BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	1822865 =	93 (1.050)	5 (0.060)	5/240	NT	5.6%	intergenic (+186/+60)	USA300HOU_1697/ackA	possible universal stress protein/acetate kinase
*	?	CP000730	1822909 =	83 (1.010)	5 (0.060)	5/240	NT	5.6%	intergenic (+230/+16)	USA300HOU_1697/ackA	possible universal stress protein/acetate kinase

Only 100 of 110 total aligned reads displayed.

GCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTTTCTTCATCTGTTGGAATAACGACAACTTTAACT  >  CP000730/1822725‑1823003

gCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACaaaa                                                                                                                                               >  1:950592/1‑141 (MQ=255)

cttactacgtggtaaagaaggatttattaactatcctcattcaccagttaaagttgtcgttattccaacagatgaagaaagtatgattgcccgtgatgttatgacattcggtggtttaaaataatttttaaataaatatta                                                                                                                                               >  1:943766‑M1/141‑141 (MQ=255)

 cAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACaaaaa                                                                                                                                              >  2:665610/1‑141 (MQ=255)

  tactacgtggtaaagaaggatttattaactatcctcattcaccagttaaagttgtcgttattccaacagatgaagaaagtatgattgcccgtgatgttatgacattcggtggtttaaaataatttttaaataaatattAAg                                                                                                                                             >  2:637287‑M1/139‑141 (MQ=255)

  agaaagttGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAg                                                                                                                                             >  1:714648/8‑141 (MQ=255)

   gaaagttGCACTTGGTTTTTTATTGTTTATAAATAAAACTAACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATAAAAAAAGc                                                                                                                                            >  2:1072923/7‑141 (MQ=255)

    aaagttGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCg                                                                                                                                           >  2:759725/6‑141 (MQ=255)

      ttCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTc                                                                                                                                         <  1:240292/141‑1 (MQ=255)

      acgtggtaaagaaggatttattaactatcctcattcaccagttaaagttgtcgttattccaacagatgaagaaagtatgattgcccgtgatgttatgacattcggtggtttaaaataatttttaaataaatattAAGCGTc                                                                                                                                         <  1:550169‑M1/7‑1 (MQ=255)

      acgtggtaaagaaggatttattaactatcctcattcaccagttaaagttgtcgttattccaacagatgaagaaagtatgattgcccgtgatgttatgacattcggtggtttaaaataatttttaaataaatattAAGCGTc                                                                                                                                         >  1:1042128‑M1/135‑141 (MQ=255)

         tGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTAc                                                                                                                                      >  1:21170/1‑141 (MQ=255)

           cACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTAcct                                                                                                                                    >  1:139322/1‑141 (MQ=255)

              ttGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTAcctcc‑‑t                                                                                                                               >  1:648914/1‑141 (MQ=255)

              ttGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTAcctcc‑‑t                                                                                                                               >  2:696123/1‑141 (MQ=255)

                    ttttATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACatat                                                                                                                         <  1:480556/141‑1 (MQ=255)

                       tATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAt                                                                                                                      <  2:607805/141‑1 (MQ=255)

                          tGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGt                                                                                                                  <  1:383042/141‑1 (MQ=255)

                           gTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGACAAGCGCCATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTa                                                                                                                 >  1:644644/1‑141 (MQ=255)

                           gTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTa                                                                                                                 >  1:946766/1‑141 (MQ=255)

                              tatcctcattcaccagttaaagttgtcgttattccaacagatgaagaaagtatgattgcccgtgatgttatgacattcggtggtttaaaataattttcaaacaatacaaaAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCg                                                                                                              >  2:137449‑M1/111‑141 (MQ=255)

                              tataAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCg                                                                                                              >  2:880936/1‑141 (MQ=255)

                              tataAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGAGTCTACCTCC‑‑TACATATAAT‑TATATCg                                                                                                              >  2:855043/1‑141 (MQ=255)

                               tatcctcattcaccagttaaagttgtcgttattccaacagatgaagaaagtatgattgcccgtgatgttatgacattcggtggtttaaaataatttttaaataaatattAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCgg                                                                                                             >  1:151699‑M1/110‑141 (MQ=255)

                                taaataaaACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGga                                                                                                            <  1:833258/141‑1 (MQ=255)

                                    tcattcaccagttaaagttgtcgttattctaacagatgaagaaagtatgattgcccgtgatgttatgacattcggtggtttaaaataatttttaaataaatattAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATa                                                                                                        >  2:777578‑M1/105‑141 (MQ=255)

                                     aaaaCTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAg                                                                                                       <  1:52122/141‑1 (MQ=255)

                                     aaaaCTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAg                                                                                                       >  2:365467/1‑141 (MQ=255)

                                      gaaCTCACTGAAGCATTTTTTGATAATCTTCTTCAACTACTTAATTCATTAATAGATTCGTGGAAAGATACATTACGCTAGTTGATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑GACATATAAT‑TGGATCGGAGATAgg                                                                                                      >  2:269839/2‑140 (MQ=255)

                                      aaaCTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGa                                                                                                      >  2:734431/1‑141 (MQ=255)

                                         cTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGc                                                                                                   <  1:315440/141‑1 (MQ=255)

                                          tCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCCACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCt                                                                                                  >  1:502226/1‑141 (MQ=255)

                                            aCTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTa                                                                                                >  1:367140/1‑141 (MQ=255)

                                             cTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTaa                                                                                               >  1:930621/1‑141 (MQ=255)

                                               taataaTGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAata                                                                                             <  1:929927/141‑1 (MQ=255)

                                                aataatGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAatat                                                                                            >  2:49111/1‑141 (MQ=255)

                                                   actGTATTCATAACCTTCTTCGAGTACTTAATACTCTAAGATATTCGTGAAAAGAGACATTAAACTCGTTAATTTTCAACCAATACAAAAACAGTTCACCTCC‑‑TACCTATAAA‑TCTAGCGGAGATAGAAGCTTAAtatata                                                                                         >  2:256937/3‑141 (MQ=255)

                                                    atGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAAtatttat                                                                                        <  2:241724/141‑1 (MQ=255)

                                                     tGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAAtatttatt                                                                                       >  1:1018992/1‑141 (MQ=255)

                                                      gTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATatttattt                                                                                      >  2:552069/1‑141 (MQ=255)

                                                       ttttCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATAtttattta                                                                                     >  2:259328/1‑141 (MQ=255)

                                                       ttttCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATAtttattta                                                                                     <  2:937006/141‑1 (MQ=255)

                                                        tttCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTaa                                                                                    <  1:912371/141‑1 (MQ=255)

                                                           cATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACATCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTaaaaa                                                                                 >  1:1025061/1‑141 (MQ=255)

                                                            aTAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAat                                                                                <  1:205925/141‑1 (MQ=255)

                                                            aTAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAat                                                                                >  1:397721/1‑141 (MQ=255)

                                                              aaTCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAatta                                                                              >  2:1006749/1‑141 (MQ=255)

                                                              aaTCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTCAATATTTATTTAAAAatta                                                                              >  2:858471/1‑141 (MQ=255)

                                                                tcttctTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAattatt                                                                            <  1:746595/141‑1 (MQ=255)

                                                                tcttctTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAattatt                                                                            >  2:900766/1‑141 (MQ=255)

                                                                tcttctTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAattatt                                                                            >  2:131519/1‑141 (MQ=255)

                                                                 ttgttacGACTACTTAATTCTTTAAGATATGCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAattatgt                                                                           <  2:851682/135‑3 (MQ=255)

                                                                     ttcGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTaaa                                                                       >  1:540306/1‑141 (MQ=255)

                                                                        gACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAacca                                                                    <  2:21170/141‑1 (MQ=255)

                                                                          ctactTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAaccacc                                                                  <  2:1078427/141‑1 (MQ=255)

                                                                             ctTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGaa                                                               >  2:957973/1‑141 (MQ=255)

                                                                             ctTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGATTAATATTTCTTAAAAAATGATTTTAAACCACCGaa                                                               >  2:213653/1‑141 (MQ=255)

                                                                                aaTTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGt                                                            >  2:443665/1‑141 (MQ=255)

                                                                                aaTTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGt                                                            <  2:947523/141‑1 (MQ=255)

                                                                                    cTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATa                                                        >  2:132442/1‑141 (MQ=255)

                                                                                      ttAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAAc                                                      >  2:588481/1‑141 (MQ=255)

                                                                                       tAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACa                                                     >  2:876280/1‑141 (MQ=255)

                                                                                       tAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACa                                                     >  2:525491/1‑141 (MQ=255)

                                                                                        aaGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACAt                                                    <  1:295578/141‑1 (MQ=255)

                                                                                         aGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATc                                                   <  1:976083/141‑1 (MQ=255)

                                                                                            tatTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACg                                                <  2:1065772/141‑1 (MQ=255)

                                                                                             atTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACgg                                               <  1:1017170/141‑1 (MQ=255)

                                                                                              ttCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACggg                                              >  1:111879/1‑141 (MQ=255)

                                                                                              gatgttattacatttggttgtttaaaataatttttaaataaatattAAGCGTATACATAC‑‑TACATATAAT‑TGTAGTTGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACggg                                              >  2:900948‑M1/47‑141 (MQ=255)

                                                                                                cGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCa                                            >  1:418378/1‑141 (MQ=255)

                                                                                                  tGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAAt                                          <  2:671196/141‑1 (MQ=255)

