| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 2368663 = | 62 (0.930) | 5 (0.080) | 4/254 | 8.3 | 7.3% | intergenic (‑1780/+3778) | rpmC/pbuG | ribosomal protein L29/NCS2 family nucleobase:cation symporter‑2 |
| ? | CP000730 | 2368705 = | 67 (1.050) | intergenic (‑1822/+3736) | rpmC/pbuG | ribosomal protein L29/NCS2 family nucleobase:cation symporter‑2 | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGTCACCATGGGGTAAACCTACGCTTGGTAAGAAAACTCGTCGTGGTAAAAAATCATCAGACAAACTTATCGTTCGTGGACGTAAGAAAAAATAATATAATCAACTTATTTGGGTGTGCGGCTTAAAGCTGCACGCACATAATAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/2368808‑2368663‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aataagTTGATTATATTATTTTTTCTTACGTCCACGAACGATAAGTTTGTCTGATGATTTTTTACCACGACGAGTTTTCTTACCAAGCGTAGGTTTACCCCATGGTGACATTGGAGATGGTCTACCGATAGGAGCACGACC > CP000730/2368705‑2368839 TGTCACCATGGGGTAAACCTACGCTTGGTAAGAAAACTCGTCGTGGTAAAAAATCATCAGACAAACTTATCGTTCGTGGACGTAAGAAAAAATAATATAATCAACTTATTTGGGTGTGCGGCTTAAAGCTGCACGCACATA < 2:86983/141‑1TGTCACCATGGGGTAAACCTACGCTTGGTAAGAAAACTCGTCGTGGTAAAAAATCATCAGACAAACTTATCGTTCGTGGACGTAAGAAAAAATAATATAATCAACTTATTTGGGTGTGCGGCTTAAAGCTGCACGCACATA > 1:32908/1‑141TGTCACCATGGGGTAAACCTACGCTTGGTAAGAAAACTCGTCGTGGTAAAAAATCATCAGACAAACTTATCGTTCGTGGACGTAAGAAAAAATAATATAATCAACTTATTTGGGTGTGCGGCTTAAAGCTGCACGCACATA > 2:298251/1‑141 GTCACCATGGGGTAAACCTACGCTTGGTAAGAAAACTCGTCGTGGTAAAAAATCATCAGACAAACTTATCGTTCGTGGACGTAAGAAAAAATAATATAATCAACTTATTTGGGTGTGCGGCTTAAAGCTGCACGCACATAA > 2:694679/1‑141 ttattatcattactCCTCCGCTTGGTAAGAAAACTCGTCGTGGTAAAAAATCATCAGACAAACTTATCGTTCGTGGACGTAAGAAAAAATAATATAATCAACTTATTTGGGTGTGCGGCTTAAAGCTGCACGCACATAATA < 1:671774/127‑1 CACCATGGGGTAAACCTACGCTTGGTAAGAAAACTCGTCGTGGTAAAAAATCATCAGACAAACTTATCGTTCGTGGACGTAAGAAAAAATAATATAATCAACTTATTTGGGTGTGCGGCTTAAAGCTGCACGCACATAATA < 1:164957/141‑1 ACCATGGGGTAAACCTACGCTTGGTAAGAAAACTCGTCGTGGTAAAAAATCATCAGACAAACTTATCGTTCGTGGACGTAAGAAAAAATAATATAATCAACTTATTTGGGTGTGCGGCTTAAAGCTGCACGCACATAATAA > 2:2544/1‑141 ACCATGGGGTAAACCTACGCTTGGTAAGAAAACTCGTCGTGGTAAAAAATCATCAGACAAACTTATCGTTCGTGGACGTAAGAAAAAATAATATAATCAACTTATTTGGGTGTGCGGCTTAAAGCTGCACGCACATAATAA > 2:2547/1‑141 ATATAATCAACTTATTTGGGTGTGCGGCTTAAAGCTGCACGCACATAATAAGTTGATTATATTATTTTTTCTTACGTCCACGAACGATAAGTTTGTCTGATGATTTTTTACCACGACGAGTTTTCTTACCAAGCGTAGGTT > 2:663173/1‑141 ATTTGGGTGTGCGGCTTAAAGCTGCACGCACATAATAAGTTGATTATATTATTTTTTCTTACGTCCACGAACGATAAGTTTGTCTGATGATTTTTTACCACGACGAGTTTTCTTACCAAGCGTAGGTTTACCCCATGGTGA > 1:304152/1‑141 TTGGGTGTGCGGCTTAAAGCTGCACGCACATAATAAGTTGATTATATTATTTTTTCTTACGTCCACGAACGATAAGTTTGTCTGATGATTTTTTACCACGACGAGTTTTCTTACCAAGCGTAGGTTTACCCCATGGTGACA > 2:411068/1‑141 GGGTGTGCGGCTTAAAGCTGCACGCACATAATAAGTTGATTATATTATTTTTTCTTACGTCCACGAACGATAAGTTTGTCTGATGATTTTTTACCACGACGAGTTTTCTTACCAAGCGTAGGTTTACCCCATGGTGACATT > 1:428306/1‑141 GGGTGTGCGGCTTAAAGCTGCACGCACATAATAAGTTGATTATATTATTTTTTCTTACGTCCACGAACGATAAGTTTGTCTGATGATTTTTTACCACGACGAGTTTTCTTACCAAGCGTAGGTTTACCCCATGGTGACATT > 1:544444/1‑141 AATAAGTTGATTATATTATTTTTTCTTACGTCCACGAACGATAAGTTTGTCTGATGATTTTTTACCACGACGAGTTTTCTTACCAAGCGTAGGTTTACCCCATGGTGACATTGGAGATGGTCTACCGATAGGAGCACGACC > 1:80949/1‑141 AGTTGATTATATTATTTTTTCTTACGTCCACGAACGATAAGTTTGTCTGATGATTTTTTACCACGACGAGTTTTC < 1:356083/75‑1 AGTTGATTATATTATTTTTTCTTACGTCCACGAACGATAAGTTTGTCTGATGATTTTTTACCACGACGAGTTTTC > 2:356083/1‑75 TGTCACCATGGGGTAAACCTACGCTTGGTAAGAAAACTCGTCGTGGTAAAAAATCATCAGACAAACTTATCGTTCGTGGACGTAAGAAAAAATAATATAATCAACTTATTTGGGTGTGCGGCTTAAAGCTGCACGCACATAATAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/2368808‑2368663‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aataagTTGATTATATTATTTTTTCTTACGTCCACGAACGATAAGTTTGTCTGATGATTTTTTACCACGACGAGTTTTCTTACCAAGCGTAGGTTTACCCCATGGTGACATTGGAGATGGTCTACCGATAGGAGCACGACC > CP000730/2368705‑2368839 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |