑141 (MQ=255)

                                                           ccAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAgg                                                                                 <  2:828433/141‑1 (MQ=255)

                                                               aTTTTTCTTGTTATTCATTGCAATTGCACAATAAACACTAGTGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGCTGa                                                                             >  1:845993/1‑141 (MQ=25)

                                                                 ttttCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACt                                                                           <  2:187274/141‑1 (MQ=255)

                                                                 ttttCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACt                                                                           <  1:898499/141‑1 (MQ=255)

                                                                  tttCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTa                                                                          >  2:308682/1‑141 (MQ=255)

                                                                    tCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGa                                                                        >  1:936848/1‑141 (MQ=255)

                                                                    tCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGa                                                                        >  2:615778/1‑141 (MQ=255)

                                                                    tCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGa                                                                        >  2:442215/1‑141 (MQ=255)

                                                                    tCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCATAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGa                                                                        >  2:1038324/1‑141 (MQ=255)

                                                                     cTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGaa                                                                       >  1:610984/1‑141 (MQ=255)

                                                                      ttGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAAt                                                                      <  1:816387/141‑1 (MQ=255)

                                                                      ttGCTATGCATTGCTATCGCCAACCAATATTTAATTTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAACTTTATTTCGTCGTCCTACCCCGGCAAGGTTGACTAGAAt                                                                      >  2:544544/1‑141 (MQ=21)

                                                                       tGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAAtt                                                                     >  2:1061751/1‑141 (MQ=255)

                                                                         ttagtctgctaaaatgaaattctcaaaagaataaataaaaagcccatacagagatgaagtttaatgtGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGa                                                                   >  2:11061‑M1/68‑141 (MQ=255)

                                                                         ttagtctgctaaaatgaaattctcaaaagaataaataaaaagcccatacagagatgaagtttaatgtGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGa                                                                   >  2:11069‑M1/68‑141 (MQ=255)

                                                                          ttttttttgcaatagcaaAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACATATATGTTATTTTCGTAAAATTTATTTCGTCGTACCACCCCGACAAGGTTGACTAGAATTGaa                                                                  >  2:1027683/7‑141 (MQ=38)

                                                                          tATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCTTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGaa                                                                  <  1:236511/141‑1 (MQ=255)

                                                                           aTTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGaaa                                                                 >  1:62224/1‑141 (MQ=255)

                                                                               attgcaattgcaAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑g                                                            <  2:842258/141‑1 (MQ=255)

                                                                                  gcaattgcaaAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTTAAATTTATTTCGTCGTCCCACCCCGGCTAGGTTGACTAGAATTGAAAAAA‑GCtt                                                         >  2:861312/1‑141 (MQ=255)

                                                                                     attgcaaAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGtt                                                      >  2:405781/1‑141 (MQ=255)

                                                                                        tcacaggaataTTTGAGGTTGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAATGTTGACTAGAATTGCAAATT‑GCTTGTTACa                                                   <  2:856190/134‑1 (MQ=18)

                                                                                        gcaaAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACa                                                   >  1:517792/1‑141 (MQ=255)

                                                                                        gcaaAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTAATTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACa                                                   >  2:909973/1‑141 (MQ=255)

                                                                                         caaAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACaa                                                  >  1:366898/1‑141 (MQ=255)

                                                                                         caaAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACaa                                                  >  2:500061/1‑141 (MQ=255)

                                                                                          aaaaTAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAg                                                 <  1:1005519/141‑1 (MQ=255)

                                                                                          aaaaTAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAg                                                 <  1:375919/141‑1 (MQ=255)

                                                                                           aaaTAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGc                                                >  2:52789/1‑141 (MQ=255)

                                                                                             ataataTTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGa                                              >  2:689148/1‑141 (MQ=255)

                                                                                               aataTTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAATTCGCTTGTAACAAGcttt                                             <  1:678078/141‑4 (MQ=21)

                                                                                               aataTTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAAt                                            <  1:289262/141‑1 (MQ=255)

                                                                                                  atTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGtt                                                                               <  2:614029/104‑1 (MQ=255)

                                                                                                  atTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGtt                                                                               >  1:614029/1‑104 (MQ=255)

                                                                                                  atTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAAtttt                                         <  2:567822/141‑1 (MQ=255)

                                                                                                   tttAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTc                                        >  2:467898/1‑141 (MQ=255)

                                                                                                    ttAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCg                                       >  2:64757/1‑141 (MQ=255)

                                                                                                     tAATGTGGGTTAAAAGAGTTCATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGt                                      >  2:74721/1‑141 (MQ=255)

                                                                                                     tAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGt                                      >  1:427795/1‑141 (MQ=255)

                                                                                                     tAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGt                                      <  2:657749/141‑1 (MQ=255)

                                                                                                     tAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAACGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGt                                      >  1:853647/1‑141 (MQ=255)

                                                                                                       aTGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTc                                    >  2:556498/1‑141 (MQ=255)

                                                                                                           gggTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTc                                >  2:724980/1‑141 (MQ=255)

                                                                                                           gggTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTc                                >  2:161248/1‑141 (MQ=255)

                                                                                                            ggTTAAAAGACTTTATCAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGACTTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCa                               >  1:387509/1‑141 (MQ=255)

                                                                                                             gTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCaa                              <  1:260104/141‑1 (MQ=255)

                                                                                                             gTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATGTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATAGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCaa                              <  2:58802/141‑1 (MQ=255)

                                                                                                              aaaagcccatacagagatgaagtttaatgtGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGCATTTTCATTCAGTCAac                             >  2:404864‑M1/31‑141 (MQ=255)

                                                                                                               tAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCAACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCAact                            >  1:344851/1‑141 (MQ=255)

                                                                                                                  aaGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCAactact                         <  1:991793/141‑1 (MQ=255)

                                                                                                                   ataCTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCAACTACTg                        >  2:482402/3‑141 (MQ=255)

                                                                                                                   aGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCAACTACTg                        <  2:613464/141‑1 (MQ=255)

                                                                                                                   aGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATAAAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCAACTACTg                        <  2:930003/141‑1 (MQ=255)

                                                                                                                       tttATTAAAGCTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATCGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCAACTACTGCCAt                    <  2:1054073/141‑1 (MQ=255)

                                                                                                                       tacagagatgaagtttaatgtGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGCATTTTCATTCAGTCAACTACTGCcaa                    >  2:832080‑M1/22‑140 (MQ=255)

                                                                                                                         tattaAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCGCCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCAACTACTGCCATta                  <  2:673557/141‑1 (MQ=255)

                                                                                                                         tattaAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCAACTACTGCCATta                  >  1:169233/1‑141 (MQ=255)

                                                                                                                          attaAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCAACTACTGCCATtat                 >  2:1087039/1‑141 (MQ=255)

                                                                                                                          attaAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCAACTACTGCCATtat                 >  1:358416/1‑141 (MQ=255)

                                                                                                                          attaAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCAACTACTGCCATtat                 <  1:615778/141‑1 (MQ=255)

                                                                                                                           ttaAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCAACTACTGCCATtata                >  2:467265/1‑141 (MQ=255)

                                                                                                                            taAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAAAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCAACTACTGCCATTATaa               <  2:389350/141‑1 (MQ=255)

                                                                                                                                aCTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCAACTACTGCCATTATAACttt           >  2:1006535/1‑141 (MQ=255)

                                                                                                                                  tCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCAACTACTGCCATTATAACTTTGt         >  1:1069542/1‑141 (MQ=255)

                                                                                                                                    aGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCAACTACTGCCATTATAACTTTGTag       >  1:76148/1‑141 (MQ=255)

                                                                                                                                       tattaGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCAACTACTGCCATTATAACTTTGTAGAGc    <  1:458141/141‑1 (MQ=255)

                                                                                                                                         ttaGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCAACTACTGCCATTATAACTTTGTAGAGCAt  <  2:925291/141‑1 (MQ=255)

TTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCATTGCAATTGCAAAATAATATTTAATGTGGGTTAAAAGACTTTATTAAAACTCAGTTATTAGGGAGTGGGACAGAAATGATATTTTCGTAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAA‑GCTTGTTACAAGCGAATTTTCGTTCAGTCAACTACTGCCATTATAACTTTGTAGAGCAT  >  CP000730/1072028‑1072305

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.