                                                                                                  tGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAAt                                          >  1:40704/1‑141 (MQ=255)

                                                                                                     aaaGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCAAGGGCAATCAt                                       <  1:610914/141‑1 (MQ=255)

                                                                                                      aaGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATa                                      >  1:925050/1‑141 (MQ=255)

                                                                                                       agagACATTACACTAGTTAATTTTCAAACAATAGAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATAc                                     <  2:954038/141‑1 (MQ=255)

                                                                                                         agaCANTACACTAGTTAATTTTCAAACATTACAAACTGCGTCTACCCCC‑‑TGAATATAAT‑GTAAGTGGAGATAAAGGGTTAATATTTATTTAAAAATTATTTTAAACCACCGAAGGTCATAACATCACGGGCAATCATACtt                                   <  1:317636/141‑1 (MQ=255)

                                                                                                          gaCATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGCATGTCATAACATCACGGGCAATCATACttt                                  >  1:1033962/1‑141 (MQ=255)

                                                                                                           aCATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTttc                                 >  2:211032/1‑141 (MQ=255)

                                                                                                            cATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTttct                                <  1:624373/141‑1 (MQ=255)

                                                                                                            cATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTttct                                <  1:904880/141‑1 (MQ=255)

                                                                                                              ttACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTttcttc                              <  1:880936/141‑1 (MQ=255)

                                                                                                              ttACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTttcttc                              <  1:432685/141‑1 (MQ=255)

                                                                                                                acacTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTTTCTTCAt                            <  1:147804/141‑1 (MQ=255)

                                                                                                                 cacTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCGCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTTTCTTCATc                           <  2:687115/141‑1 (MQ=255)

                                                                                                                   cTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTTTCTTCATCTg                         >  2:932359/1‑141 (MQ=255)

                                                                                                                       ttAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTTTCTTCATCTGTTgg                     >  2:123265/1‑141 (MQ=255)

                                                                                                                          aTTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTTTCTTCATCTGTTGGAAt                  >  1:519758/1‑141 (MQ=255)

                                                                                                                           ttttCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTTTCTTCATCTGTTGGAATa                 <  2:1019978/141‑1 (MQ=255)

                                                                                                                           ttttCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTTTCTTCATCTGTTGGAATa                 <  1:85412/141‑1 (MQ=255)

                                                                                                                              tCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTTTCTTCATCTGTTGGAATAACg              <  1:1018620/141‑1 (MQ=255)

                                                                                                                               cAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTTTCTTCATCTGTTGGAATAACGa             <  1:206766/141‑1 (MQ=255)

                                                                                                                               cAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTTTCTTCATCTGTTGGAATAACGa             <  2:946766/141‑1 (MQ=255)

                                                                                                                                taaataaatattAAGCGTCTATCTCCGCTACA‑ATTATATGTAG‑‑GAGGTAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTTTCTTCATCTGTTGGAATAACGAc            <  2:374254‑M1/129‑1 (MQ=255)

                                                                                                                                aaaCAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTTTCTTCATCTGTTGGAATAACGAc            <  1:882978/141‑1 (MQ=255)

                                                                                                                                 aaCAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTTTCTTCATCTGTTGGAATAACGACa           <  2:893507/141‑1 (MQ=255)

                                                                                                                                    aaTACAAAAAGCGTCTACCTCC‑‑TACATATGAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTTTCTTCATCTGTTGGAATAACGACAACt        <  1:418087/141‑1 (MQ=255)

                                                                                                                                    aaTACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCAt                                                         >  1:54002/1‑92 (MQ=255)

                                                                                                                                    aaTACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCAt                                                         <  2:54002/92‑1 (MQ=255)

                                                                                                                                     aTACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGACTGTCATAACATCACGGGCAATCATACTTTCTTCATCTGTTGGAATAACGACAACtt       <  2:372557/141‑1 (MQ=255)

                                                                                                                                     aTACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTTTCTTCATCTGTTGGAATAACGACAACtt       <  2:887566/141‑1 (MQ=255)

                                                                                                                                          aaaaGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTTTCTTCATCTGTTGGAATAACGACAACTTTAACt  >  1:611078/1‑141 (MQ=255)

GCAACTTTCTGCACTTGGTTTTTTATTGTTTATAAATAAAACTCACTTAATAATGTTTTCATAATCTTCTTCGACTACTTAATTCTTTAAGATATTCGTGAAAAGAGACATTACACTAGTTAATTTTCAAACAATACAAAAAGCGTCTACCTCC‑‑TACATATAAT‑TGTAGCGGAGATAGACGCTTAATATTTATTTAAAAATTATTTTAAACCACCGAATGTCATAACATCACGGGCAATCATACTTTCTTCATCTGTTGGAATAACGACAACTTTAACT  >  CP000730/1822725‑1823003

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.