| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 2,620,750 | A→T | 5.7% | intergenic (+47/‑97) | USA300HOU_2483 → / → USA300HOU_2484 | hypothetical protein/hypothetical membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 2,620,750 | 0 | A | T | 5.7% | 250.6 / 3.5 | 81 | intergenic (+47/‑97) | USA300HOU_2483/USA300HOU_2484 | hypothetical protein/hypothetical membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (38/38); new base T (2/3); total (40/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AATTTAGCGTCTCTAGATTTATACGCTCCTGTTCGTAACATTACTTCTAGTCGTGATATTCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACATCGTATTTAGTATCGTATTCTGCATAAG > CP000730/2620614‑2620887 | aaTTTAGCGTCTCTAGATTTATACGCTCCTGTTCGTAACATTACTTCTAGTCGTGATATTCATCCCAATTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAAAAAATAAAAAAAAAAATGAt < 2:600577/141‑1 (MQ=255) gCGTCTCTAGATTTATACGCTCCTGTTCGTAACATTACTTCTAGTCGTGATATTCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAAc < 1:563796/141‑1 (MQ=255) gCGTCTCTAGATTTATACGCTCCTGTTCGTAACATTACTTCTAGTCGTGATATTCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAAc > 1:722662/1‑141 (MQ=255) ctctAGATTTATACGCTTCTGTTCGTAACATTACTTCTAGTCGTGATATTCATCCCATTTAATTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTAc < 2:223588/141‑1 (MQ=255) tAGATTTATACGCTCCTGTTCGTAACATTACTTCTAGTCGTGATATTCATCCCACTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAAAAAAAAAAAAAAAAATTGATAAAAAcagtacgt < 2:442967/141‑8 (MQ=255) aGATTTATACGCTCCTGTTCGTAACATTACTTCTAGTCGTGATATTCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑tt < 1:986059/141‑1 (MQ=255) ttATACGCTCCTGTTCGTAACATTACTTCTAGTCGTTATATTCATCCCATTTATTTCATGACAAAAGAATAAAACTCCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑tttttt < 2:611853/141‑1 (MQ=255) ataCGCTCCTGTTCGTAACATTACTTCTAGTCGTGATATTCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAg < 2:1026475/141‑1 (MQ=255) cgcgcttgttgttAACATTACTTCTAGTCGTGATATTCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCATCTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGaac < 2:1024600/129‑2 (MQ=255) cGCTCCTGTTCGTAACATTACTTCTAGTCGTGATATTCATCCCATTTATTTCATGGCAAGGGGTTGGAATATGCCTTTTCACAACCCTATGCGCTCGACTAGTAAATGAAAAAATGATAAAAACGTACTG‑TTTTTTAGaaa > 1:376892/1‑141 (MQ=255) tCCTGTTCGTAACATTACTTCTAGTCGTGATATTCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAacat < 1:945133/141‑1 (MQ=255) tCCTGTTCGTAACATTACGTCTAGTCGTGATATTCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAacat < 2:845472/141‑1 (MQ=255) ccTGTTCGTAACATTACTTCTAGTCGTGATATTCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAacata < 1:788874/141‑1 (MQ=255) cGTAACATTACTTCTAGTCGTGATATTCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACatata > 1:200142/1‑141 (MQ=255) gTAACATTACTTCTAGTCGTGATATTCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACatatat > 2:91669/1‑141 (MQ=255) tAACATTACTTCTAGTCGTGATATTCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACAtatata > 2:85099/1‑141 (MQ=255) aaCATTACTTCTAGTCGTGATATTCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAGCGTACTG‑TTTTTTAGAAACATACATATATaa < 1:533388/141‑1 (MQ=255) aTTACTTCTAGTCGTGATATTCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGaa > 2:490782/1‑141 (MQ=255) cTTCTAGTCGTGATATTCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAATTGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGATACGc > 2:901082/1‑141 (MQ=255) tCTAGTCGTGATATTCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCAt > 1:542865/1‑141 (MQ=255) tCTAGTCGTGATATTCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCAt < 2:878516/141‑1 (MQ=255) tAGTCGTGATATTCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATcc < 2:539296/141‑1 (MQ=255) tAGTCGTGATATTCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTACATAACCCCATTCATTCAACTAATAAATAAAAAATTGATAAAAACGTACTG‑CTTTTTAGAAACATACATATATAAGATACGCAttc < 1:546027/141‑3 (MQ=255) tCGTGATATTCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCAtt < 2:773043/141‑1 (MQ=255) gTGATATTCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTAc < 2:514208/141‑1 (MQ=255) tCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGa < 1:122799/141‑1 (MQ=255) tCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAg > 1:356797/1‑141 (MQ=255) tCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAg < 1:594225/141‑1 (MQ=255) cccATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGt > 1:294580/1‑141 (MQ=255) cATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTGTTTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTa < 2:621664/141‑1 (MQ=255) tttatttCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACAt > 2:532070/1‑141 (MQ=255) atttCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATtat > 1:984258/1‑141 (MQ=255) atttCATAACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAAAAAAAAAAATAAAAATTGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGATACGCATTCATTACTAAAAGACAGTACATtat < 2:913362/141‑1 (MQ=255) tttCATGACAAAAGATTAAAACTTCCTTTTTCATAGCCCCATTCATGCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATtata > 1:948362/1‑141 (MQ=255) ttCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGCACATTatat < 1:953977/141‑1 (MQ=255) tCATGACAAAAGATTAAAACTTCCTTTTTTATTTTTTCTTTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATAtt > 2:516999/1‑141 (MQ=255) cATGACAAAAGGTTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATTCCTATATAAGAAACGCATCCATTACTAAAAGCCAGTACATtatctcc > 2:285/1‑137 (MQ=255) cATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTc < 1:397407/141‑1 (MQ=255) cATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTc < 2:476897/141‑1 (MQ=255) aTGACAAAAGATTAAANCTTCCTTTTTCANAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCt > 1:677268/1‑141 (MQ=255) aTGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAAAGCATCCATTACTAAAAGACAGTACATTATAtttt > 1:779476/1‑139 (MQ=255) aaaaGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAg > 1:22250/1‑141 (MQ=255) aaGATTAAAACTTCCTTTTTTTTTTTTTTTTTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGa > 2:661761/1‑141 (MQ=255) aaGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAATGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGa < 2:1020461/141‑1 (MQ=255) aaGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGa > 1:308390/1‑141 (MQ=255) aGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAACACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGaa < 1:57477/141‑1 (MQ=255) aTTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAgg > 1:717583/1‑141 (MQ=255) aTTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAgg < 2:160121/141‑1 (MQ=255) ttAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGt > 2:128899/1‑141 (MQ=255) ttAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGt < 1:929231/141‑1 (MQ=255) aaaCTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGca > 1:1003111/1‑141 (MQ=255) aaaCTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGca > 2:465307/1‑141 (MQ=255) cttgcttgTTCATAGCCGCATTCATTGATGTTATAAATTAAAAAATGATAAAGACGTACTG‑TTTTTTAGAAACATACATATATGAGAGACGCGTCCATTACTAAAAGATGGTACATTATATTCTATCAGGAAGGTGcaaca < 2:22162/141‑1 (MQ=255) cTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGa > 1:686938/1‑141 (MQ=255) ttttCATAATCCCATTCATAAAACTAATAAATGAAAAATTGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGATACGCATTCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGAcc > 2:865505/1‑141 (MQ=255) ttttCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAGGGTGCAACAATGAcc < 2:273448/141‑1 (MQ=255) ttCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGt < 2:686780/141‑1 (MQ=255) aCCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTTGTAATTTTCATATATAAGAAACGTATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGTTTCAACAATGATCGTCAACAt > 2:984648/1‑141 (MQ=255) aCCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACAt > 1:365509/1‑141 (MQ=255) aCCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACAt > 2:984641/1‑141 (MQ=255) aCCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACAt > 2:321347/1‑141 (MQ=255) cattcattCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACATCGTa < 2:382797/141‑1 (MQ=255) cattcattCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACATCGTa < 1:856742/141‑1 (MQ=255) cattcattCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACATCGTa < 2:713561/141‑1 (MQ=255) cattcattCAAATAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCAACAATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACATCGTa < 2:456810/141‑1 (MQ=255) attcattcAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACATCGTAt > 2:26581/1‑141 (MQ=255) ttcattcaACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACATCGTAtt > 2:105264/1‑141 (MQ=255) tcattcaACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACATCGTAttt > 1:62467/1‑141 (MQ=255) cattcaACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTTTTTTCTTACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACATCGTATTTa > 2:336766/1‑141 (MQ=255) cattcaACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCGTCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACATCGTATTTa > 1:641841/1‑141 (MQ=255) attcaACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAACCGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACATCGTATTTAg < 1:919646/141‑1 (MQ=255) ttcaACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACATCGTATTTAGt < 2:656063/141‑1 (MQ=255) tcaACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGGAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACATCGTATTTAGTa < 2:531643/141‑1 (MQ=255) tcaACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACATCGTATTTAGTa > 2:259926/1‑141 (MQ=255) tcaACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACATCGTATTTAGTa < 2:225392/141‑1 (MQ=255) tcaACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATAAATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTATATCAGGAAGGTGCAACAATGACCGTCAACATCGTATTTAGTa > 2:149586/1‑141 (MQ=255) cTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACATCGTATTTAGTATCGt > 1:883226/1‑141 (MQ=255) aataaATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACATCGTATTTAGTATCGTAt < 2:717583/141‑1 (MQ=255) ataaATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACAt < 2:616259/84‑1 (MQ=255) ataaATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACAt > 1:616259/1‑84 (MQ=255) aTTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGAAACAATGACCGTCAACATCGTATTTAGTATCGTATTCTGc > 2:321541/1‑141 (MQ=255) aaaaaaTGATAAAAACGTACTG‑TTTTTTTTTTTTTTTTTTATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACATCATATTTAGTATCGAATTCTGCAtt > 2:4180/1‑140 (MQ=255) aaaaTGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACATCGTATTTAGTATCGTATTCTGCATAAg > 1:1436/1‑141 (MQ=255) | AATTTAGCGTCTCTAGATTTATACGCTCCTGTTCGTAACATTACTTCTAGTCGTGATATTCATCCCATTTATTTCATGACAAAAGATTAAAACTTCCTTTTTCATAACCCCATTCATTCAACTAATAAATTAAAAAATGATAAAAACGTACTG‑TTTTTTAGAAACATACATATATAAGAAACGCATCCATTACTAAAAGACAGTACATTATATTCTATCAGGAAGGTGCAACAATGACCGTCAACATCGTATTTAGTATCGTATTCTGCATAAG > CP000730/2620614‑2620887 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |