BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP000730	2,140,625	T→G	5.4%	E488A (GAA→GCA)	groEL ←	chaperone GroEL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP000730	2,140,625	0	T	G	5.4%	284.2 / 6.9	94	E488A (GAA→GCA)	groEL	chaperone GroEL
Reads supporting (aligned to +/- strand): ref base T (41/46); new base G (3/2); total (45/49)
Fisher's exact test for biased strand distribution p-value = 6.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01

Only 100 of 104 total aligned reads displayed.

CATGCCACCCATGTTAGGTTGGTCATTATTTTTTTCTGGAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCAGCAATTTGACGAACTGGTGCAGTTAATGCTTTA  >  CP000730/2140486‑2140765

cATGCCACCCATGTTAGGTTGGTCATTATTTTTTTCTTTTTTTTATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTTAGCGTGTTACTTTAGTTGGATCAACGATACcttc                                                                                                                                             >  2:695766/1‑141 (MQ=255)

 aTGCCACCCATGTTAGGTTGGTCATTATTTTTTTCTGGAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACcttct                                                                                                                                            <  1:854105/141‑1 (MQ=255)

 aTGCCACCCATGTTAGGTTGGTCATTATTTTTTTCTGGAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACcttct                                                                                                                                            <  2:661739/141‑1 (MQ=255)

  tGCCACCCATGTTAGGTTGGTCATTATTTTTTTCTGGCATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGGTGGATCAACGATACcttctt                                                                                                                                           >  2:1077823/1‑141 (MQ=255)

  tGCCACCCATGTTAGGTTGGTCATTATTTTTTTCTGGAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACcttctt                                                                                                                                           >  2:480194/1‑141 (MQ=255)

  tGCCACCCATGCTAGGTTGGTCATTATTTTTTTCTGGAGTTGATGCTACAACCGCTTCAGTCGTTCAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACcttctt                                                                                                                                           >  2:174838/1‑141 (MQ=255)

   gCCACCCATGTTAGGTTGGTCATTATTTTTTTCTGGAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCttcttc                                                                                                                                          >  1:878554/1‑141 (MQ=255)

      aCCCATGTTAGGTTGGTCATTATTTTTTTCTGGAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTaa                                                                                                                                       >  1:95664/1‑141 (MQ=255)

      aCCCATGTTAGGTTGGTCATTATTTTTTTCTGGAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTaa                                                                                                                                       <  2:88830/141‑1 (MQ=255)

      aCCCATGTTAGGTTGGTCATTATTTGTTTCTGGAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTaa                                                                                                                                       <  1:173776/141‑1 (MQ=255)

       cccATGTTAGGTTGGTCATTCTTTTTTTCTGGAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAAc                                                                                                                                      <  2:348956/141‑1 (MQ=255)

            gTTAGGTTGGTCATTATTTTTTTCTGGAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCACCACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATAtt                                                                                                                                 >  2:800291/1‑141 (MQ=255)

               aGGTTGGTCATTATTTTTTTCTGGAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAAc                                                                                                                              >  2:180255/1‑141 (MQ=255)

                ggTTGGTCATTATTTTTTTCTGGAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAAcc                                                                                                                             <  1:202176/141‑1 (MQ=255)

                      tCATTATTTTTTTCTGGAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCg                                                                                                                       <  1:924444/141‑1 (MQ=255)

                        attattTTTTTCTGGAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACGTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGtt                                                                                                                     <  2:572027/141‑1 (MQ=255)

                          tattTTTTTCTGGAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTg                                                                                                                   <  2:479919/141‑1 (MQ=255)

                           attTTTTTCTGGAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGt                                                                                                                  >  1:224476/1‑141 (MQ=255)

                           attTTTTTCTGGAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGt                                                                                                                  <  2:263254/141‑1 (MQ=255)

                           attTTTTTCTGGAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGt                                                                                                                  <  2:263370/141‑1 (MQ=255)

                                tttCTGGAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTagcag                                                                                                             <  2:61061/141‑1 (MQ=255)

                                 ttCTGGACTTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTagcagc                                                                                                            >  1:860042/1‑141 (MQ=255)

                                  tCTGGAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCg                                                                                                           >  1:912097/1‑141 (MQ=255)

                                   cTGGAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGt                                                                                                          <  1:947997/141‑1 (MQ=255)

                                      gAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTaa                                                                                                       <  2:1029296/141‑1 (MQ=255)

                                        aTTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTaaaa                                                                                                     <  1:154871/141‑1 (MQ=255)

                                         ttGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAAc                                                                                                    <  1:814621/141‑1 (MQ=255)

                                          tGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAAcc                                                                                                   <  1:960061/141‑1 (MQ=255)

                                             tGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAac                                                                                                >  2:479385/1‑141 (MQ=255)

                                              gCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAaca                                                                                               >  1:83872/1‑141 (MQ=255)

                                               cTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAacac                                                                                              >  2:543126/1‑141 (MQ=255)

                                               cTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAacac                                                                                              <  1:754804/141‑1 (MQ=255)

                                                 aCAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACAccc                                                                                            >  2:1009362/1‑141 (MQ=255)

                                                    aCCGCTTCAGTCGTTAAGGACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGc                                                                                         <  1:54566/141‑1 (MQ=255)

                                                    aCCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCAAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGc                                                                                         >  1:860122/1‑141 (MQ=255)

                                                     ccGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGct                                                                                        <  1:316948/141‑1 (MQ=255)

                                                      cGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGctc                                                                                       <  2:516886/141‑1 (MQ=255)

                                                       gCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGctct                                                                                      >  2:421330/1‑141 (MQ=255)

                                                       gCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGctct                                                                                      <  1:334904/141‑1 (MQ=255)

                                                         ttCAGTTGTTAAGAGCATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATAACTTCTTCTAACATATTAACCAACTCATTTGTAGCAGCGTTAAAACCATCACCCGGCTCTGc                                                                                    <  2:46938/141‑1 (MQ=255)

                                                           cAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGt                                                                                  >  1:375633/1‑141 (MQ=255)

                                                            aGTCGTTATGAACATTGCTCCAACACTTGCAGC‑ACGATGTAATGATGAGCGTGATACTTTCGTTGGATCAACGATACCTCCTTCTGACATATTAACCCACTGGTTCGTAGCAGCGCTAAAACCAACACCCGGCTCTGCgct                                                                                 >  2:206370/1‑139 (MQ=255)

                                                            aGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGtt                                                                                 >  1:1000655/1‑141 (MQ=255)

                                                             gTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGttt                                                                                >  2:820446/1‑141 (MQ=255)

                                                             gTCGTTAAGAACATTGCTGCAAAACTTGCAGC‑ATGTGGTAATGCTGAGCGTGTTACCTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACTCACTCGTTTGTAGCAGCGTTAAAATCAACAACCGGCTCTGCGttt                                                                                >  2:594647/1‑141 (MQ=255)

                                                              tCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGtttt                                                                               <  2:1025211/141‑1 (MQ=255)

                                                                 ttAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCa                                                                            <  1:437181/141‑1 (MQ=255)

                                                                    aGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAAc                                                                         <  2:906652/141‑1 (MQ=255)

                                                                    aGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAAc                                                                         <  2:906619/141‑1 (MQ=255)

                                                                      caacatgctgcAAGTGTTGCAGCAATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACg                                                                        >  1:697972/6‑141 (MQ=255)

                                                                      aaCATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGt                                                                       <  2:226059/141‑1 (MQ=255)

                                                                       aCATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACGTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGtt                                                                      <  1:284859/141‑1 (MQ=255)

                                                                         aTTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCt                                                                    <  2:731786/141‑1 (MQ=255)

                                                                            gctgcAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACa                                                                 >  1:517471/1‑141 (MQ=255)

                                                                              tgcAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAAt                                                               >  2:745762/1‑141 (MQ=255)

                                                                              tgcAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAAt                                                               >  1:629031/1‑141 (MQ=255)

                                                                               gcAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTGCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATa                                                              >  1:656462/1‑141 (MQ=255)

                                                                                caagtgttGCAGCAATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATa                                                              >  1:618279/7‑141 (MQ=255)

                                                                                 aagtgttGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAAc                                                            >  2:848242/6‑141 (MQ=255)

                                                                                 aagtgttGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTGTTTCAAACGTTCTACAATAAc                                                            >  1:1014516/6‑141 (MQ=255)

                                                                                  agtgttGCAGCAATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAAc                                                            >  1:653705/5‑141 (MQ=255)

                                                                                  agtgttGCAGC‑ATGTTGTAATGCTGAGAGTGTTCCTTTAGTTGGATCAACGATGCCTGCTTCTCACATATTAACCCACTCGTGTGTAGCAGCGTTAAAACCGACACCAGGCGCTGCGTCCATCAAACGTTCGCCAATAAcc                                                           >  2:159367/5‑140 (MQ=255)

                                                                                     cTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTCACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGaa                                                        <  1:643381/141‑1 (MQ=255)

                                                                                       tGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAAcc                                                      <  1:709732/141‑1 (MQ=255)

                                                                                       tGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAAcc                                                      >  2:674872/1‑141 (MQ=255)

                                                                                        gcagc‑aTGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCt                                                     <  1:1041043/141‑1 (MQ=255)

                                                                                        gcagc‑aTGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCt                                                     <  2:412636/141‑1 (MQ=255)

                                                                                         cagc‑aTGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCTAACGTTCTACAATAACAGAACCtt                                                    >  2:646513/1‑141 (MQ=255)

                                                                                         cagc‑aTGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCtt                                                    <  1:81510/141‑1 (MQ=255)

                                                                                         cagc‑aTGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTGCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCtt                                                    >  2:677668/1‑141 (MQ=255)

                                                                                          agc‑aTGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTc                                                   >  2:531077/1‑141 (MQ=255)

                                                                                           gc‑aTGTTGTAATGCTGAGTGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCt                                                  <  1:333299/141‑1 (MQ=255)

                                                                                            c‑aTGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTa                                                 >  2:355050/1‑141 (MQ=255)

                                                                                               tgttgtAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAAt                                               <  1:303096/141‑1 (MQ=255)

                                                                                                gttgtAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATc                                              <  2:618057/141‑1 (MQ=255)

                                                                                                gttgtAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATc                                              <  1:70899/141‑1 (MQ=255)

                                                                                                     aaTGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTACTCCTGCa                                         <  1:859526/141‑1 (MQ=255)

                                                                                                           gAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCa                                   >  1:226191/1‑141 (MQ=255)

                                                                                                            ggCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCAg                                  <  1:711078/140‑1 (MQ=255)

                                                                                                            aGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCAg                                  <  1:786266/141‑1 (MQ=255)

                                                                                                              cGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCAGCa                                >  2:886659/1‑141 (MQ=255)

                                                                                                                  ttACTTTAGTTGGATCAACGATACCTCCTTCTAACATATTAACCCGCTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTTCAATAGCAGAACCTTCTACTCCTGCATTTTCAGCAAttt                            <  2:101412/141‑1 (MQ=255)

                                                                                                                   tACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCAGCAATTTg                           >  2:513833/1‑141 (MQ=255)

                                                                                                                         aGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCAGCAATTTGACGAAc                     <  2:494780/141‑1 (MQ=255)

                                                                                                                          gTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCAGCCATTTGACGAACt                    >  2:22556/1‑141 (MQ=255)

                                                                                                                            tGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCAGCAATTTGACGAACTgg                  <  2:224476/141‑1 (MQ=255)

                                                                                                                              gATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCAGCAATTTGACGAACTGGTg                <  2:818848/141‑1 (MQ=255)

                                                                                                                              gATCAACGATACCTGCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCAGCAATTTGACGAACTGGTg                <  1:355930/141‑1 (MQ=255)

                                                                                                                               aTCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCAGCAATTTGACGAACTGGTGc               >  1:460040/1‑141 (MQ=255)

                                                                                                                               aTCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCAGCAATTTGACGAACTGGTGc               >  2:455513/1‑141 (MQ=255)

                                                                                                                               aTCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCAGCAATTTGACGAACTGGTGc               >  2:751457/1‑141 (MQ=255)

                                                                                                                                   aCGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCAGCAATTTGACGAACTGGTGCAGtt           >  1:255494/1‑141 (MQ=255)

                                                                                                                                   aCGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCAGCAATTTGACGAACTGGTGCAGtt           <  1:611369/141‑1 (MQ=255)

                                                                                                                                    cGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCAGCAATTTGACGAACTGGTGCAGTTa          >  1:132352/1‑141 (MQ=255)

                                                                                                                                    cGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCAGCAATTTGACGAACTGGTGCAGTTa          <  2:840211/141‑1 (MQ=255)

                                                                                                                                    cGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCAGCAATTTGACGAACTGGTGCAGTTa          >  1:900924/1‑141 (MQ=255)

                                                                                                                                     gATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCAGCAATTTGACGAACTGGTGCaacaag         >  1:790115/1‑136 (MQ=255)

                                                                                                                                           ttcttcTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCAGCAATTTGACGAACTGGTGCAGTTAATGCttt   >  2:605323/1‑141 (MQ=255)

                                                                                                                                            tcttctAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCTTACTTTCTACAATAACAGAACCTTCTAATCCTTCATTTTCAGCAATTTGACGAACTGGTGCAGTTAATGCTTTa  >  2:4740/1‑141 (MQ=255)

                                                                                                                                            tcttctAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCAGCAATTTGACGAACTGGTGCAGTTAATGCTTTa  <  2:714406/141‑1 (MQ=255)

CATGCCACCCATGTTAGGTTGGTCATTATTTTTTTCTGGAATTGATGCTACAACCGCTTCAGTCGTTAAGAACATTGCTGCAACACTTGCAGC‑ATGTTGTAATGCTGAGCGTGTTACTTTAGTTGGATCAACGATACCTTCTTCTAACATATTAACCCACTCGTTTGTAGCAGCGTTAAAACCAACACCCGGCTCTGCGTTTTTCAAACGTTCTACAATAACAGAACCTTCTAATCCTGCATTTTCAGCAATTTGACGAACTGGTGCAGTTAATGCTTTA  >  CP000730/2140486‑2140765

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`